RNA–Protein interactions for RNA: ENST00000361367.6

CTR9-201, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CTR9, Length 4,586 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-201ENST00000361367 SUPT3HO75486 399 aa14.28□□□□□ -0.12
CTR9-201ENST00000361367 CRTAMO95727 393 aa14.28□□□□□ -0.12
CTR9-201ENST00000361367 GNRH1P01148 92 aa14.28□□□□□ -0.12
CTR9-201ENST00000361367 C4BPAP04003 597 aaKnown RBP14.28□□□□□ -0.12
CTR9-201ENST00000361367 PSEN1P49768 467 aa14.28□□□□□ -0.12
CTR9-201ENST00000361367 CSE1LP55060 971 aaKnown RBP14.28□□□□□ -0.12
CTR9-201ENST00000361367 SNCBQ16143 134 aa14.28□□□□□ -0.12
CTR9-201ENST00000361367 TTLL9Q3SXZ7 439 aa14.28□□□□□ -0.12
CTR9-201ENST00000361367 SDHAF4Q5VUM1 108 aa14.28□□□□□ -0.12
CTR9-201ENST00000361367 HIPK4Q8NE63 616 aa14.28□□□□□ -0.12
CTR9-201ENST00000361367 NPLOC4Q8TAT6 608 aa14.28□□□□□ -0.12
CTR9-201ENST00000361367 APOL5Q9BWW9 433 aa14.28□□□□□ -0.12
CTR9-201ENST00000361367 VCX3AQ9NNX9 186 aa14.28□□□□□ -0.12
CTR9-201ENST00000361367 MARCOQ9UEW3 520 aaPredicted RBP14.28□□□□□ -0.12
CTR9-201ENST00000361367 SLC13A4Q9UKG4 626 aa14.28□□□□□ -0.12
CTR9-201ENST00000361367 L3MBTL1Q9Y468 752 aa14.28□□□□□ -0.12
CTR9-201ENST00000361367 RNF103O00237 685 aa14.27□□□□□ -0.12
CTR9-201ENST00000361367 CYP2C18P33260 490 aa14.27□□□□□ -0.12
CTR9-201ENST00000361367 RPL7AP62424 266 aaKnown RBP14.27□□□□□ -0.12
CTR9-201ENST00000361367 CREMQ03060 361 aa14.27□□□□□ -0.12
CTR9-201ENST00000361367 TRADDQ15628 312 aa14.27□□□□□ -0.12
CTR9-201ENST00000361367 FAM83EQ2M2I3 478 aa14.27□□□□□ -0.12
CTR9-201ENST00000361367 ADCK2Q7Z695 626 aa14.27□□□□□ -0.12
CTR9-201ENST00000361367 DRG1Q9Y295 367 aaKnown RBP14.27□□□□□ -0.12
CTR9-201ENST00000361367 ATP5HO75947 161 aa14.27□□□□□ -0.12
CTR9-201ENST00000361367 IGFBP4P22692 258 aa14.27□□□□□ -0.12
CTR9-201ENST00000361367 SPIRE1Q08AE8 756 aa14.27□□□□□ -0.12
CTR9-201ENST00000361367 DDR2Q16832 855 aa14.27□□□□□ -0.12
CTR9-201ENST00000361367 LRRC38Q5VT99 294 aa14.27□□□□□ -0.12
CTR9-201ENST00000361367 ANKRD7Q92527 254 aa14.27□□□□□ -0.12
CTR9-201ENST00000361367 DUSP16Q9BY84 665 aa14.27□□□□□ -0.12
CTR9-201ENST00000361367 TRHDEQ9UKU6 1024 aa14.27□□□□□ -0.12
CTR9-201ENST00000361367 PDE4DIPQ5VU43 2346 aa14.27□□□□□ -0.12
CTR9-201ENST00000361367 HEATR9A2RTY3 570 aa14.27□□□□□ -0.13
CTR9-201ENST00000361367 SYNCRIPO60506 623 aaKnown RBP14.27□□□□□ -0.13
CTR9-201ENST00000361367 TRIM68Q6AZZ1 485 aa14.27□□□□□ -0.13
CTR9-201ENST00000361367 LVRNQ6Q4G3 990 aa14.27□□□□□ -0.13
CTR9-201ENST00000361367 SPATA21Q7Z572 469 aa14.27□□□□□ -0.13
CTR9-201ENST00000361367 KIRREL3Q8IZU9 778 aa14.27□□□□□ -0.13
CTR9-201ENST00000361367 SGF29Q96ES7 293 aa14.27□□□□□ -0.13
CTR9-201ENST00000361367 ASAH2Q9NR71 780 aa14.27□□□□□ -0.13
CTR9-201ENST00000361367 TRMT6Q9UJA5 497 aaKnown RBP14.27□□□□□ -0.13
CTR9-201ENST00000361367 FRMD3A2A2Y4 597 aa14.27□□□□□ -0.13
CTR9-201ENST00000361367 O00370 1275 aa14.27□□□□□ -0.13
CTR9-201ENST00000361367 TIMM44O43615 452 aa14.27□□□□□ -0.13
CTR9-201ENST00000361367 SRP72O76094 671 aaKnown RBP14.27□□□□□ -0.13
CTR9-201ENST00000361367 ITGALP20701 1170 aa14.27□□□□□ -0.13
CTR9-201ENST00000361367 GRB14Q14449 540 aa14.27□□□□□ -0.13
CTR9-201ENST00000361367 RASAL3Q86YV0 1011 aa14.27□□□□□ -0.13
CTR9-201ENST00000361367 PPP1R36Q96LQ0 422 aa14.27□□□□□ -0.13
