RNA–Protein interactions for RNA: ENST00000359429.10

RPE-202, Transcript of ribulose-5-phosphate-3-epimerase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RPE, Length 2,569 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPE-202ENST00000359429 DEFB107AQ8IZN7 70 aa11.24□□□□□ -0.61
RPE-202ENST00000359429 PCDH19Q8TAB3 1148 aa11.24□□□□□ -0.61
RPE-202ENST00000359429 GSDMBQ8TAX9 411 aa11.24□□□□□ -0.61
RPE-202ENST00000359429 RAB3IL1Q8TBN0 382 aa11.24□□□□□ -0.61
RPE-202ENST00000359429 TRAF3IP1Q8TDR0 691 aaPredicted RBP11.24□□□□□ -0.61
RPE-202ENST00000359429 TFB1MQ8WVM0 346 aaKnown RBP11.24□□□□□ -0.61
RPE-202ENST00000359429 PCYT2Q99447 389 aa11.24□□□□□ -0.61
RPE-202ENST00000359429 ACO2Q99798 780 aaKnown RBP11.24□□□□□ -0.61
RPE-202ENST00000359429 EBNA1BP2Q99848 306 aaKnown RBP11.24□□□□□ -0.61
RPE-202ENST00000359429 IL1RAPL1Q9NZN1 696 aa11.24□□□□□ -0.61
RPE-202ENST00000359429 COMMD3-BMI1R4GMX3 469 aa11.24□□□□□ -0.61
RPE-202ENST00000359429 C2CD4BA6NLJ0 364 aa11.24□□□□□ -0.61
RPE-202ENST00000359429 ZNF195O14628 629 aa11.24□□□□□ -0.61
RPE-202ENST00000359429 OGTO15294 1046 aa11.24□□□□□ -0.61
RPE-202ENST00000359429 SRGAP2CP0DJJ0 459 aa11.24□□□□□ -0.61
RPE-202ENST00000359429 ITGAXP20702 1163 aa11.24□□□□□ -0.61
RPE-202ENST00000359429 TTLL12Q14166 644 aaPredicted RBP11.24□□□□□ -0.61
RPE-202ENST00000359429 TFDP2Q14188 446 aa11.24□□□□□ -0.61
RPE-202ENST00000359429 PDK3Q15120 406 aa11.24□□□□□ -0.61
RPE-202ENST00000359429 MMEL1Q495T6 779 aa11.24□□□□□ -0.61
RPE-202ENST00000359429 UGT2A3Q6UWM9 527 aa11.24□□□□□ -0.61
RPE-202ENST00000359429 ZPBP2Q6X784 338 aa11.24□□□□□ -0.61
RPE-202ENST00000359429 REPS2Q8NFH8 660 aa11.24□□□□□ -0.61
RPE-202ENST00000359429 NMD3Q96D46 503 aaKnown RBP11.24□□□□□ -0.61
RPE-202ENST00000359429 KLC2Q9H0B6 622 aa11.24□□□□□ -0.61
RPE-202ENST00000359429 VCX3BQ9H321 246 aa11.24□□□□□ -0.61
RPE-202ENST00000359429 VCX3AQ9NNX9 186 aa11.24□□□□□ -0.61
RPE-202ENST00000359429 ASNSD1Q9NWL6 643 aa11.24□□□□□ -0.61
RPE-202ENST00000359429 PIH1D1Q9NWS0 290 aaKnown RBP11.24□□□□□ -0.61
RPE-202ENST00000359429 IRAK4Q9NWZ3 460 aa11.24□□□□□ -0.61
RPE-202ENST00000359429 SIX4Q9UIU6 781 aa11.24□□□□□ -0.61
RPE-202ENST00000359429 SORCS3Q9UPU3 1222 aa11.24□□□□□ -0.61
RPE-202ENST00000359429 APOBEC2Q9Y235 224 aaKnown RBP11.24□□□□□ -0.61
RPE-202ENST00000359429 E2F8A0AVK6 867 aa11.23□□□□□ -0.61
RPE-202ENST00000359429 M0QYV0 167 aa11.23□□□□□ -0.61
RPE-202ENST00000359429 WNT10BO00744 389 aa11.23□□□□□ -0.61
RPE-202ENST00000359429 TXNDC9O14530 226 aa11.23□□□□□ -0.61
RPE-202ENST00000359429 VAV1P15498 845 aa11.23□□□□□ -0.61
RPE-202ENST00000359429 PDGFRAP16234 1089 aa11.23□□□□□ -0.61
RPE-202ENST00000359429 GPD1P21695 349 aa11.23□□□□□ -0.61
RPE-202ENST00000359429 SERPINB6P35237 376 aa11.23□□□□□ -0.61
RPE-202ENST00000359429 MAGEA6P43360 314 aa11.23□□□□□ -0.61
RPE-202ENST00000359429 GABRB2P47870 512 aa11.23□□□□□ -0.61
RPE-202ENST00000359429 INHBCP55103 352 aa11.23□□□□□ -0.61
RPE-202ENST00000359429 BCAR1P56945 870 aa11.23□□□□□ -0.61
RPE-202ENST00000359429 CNTN2Q02246 1040 aa11.23□□□□□ -0.61
RPE-202ENST00000359429 PTPN11Q06124 597 aaPredicted RBP11.23□□□□□ -0.61
RPE-202ENST00000359429 GRM1Q13255 1194 aa11.23□□□□□ -0.61
RPE-202ENST00000359429 PDE1CQ14123 709 aaPredicted RBP11.23□□□□□ -0.61
RPE-202ENST00000359429 PCLAFQ15004 111 aa11.23□□□□□ -0.61
RPE-202ENST00000359429 PPM1JQ5JR12 505 aa11.23□□□□□ -0.61
RPE-202ENST00000359429 FKBP1CQ5VVH2 108 aa11.23□□□□□ -0.61
RPE-202ENST00000359429 SCYL2Q6P3W7 929 aa11.23□□□□□ -0.61
RPE-202ENST00000359429 SPATA24Q86W54 205 aa11.23□□□□□ -0.61
RPE-202ENST00000359429 NCAPG2Q86XI2 1143 aa11.23□□□□□ -0.61
RPE-202ENST00000359429 C10orf107Q8IVU9 208 aa11.23□□□□□ -0.61
RPE-202ENST00000359429 ACTRT2Q8TDY3 377 aa11.23□□□□□ -0.61
RPE-202ENST00000359429 DEPDC1BQ8WUY9 529 aa11.23□□□□□ -0.61
RPE-202ENST00000359429 OPTNQ96CV9 577 aa11.23□□□□□ -0.61
RPE-202ENST00000359429 OLFM3Q96PB7 478 aa11.23□□□□□ -0.61
RPE-202ENST00000359429 GCNAQ96QF7 691 aa11.23□□□□□ -0.61
RPE-202ENST00000359429 MOCS1Q9NZB8 636 aa11.23□□□□□ -0.61
RPE-202ENST00000359429 SF3B1O75533 1304 aaKnown RBP eCLIP11.23□□□□□ -0.61
RPE-202ENST00000359429 CAPN8A6NHC0 703 aa11.23□□□□□ -0.61
RPE-202ENST00000359429 TPP1O14773 563 aa11.23□□□□□ -0.61
RPE-202ENST00000359429 MED7O43513 233 aa11.23□□□□□ -0.61
RPE-202ENST00000359429 SMIM18P0DKX4 95 aa11.23□□□□□ -0.61
RPE-202ENST00000359429 CYP3A5P20815 502 aa11.23□□□□□ -0.61
RPE-202ENST00000359429 RANBP1P43487 201 aa11.23□□□□□ -0.61
RPE-202ENST00000359429 SLC10A2Q12908 348 aaPredicted RBP11.23□□□□□ -0.61
RPE-202ENST00000359429 KRT81Q14533 505 aa11.23□□□□□ -0.61
RPE-202ENST00000359429 TARBP2Q15633 366 aaKnown RBP11.23□□□□□ -0.61
RPE-202ENST00000359429 FAM47CQ5HY64 1035 aa11.23□□□□□ -0.61
RPE-202ENST00000359429 OXCT2Q9BYC2 517 aaPredicted RBP11.23□□□□□ -0.61
RPE-202ENST00000359429 MRPL4Q9BYD3 311 aaKnown RBP11.23□□□□□ -0.61
RPE-202ENST00000359429 NIFKQ9BYG3 293 aaKnown RBP11.23□□□□□ -0.61
RPE-202ENST00000359429 MAN1C1Q9NR34 630 aa11.23□□□□□ -0.61
RPE-202ENST00000359429 ZNF358Q9NW07 568 aa11.23□□□□□ -0.61
RPE-202ENST00000359429 BTBD7Q9P203 1132 aa11.23□□□□□ -0.61
RPE-202ENST00000359429 ITGA11Q9UKX5 1188 aa11.23□□□□□ -0.61
RPE-202ENST00000359429 ZNF214Q9UL59 606 aaPredicted RBP11.23□□□□□ -0.61
RPE-202ENST00000359429 PSAT1Q9Y617 370 aa11.23□□□□□ -0.61
RPE-202ENST00000359429 KIAA1217Q5T5P2 1943 aa11.23□□□□□ -0.61
RPE-202ENST00000359429 BCLAF3A2AJT9 711 aaKnown RBP11.23□□□□□ -0.61
RPE-202ENST00000359429 ZBTB14O43829 449 aa11.23□□□□□ -0.61
RPE-202ENST00000359429 PRPSAP2O60256 369 aa11.23□□□□□ -0.61
RPE-202ENST00000359429 PLIN3O60664 434 aa11.23□□□□□ -0.61
RPE-202ENST00000359429 KLHL2O95198 593 aa11.23□□□□□ -0.61
RPE-202ENST00000359429 ATP5BP06576 529 aaKnown RBP11.23□□□□□ -0.61
RPE-202ENST00000359429 GBE1Q04446 702 aa11.23□□□□□ -0.61
RPE-202ENST00000359429 FOLH1Q04609 750 aa11.23□□□□□ -0.61
RPE-202ENST00000359429 PRKG1Q13976 671 aa11.23□□□□□ -0.61
RPE-202ENST00000359429 TMEM132BQ14DG7 1078 aa11.23□□□□□ -0.61
RPE-202ENST00000359429 ACAP1Q15027 740 aa11.23□□□□□ -0.61
RPE-202ENST00000359429 TLR1Q15399 786 aa11.23□□□□□ -0.61
RPE-202ENST00000359429 PDPK2PQ6A1A2 396 aa11.23□□□□□ -0.61
RPE-202ENST00000359429 TIFABQ6ZNK6 161 aa11.23□□□□□ -0.61
RPE-202ENST00000359429 FAM183BPQ6ZVS7 135 aa11.23□□□□□ -0.61
RPE-202ENST00000359429 KBTBD6Q86V97 674 aa11.23□□□□□ -0.61
RPE-202ENST00000359429 MCUQ8NE86 351 aa11.23□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 18.3 ms