RNA–Protein interactions for RNA: ENST00000359060.5

SSU72-202, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2 BASIC

Gene SSU72, Length 4,176 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-202ENST00000359060 CCND1P24385 295 aa11.54□□□□□ -0.56
SSU72-202ENST00000359060 FDFT1P37268 417 aa11.54□□□□□ -0.56
SSU72-202ENST00000359060 TAF12Q16514 161 aa11.54□□□□□ -0.56
SSU72-202ENST00000359060 C4orf22Q6V702 233 aa11.54□□□□□ -0.56
SSU72-202ENST00000359060 AGAP11Q8TF27 550 aa11.54□□□□□ -0.56
SSU72-202ENST00000359060 NSL1Q96IY1 281 aa11.54□□□□□ -0.56
SSU72-202ENST00000359060 MAML3Q96JK9 1138 aa11.54□□□□□ -0.56
SSU72-202ENST00000359060 ZNF670Q9BS34 389 aa11.54□□□□□ -0.56
SSU72-202ENST00000359060 FSD1LQ9BXM9 530 aa11.54□□□□□ -0.56
SSU72-202ENST00000359060 GREB1LQ9C091 1923 aaPredicted RBP11.54□□□□□ -0.56
SSU72-202ENST00000359060 TXNDC9O14530 226 aa11.54□□□□□ -0.56
SSU72-202ENST00000359060 CNMDO75829 334 aa11.54□□□□□ -0.56
SSU72-202ENST00000359060 UNC5CO95185 931 aa11.54□□□□□ -0.56
SSU72-202ENST00000359060 POMCP01189 267 aa11.54□□□□□ -0.56
SSU72-202ENST00000359060 JCHAINP01591 159 aa11.54□□□□□ -0.56
SSU72-202ENST00000359060 SLC4A1P02730 911 aa11.54□□□□□ -0.56
SSU72-202ENST00000359060 PDHA1P08559 390 aa11.54□□□□□ -0.56
SSU72-202ENST00000359060 USP17L7P0C7H9 530 aa11.54□□□□□ -0.56
SSU72-202ENST00000359060 TPH1P17752 444 aa11.54□□□□□ -0.56
SSU72-202ENST00000359060 PTPN1P18031 435 aaKnown RBP11.54□□□□□ -0.56
SSU72-202ENST00000359060 CDH5P33151 784 aaPredicted RBP11.54□□□□□ -0.56
SSU72-202ENST00000359060 SERPINB6P35237 376 aa11.54□□□□□ -0.56
SSU72-202ENST00000359060 ASPHQ12797 758 aa11.54□□□□□ -0.56
SSU72-202ENST00000359060 ANKRD20A2Q5SQ80 823 aa11.54□□□□□ -0.56
SSU72-202ENST00000359060 ANKRD20A1Q5TYW2 823 aa11.54□□□□□ -0.56
SSU72-202ENST00000359060 RNF43Q68DV7 783 aa11.54□□□□□ -0.56
SSU72-202ENST00000359060 ITPRIPL1Q6GPH6 555 aa11.54□□□□□ -0.56
SSU72-202ENST00000359060 LRRC52Q8N7C0 313 aa11.54□□□□□ -0.56
SSU72-202ENST00000359060 CCNYL1Q8N7R7 359 aa11.54□□□□□ -0.56
SSU72-202ENST00000359060 ZC3H15Q8WU90 426 aaKnown RBP11.54□□□□□ -0.56
SSU72-202ENST00000359060 USP6NLQ92738 828 aa11.54□□□□□ -0.56
SSU72-202ENST00000359060 SENP8Q96LD8 212 aa11.54□□□□□ -0.56
SSU72-202ENST00000359060 TTC1Q99614 292 aa11.54□□□□□ -0.56
SSU72-202ENST00000359060 PRDM12Q9H4Q4 367 aa11.54□□□□□ -0.56
SSU72-202ENST00000359060 PTPRHQ9HD43 1115 aa11.54□□□□□ -0.56
SSU72-202ENST00000359060 C20orf96Q9NUD7 363 aaPredicted RBP11.54□□□□□ -0.56
SSU72-202ENST00000359060 SLC38A7Q9NVC3 462 aa11.54□□□□□ -0.56
SSU72-202ENST00000359060 KCNH4Q9UQ05 1017 aa11.54□□□□□ -0.56
SSU72-202ENST00000359060 CLUHO75153 1309 aa11.54□□□□□ -0.56
SSU72-202ENST00000359060 PSMB4P28070 264 aa11.54□□□□□ -0.56
SSU72-202ENST00000359060 PCSK1P29120 753 aa11.54□□□□□ -0.56
SSU72-202ENST00000359060 CA8P35219 290 aa11.54□□□□□ -0.56
SSU72-202ENST00000359060 GRIK1P39086 918 aa11.54□□□□□ -0.56
SSU72-202ENST00000359060 AQP5P55064 265 aa11.54□□□□□ -0.56
SSU72-202ENST00000359060 THEM5Q8N1Q8 247 aa11.54□□□□□ -0.56
SSU72-202ENST00000359060 LPPQ93052 612 aa11.54□□□□□ -0.56
SSU72-202ENST00000359060 CDHR5Q9HBB8 845 aa11.54□□□□□ -0.56
SSU72-202ENST00000359060 FNDC3AQ9Y2H6 1198 aaKnown RBP11.54□□□□□ -0.56
SSU72-202ENST00000359060 C2orf71A6NGG8 1288 aa11.53□□□□□ -0.56