CTR9-201ENST00000361367 XPO6Q96QU8 1125 aaKnown RBP14.27□□□□□ -0.13
CTR9-201ENST00000361367 CORO1BQ9BR76 489 aa14.27□□□□□ -0.13
CTR9-201ENST00000361367 HAUS8Q9BT25 410 aa14.27□□□□□ -0.13
CTR9-201ENST00000361367 SNRNP25Q9BV90 132 aaKnown RBP14.27□□□□□ -0.13
CTR9-201ENST00000361367 BCAS3Q9H6U6 928 aa14.27□□□□□ -0.13
CTR9-201ENST00000361367 CASS4Q9NQ75 786 aa14.27□□□□□ -0.13
CTR9-201ENST00000361367 CNGB3Q9NQW8 809 aa14.27□□□□□ -0.13
CTR9-201ENST00000361367 DNMT3LQ9UJW3 386 aa14.27□□□□□ -0.13
CTR9-201ENST00000361367 PBX1P40424 430 aa14.26□□□□□ -0.13
CTR9-201ENST00000361367 POU6F1Q14863 301 aa14.26□□□□□ -0.13
CTR9-201ENST00000361367 EFTUD2Q15029 972 aaKnown RBP eCLIP14.26□□□□□ -0.13
CTR9-201ENST00000361367 ZNF284Q2VY69 593 aa14.26□□□□□ -0.13
CTR9-201ENST00000361367 OTOP2Q7RTS6 562 aa14.26□□□□□ -0.13
CTR9-201ENST00000361367 DAW1Q8N136 415 aa14.26□□□□□ -0.13
CTR9-201ENST00000361367 APBB2Q92870 758 aa14.26□□□□□ -0.13
CTR9-201ENST00000361367 NCLNQ969V3 563 aa14.26□□□□□ -0.13
CTR9-201ENST00000361367 UBE2OQ9C0C9 1292 aaKnown RBP14.26□□□□□ -0.13
CTR9-201ENST00000361367 FZD8Q9H461 694 aa14.26□□□□□ -0.13
CTR9-201ENST00000361367 CHST7Q9NS84 486 aa14.26□□□□□ -0.13
CTR9-201ENST00000361367 ZWINTO95229 277 aa14.26□□□□□ -0.13
CTR9-201ENST00000361367 HDAC4P56524 1084 aa14.26□□□□□ -0.13
CTR9-201ENST00000361367 CDH17Q12864 832 aa14.26□□□□□ -0.13
CTR9-201ENST00000361367 SFSWAPQ12872 951 aaKnown RBP14.26□□□□□ -0.13
CTR9-201ENST00000361367 LPCAT1Q8NF37 534 aa14.26□□□□□ -0.13
CTR9-201ENST00000361367 EPS8L3Q8TE67 593 aaKnown RBP14.26□□□□□ -0.13
CTR9-201ENST00000361367 IARS2Q9NSE4 1012 aaKnown RBP14.26□□□□□ -0.13
CTR9-201ENST00000361367 SPG21Q9NZD8 308 aa14.26□□□□□ -0.13
CTR9-201ENST00000361367 ZNF212Q9UDV6 495 aa14.26□□□□□ -0.13
CTR9-201ENST00000361367 ZSCAN5CA6NGD5 496 aaPredicted RBP14.26□□□□□ -0.13
CTR9-201ENST00000361367 SCAMP3O14828 347 aaKnown RBP14.26□□□□□ -0.13
CTR9-201ENST00000361367 XPO1O14980 1071 aaKnown RBP14.26□□□□□ -0.13
CTR9-201ENST00000361367 ATP13A4Q4VNC1 1196 aa14.26□□□□□ -0.13
CTR9-201ENST00000361367 CREG2Q8IUH2 290 aa14.26□□□□□ -0.13
CTR9-201ENST00000361367 SERBP1Q8NC51 408 aaKnown RBP eCLIP14.26□□□□□ -0.13
CTR9-201ENST00000361367 DBF4BQ8NFT6 615 aa14.26□□□□□ -0.13
CTR9-201ENST00000361367 MORF4L1Q9UBU8 362 aa14.26□□□□□ -0.13
CTR9-201ENST00000361367 COL16A1Q07092 1604 aaPredicted RBP14.26□□□□□ -0.13
CTR9-201ENST00000361367 RCCD1A6NED2 376 aa14.25□□□□□ -0.13
CTR9-201ENST00000361367 HACD1B0YJ81 288 aa14.25□□□□□ -0.13
CTR9-201ENST00000361367 DNALI1O14645 258 aaPredicted RBP14.25□□□□□ -0.13
CTR9-201ENST00000361367 RBL1P28749 1068 aa14.25□□□□□ -0.13
CTR9-201ENST00000361367 MRPS5P82675 430 aaKnown RBP14.25□□□□□ -0.13
CTR9-201ENST00000361367 MTFR1Q15390 333 aa14.25□□□□□ -0.13
CTR9-201ENST00000361367 UGT3A1Q6NUS8 523 aa14.25□□□□□ -0.13
CTR9-201ENST00000361367 TPGS1Q6ZTW0 290 aa14.25□□□□□ -0.13
CTR9-201ENST00000361367 DHX30Q7L2E3 1194 aaKnown RBP eCLIP14.25□□□□□ -0.13
CTR9-201ENST00000361367 ARMC2Q8NEN0 867 aa14.25□□□□□ -0.13
CTR9-201ENST00000361367 SPPL2BQ8TCT7 592 aa14.25□□□□□ -0.13
CTR9-201ENST00000361367 KAT2BQ92831 832 aa14.25□□□□□ -0.13
CTR9-201ENST00000361367 PKD2L2Q9NZM6 624 aa14.25□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 31.7 ms