RNA–Protein interactions for RNA: ENST00000361490.8

HPS1-204, Transcript of HPS1, biogenesis of lysosomal organelles complex 3 subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HPS1, Length 3,678 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS1-204ENST00000361490 CHN1P15882 459 aa12.03□□□□□ -0.48
HPS1-204ENST00000361490 TPH1P17752 444 aa12.03□□□□□ -0.48
HPS1-204ENST00000361490 ERCC2P18074 760 aa12.03□□□□□ -0.48
HPS1-204ENST00000361490 CDH5P33151 784 aaPredicted RBP12.03□□□□□ -0.48
HPS1-204ENST00000361490 PCK1P35558 622 aa12.03□□□□□ -0.48
HPS1-204ENST00000361490 MAP2K2P36507 400 aa12.03□□□□□ -0.48
HPS1-204ENST00000361490 IRAK1P51617 712 aa12.03□□□□□ -0.48
HPS1-204ENST00000361490 HNRNPH2P55795 449 aaKnown RBP12.03□□□□□ -0.48
HPS1-204ENST00000361490 INTS6LQ5JSJ4 861 aaKnown RBP12.03□□□□□ -0.48
HPS1-204ENST00000361490 ALKAL1Q6UXT8 129 aa12.03□□□□□ -0.48
HPS1-204ENST00000361490 POLNQ7Z5Q5 900 aa12.03□□□□□ -0.48
HPS1-204ENST00000361490 CDKL3Q8IVW4 592 aaPredicted RBP12.03□□□□□ -0.48
HPS1-204ENST00000361490 PPIL6Q8IXY8 311 aa12.03□□□□□ -0.48
HPS1-204ENST00000361490 RUBCNQ92622 972 aa12.03□□□□□ -0.48
HPS1-204ENST00000361490 PAWRQ96IZ0 340 aaKnown RBP12.03□□□□□ -0.48
HPS1-204ENST00000361490 CSPG4P5Q96PW8 444 aa12.03□□□□□ -0.48
HPS1-204ENST00000361490 TMBIM4Q9HC24 238 aa12.03□□□□□ -0.48
HPS1-204ENST00000361490 ZC3H7BQ9UGR2 993 aaKnown RBP12.03□□□□□ -0.48
HPS1-204ENST00000361490 C9IYK1 514 aa12.03□□□□□ -0.48
HPS1-204ENST00000361490 WARSP23381 471 aaKnown RBP12.03□□□□□ -0.48
HPS1-204ENST00000361490 ELK3P41970 407 aa12.03□□□□□ -0.48
HPS1-204ENST00000361490 SARNPP82979 210 aaKnown RBP12.03□□□□□ -0.48
HPS1-204ENST00000361490 POU5F1Q01860 360 aaKnown RBP12.03□□□□□ -0.48
HPS1-204ENST00000361490 ARHGAP17Q68EM7 881 aa12.03□□□□□ -0.48
HPS1-204ENST00000361490 FOXR1Q6PIV2 292 aa12.03□□□□□ -0.48
HPS1-204ENST00000361490 ART4Q93070 314 aa12.03□□□□□ -0.48
HPS1-204ENST00000361490 TRIM56Q9BRZ2 755 aaKnown RBP12.03□□□□□ -0.48
HPS1-204ENST00000361490 GPR62Q9BZJ7 368 aa12.03□□□□□ -0.48
HPS1-204ENST00000361490 IL1RAPL1Q9NZN1 696 aa12.03□□□□□ -0.48
HPS1-204ENST00000361490 ZKSCAN7Q9P0L1 754 aaPredicted RBP12.03□□□□□ -0.48
HPS1-204ENST00000361490 PMPCBO75439 489 aa12.02□□□□□ -0.48
HPS1-204ENST00000361490 CREB1P16220 341 aa12.02□□□□□ -0.48
HPS1-204ENST00000361490 ECHS1P30084 290 aa12.02□□□□□ -0.48
HPS1-204ENST00000361490 CAV1Q03135 178 aa12.02□□□□□ -0.48
HPS1-204ENST00000361490 MAPRE1Q15691 268 aaKnown RBP12.02□□□□□ -0.48
HPS1-204ENST00000361490 SLC25A52Q3SY17 297 aa12.02□□□□□ -0.48
HPS1-204ENST00000361490 SYDE1Q6ZW31 735 aaPredicted RBP12.02□□□□□ -0.48
HPS1-204ENST00000361490 KLHDC9Q8NEP7 349 aa12.02□□□□□ -0.48
HPS1-204ENST00000361490 FNIP1Q8TF40 1166 aa12.02□□□□□ -0.48
HPS1-204ENST00000361490 PDCD6IPQ8WUM4 868 aaKnown RBP12.02□□□□□ -0.48
HPS1-204ENST00000361490 CABS1Q96KC9 395 aa12.02□□□□□ -0.48
HPS1-204ENST00000361490 SMC6Q96SB8 1091 aa12.02□□□□□ -0.48
HPS1-204ENST00000361490 PRMT1Q99873 361 aaKnown RBP12.02□□□□□ -0.48
HPS1-204ENST00000361490 TMEM106CQ9BVX2 250 aa12.02□□□□□ -0.48
HPS1-204ENST00000361490 ETNK1Q9HBU6 452 aa12.02□□□□□ -0.48
HPS1-204ENST00000361490 PCDH9Q9HC56 1237 aa12.02□□□□□ -0.48
HPS1-204ENST00000361490 ZDHHC18Q9NUE0 388 aa12.02□□□□□ -0.48
HPS1-204ENST00000361490 KANSL3Q9P2N6 904 aa12.02□□□□□ -0.48
HPS1-204ENST00000361490 PCDHB5Q9Y5E4 795 aa12.02□□□□□ -0.48
HPS1-204ENST00000361490 A0A1W2PQH9 124 aa12.02□□□□□ -0.49
HPS1-204ENST00000361490 GOLGA8TH3BQL2 631 aa12.02□□□□□ -0.49
HPS1-204ENST00000361490 ATP5DP30049 168 aa12.02□□□□□ -0.49
HPS1-204ENST00000361490 STIP1P31948 543 aaKnown RBP12.02□□□□□ -0.49
HPS1-204ENST00000361490 RTN4RL1Q86UN2 441 aaPredicted RBP12.02□□□□□ -0.49
HPS1-204ENST00000361490 ZDHHC17Q8IUH5 632 aa12.02□□□□□ -0.49
HPS1-204ENST00000361490 DIS3LQ8TF46 1054 aaKnown RBP12.02□□□□□ -0.49
HPS1-204ENST00000361490 RPRD1AQ96P16 312 aaPredicted RBP12.02□□□□□ -0.49
HPS1-204ENST00000361490 ADAM28Q9UKQ2 775 aa12.02□□□□□ -0.49
HPS1-204ENST00000361490 DSEQ9UL01 958 aa12.02□□□□□ -0.49
HPS1-204ENST00000361490 A0A087WUV0 522 aaPredicted RBP12.02□□□□□ -0.49
HPS1-204ENST00000361490 DAOAP59103 153 aa12.02□□□□□ -0.49
HPS1-204ENST00000361490 PDE1BQ01064 536 aa12.02□□□□□ -0.49
HPS1-204ENST00000361490 CLLU1OSQ5K130 101 aa12.02□□□□□ -0.49
HPS1-204ENST00000361490 PPP1R15BQ5SWA1 713 aa12.02□□□□□ -0.49
HPS1-204ENST00000361490 NUGGCQ68CJ6 796 aa12.02□□□□□ -0.49
HPS1-204ENST00000361490 TRMT10CQ7L0Y3 403 aaKnown RBP12.02□□□□□ -0.49
HPS1-204ENST00000361490 COLGALT1Q8NBJ5 622 aa12.02□□□□□ -0.49
HPS1-204ENST00000361490 FBF1Q8TES7 1133 aa12.02□□□□□ -0.49
HPS1-204ENST00000361490 KIF9Q9HAQ2 790 aa12.02□□□□□ -0.49
HPS1-204ENST00000361490 SLC12A6Q9UHW9 1150 aa12.02□□□□□ -0.49
HPS1-204ENST00000361490 ENPP3O14638 875 aa12.01□□□□□ -0.49
HPS1-204ENST00000361490 APOEP02649 317 aa12.01□□□□□ -0.49
HPS1-204ENST00000361490 LRPAP1P30533 357 aa12.01□□□□□ -0.49
HPS1-204ENST00000361490 ADRA1BP35368 520 aa12.01□□□□□ -0.49
HPS1-204ENST00000361490 ABCG1P45844 678 aa12.01□□□□□ -0.49
HPS1-204ENST00000361490 IFT88Q13099 833 aa12.01□□□□□ -0.49
HPS1-204ENST00000361490 OLIG2Q13516 323 aa12.01□□□□□ -0.49
HPS1-204ENST00000361490 IKBKEQ14164 716 aa12.01□□□□□ -0.49
HPS1-204ENST00000361490 MBTPS1Q14703 1052 aa12.01□□□□□ -0.49
HPS1-204ENST00000361490 EFTUD2Q15029 972 aaKnown RBP eCLIP12.01□□□□□ -0.495e-9■■■■■ 60.9
HPS1-204ENST00000361490 CHSY1Q86X52 802 aa12.01□□□□□ -0.49
HPS1-204ENST00000361490 CMASQ8NFW8 434 aaPredicted RBP12.01□□□□□ -0.49
HPS1-204ENST00000361490 PAK5Q9P286 719 aa12.01□□□□□ -0.49
HPS1-204ENST00000361490 LOXHD1Q8IVV2 1947 aa12.01□□□□□ -0.49
HPS1-204ENST00000361490 TMEM120BA0PK00 339 aa12.01□□□□□ -0.49
HPS1-204ENST00000361490 FAM72CH0Y354 149 aa12.01□□□□□ -0.49
HPS1-204ENST00000361490 RNF103O00237 685 aa12.01□□□□□ -0.49
HPS1-204ENST00000361490 MFSD11O43934 449 aa12.01□□□□□ -0.49
HPS1-204ENST00000361490 GABBR2O75899 941 aa12.01□□□□□ -0.49
HPS1-204ENST00000361490 MT-ND3P03897 115 aa12.01□□□□□ -0.49
HPS1-204ENST00000361490 F7P08709 466 aaPredicted RBP12.01□□□□□ -0.49
HPS1-204ENST00000361490 KLF1Q13351 362 aaPredicted RBP12.01□□□□□ -0.49
HPS1-204ENST00000361490 NFE2Q16621 373 aaPredicted RBP12.01□□□□□ -0.49
HPS1-204ENST00000361490 FAM72AQ5TYM5 149 aa12.01□□□□□ -0.49
HPS1-204ENST00000361490 FAM72DQ6L9T8 149 aa12.01□□□□□ -0.49
HPS1-204ENST00000361490 LRRC31Q6UY01 552 aa12.01□□□□□ -0.49
HPS1-204ENST00000361490 LIN28BQ6ZN17 250 aaKnown RBP eCLIP12.01□□□□□ -0.492e-7■■■■□ 24.7
HPS1-204ENST00000361490 BZW1Q7L1Q6 419 aaKnown RBP12.01□□□□□ -0.49
HPS1-204ENST00000361490 PCGF5Q86SE9 256 aa12.01□□□□□ -0.49
HPS1-204ENST00000361490 FAM72BQ86X60 149 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.5 ms