SSU72-202ENST00000359060 ZBTB42B2RXF5 422 aa11.53□□□□□ -0.56
SSU72-202ENST00000359060 PRPF4O43172 522 aaKnown RBP eCLIP11.53□□□□□ -0.56
SSU72-202ENST00000359060 MYCP01106 439 aaPredicted RBP11.53□□□□□ -0.56
SSU72-202ENST00000359060 KCNA4P22459 653 aa11.53□□□□□ -0.56
SSU72-202ENST00000359060 CCDC185Q8N715 623 aa11.53□□□□□ -0.56
SSU72-202ENST00000359060 IPMKQ8NFU5 416 aa11.53□□□□□ -0.56
SSU72-202ENST00000359060 CSPG4P5Q96PW8 444 aa11.53□□□□□ -0.56
SSU72-202ENST00000359060 THTPAQ9BU02 230 aa11.53□□□□□ -0.56
SSU72-202ENST00000359060 RNF39Q9H2S5 420 aa11.53□□□□□ -0.56
SSU72-202ENST00000359060 CCDC134Q9H6E4 229 aa11.53□□□□□ -0.56
SSU72-202ENST00000359060 FBXO6Q9NRD1 293 aaPredicted RBP11.53□□□□□ -0.56
SSU72-202ENST00000359060 LTBP1Q14766 1721 aa11.53□□□□□ -0.56
SSU72-202ENST00000359060 LOC100653049A0A140TA62 436 aa11.53□□□□□ -0.56
SSU72-202ENST00000359060 DCAF8L1A6NGE4 600 aa11.53□□□□□ -0.56
SSU72-202ENST00000359060 GOLGA8TH3BQL2 631 aa11.53□□□□□ -0.56
SSU72-202ENST00000359060 KRT34O76011 436 aa11.53□□□□□ -0.56
SSU72-202ENST00000359060 THPOP40225 353 aa11.53□□□□□ -0.56
SSU72-202ENST00000359060 SNX17Q15036 470 aa11.53□□□□□ -0.56
SSU72-202ENST00000359060 SOWAHAQ2M3V2 549 aa11.53□□□□□ -0.56
SSU72-202ENST00000359060 C1orf146Q5VVC0 180 aa11.53□□□□□ -0.56
SSU72-202ENST00000359060 ADGRD1Q6QNK2 874 aa11.53□□□□□ -0.56
SSU72-202ENST00000359060 PRPF39Q86UA1 669 aaKnown RBP11.53□□□□□ -0.56
SSU72-202ENST00000359060 RNF135Q8IUD6 432 aa11.53□□□□□ -0.56
SSU72-202ENST00000359060 ABI1Q8IZP0 508 aa11.53□□□□□ -0.56
SSU72-202ENST00000359060 DCLK2Q8N568 766 aa11.53□□□□□ -0.56
SSU72-202ENST00000359060 ZMAT2Q96NC0 199 aaKnown RBP11.53□□□□□ -0.56
SSU72-202ENST00000359060 TRIM56Q9BRZ2 755 aaKnown RBP11.53□□□□□ -0.56
SSU72-202ENST00000359060 SYT17Q9BSW7 474 aa11.53□□□□□ -0.56
SSU72-202ENST00000359060 IL1RAPL1Q9NZN1 696 aa11.53□□□□□ -0.56
SSU72-202ENST00000359060 EVPLQ92817 2033 aa11.53□□□□□ -0.56
SSU72-202ENST00000359060 FAM237BA0A1B0GVD1 139 aa11.53□□□□□ -0.56
SSU72-202ENST00000359060 RASSF9O75901 435 aa11.53□□□□□ -0.56
SSU72-202ENST00000359060 CXCL17Q6UXB2 119 aa11.53□□□□□ -0.56
SSU72-202ENST00000359060 TDRPQ86YL5 185 aa11.53□□□□□ -0.56
SSU72-202ENST00000359060 RFWD2Q8NHY2 731 aa11.53□□□□□ -0.56
SSU72-202ENST00000359060 L3MBTL3Q96JM7 780 aaPredicted RBP11.53□□□□□ -0.56
SSU72-202ENST00000359060 HSFY1Q96LI6 401 aa11.53□□□□□ -0.56
SSU72-202ENST00000359060 TSPYL2Q9H2G4 693 aaPredicted RBP11.53□□□□□ -0.56
SSU72-202ENST00000359060 CPSF2Q9P2I0 782 aaKnown RBP11.53□□□□□ -0.56
SSU72-202ENST00000359060 NUDT5Q9UKK9 219 aa11.53□□□□□ -0.56
SSU72-202ENST00000359060 CFLARO15519 480 aa11.53□□□□□ -0.56
SSU72-202ENST00000359060 STAMBPO95630 424 aa11.53□□□□□ -0.56
SSU72-202ENST00000359060 ERVK-10P10266 1014 aa11.53□□□□□ -0.56
SSU72-202ENST00000359060 NPR3P17342 541 aa11.53□□□□□ -0.56
SSU72-202ENST00000359060 NR2C2P49116 596 aa11.53□□□□□ -0.56
SSU72-202ENST00000359060 POU5F1BQ06416 359 aa11.53□□□□□ -0.56
SSU72-202ENST00000359060 BNIP1Q12981 228 aa11.53□□□□□ -0.56
SSU72-202ENST00000359060 RASA2Q15283 850 aa11.53□□□□□ -0.56
SSU72-202ENST00000359060 ARFGAP1Q8N6T3 406 aa11.53□□□□□ -0.56
SSU72-202ENST00000359060 SLC44A1Q8WWI5 657 aa11.53□□□□□ -0.56
SSU72-202ENST00000359060 SLC39A10Q9ULF5 831 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms