RNA–Protein interactions for RNA: ENST00000358511.10

COL6A6-201, Transcript of collagen type VI alpha 6 chain, humanhuman

APPRIS P1 TSL 5 BASIC

Gene COL6A6, Length 9,581 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A6-201ENST00000358511 CAPZA2P47755 286 aa9□□□□□ -0.97
COL6A6-201ENST00000358511 DGKKQ5KSL6 1271 aa9□□□□□ -0.97
COL6A6-201ENST00000358511 UGT3A1Q6NUS8 523 aa9□□□□□ -0.97
COL6A6-201ENST00000358511 EFHBQ8N7U6 833 aa9□□□□□ -0.97
COL6A6-201ENST00000358511 PIWIL2Q8TC59 973 aaKnown RBP9□□□□□ -0.97
COL6A6-201ENST00000358511 L3MBTL3Q96JM7 780 aaPredicted RBP9□□□□□ -0.97
COL6A6-201ENST00000358511 GPAMQ9HCL2 828 aa9□□□□□ -0.97
COL6A6-201ENST00000358511 NUDT5Q9UKK9 219 aa9□□□□□ -0.97
COL6A6-201ENST00000358511 WBP11Q9Y2W2 641 aaKnown RBP9□□□□□ -0.97
COL6A6-201ENST00000358511 RAD54BQ9Y620 910 aa9□□□□□ -0.97
COL6A6-201ENST00000358511 ACADSBP45954 432 aa8.99□□□□□ -0.97
COL6A6-201ENST00000358511 GLRBP48167 497 aa8.99□□□□□ -0.97
COL6A6-201ENST00000358511 TOP3AQ13472 1001 aaPredicted RBP8.99□□□□□ -0.97
COL6A6-201ENST00000358511 NEK10Q6ZWH5 1172 aa8.99□□□□□ -0.97
COL6A6-201ENST00000358511 SLC47A2Q86VL8 602 aa8.99□□□□□ -0.97
COL6A6-201ENST00000358511 KBTBD2Q8IY47 623 aa8.99□□□□□ -0.97
COL6A6-201ENST00000358511 IPMKQ8NFU5 416 aa8.99□□□□□ -0.97
COL6A6-201ENST00000358511 SUN5Q8TC36 379 aa8.99□□□□□ -0.97
COL6A6-201ENST00000358511 SLC25A23Q9BV35 468 aa8.99□□□□□ -0.97
COL6A6-201ENST00000358511 SPAG4Q9NPE6 437 aa8.99□□□□□ -0.97
COL6A6-201ENST00000358511 ING3Q9NXR8 418 aa8.99□□□□□ -0.97
COL6A6-201ENST00000358511 ANXA9O76027 345 aa8.99□□□□□ -0.97
COL6A6-201ENST00000358511 RPL10AP62906 217 aaKnown RBP8.99□□□□□ -0.97
COL6A6-201ENST00000358511 TMEM132DQ14C87 1099 aa8.99□□□□□ -0.97
COL6A6-201ENST00000358511 ANKS3Q6ZW76 656 aa8.99□□□□□ -0.97
COL6A6-201ENST00000358511 MIER2Q8N344 545 aa8.99□□□□□ -0.97
COL6A6-201ENST00000358511 AFG1LQ8WV93 481 aa8.99□□□□□ -0.97
COL6A6-201ENST00000358511 FOPNLQ96NB1 174 aa8.99□□□□□ -0.97
COL6A6-201ENST00000358511 RERGLQ9H628 205 aa8.99□□□□□ -0.97
COL6A6-201ENST00000358511 TMCC3Q9ULS5 477 aa8.99□□□□□ -0.97
COL6A6-201ENST00000358511 HS6ST1O60243 411 aa8.99□□□□□ -0.97
COL6A6-201ENST00000358511 VPS4BO75351 444 aa8.99□□□□□ -0.97
COL6A6-201ENST00000358511 ACOT2P49753 483 aa8.99□□□□□ -0.97
COL6A6-201ENST00000358511 NFIL3Q16649 462 aa8.99□□□□□ -0.97
COL6A6-201ENST00000358511 AAGABQ6PD74 315 aa8.99□□□□□ -0.97
COL6A6-201ENST00000358511 CYP2R1Q6VVX0 501 aa8.99□□□□□ -0.97
COL6A6-201ENST00000358511 SNX31Q8N9S9 440 aa8.99□□□□□ -0.97
COL6A6-201ENST00000358511 KBTBD8Q8NFY9 601 aa8.99□□□□□ -0.97
COL6A6-201ENST00000358511 ASIC4Q96FT7 647 aa8.99□□□□□ -0.97
COL6A6-201ENST00000358511 CRNNQ9UBG3 495 aaPredicted RBP8.99□□□□□ -0.97
COL6A6-201ENST00000358511 TNS3Q68CZ2 1445 aa8.99□□□□□ -0.97
COL6A6-201ENST00000358511 ATG7O95352 703 aa8.99□□□□□ -0.97
COL6A6-201ENST00000358511 HLA-DRAP01903 254 aa8.99□□□□□ -0.97
COL6A6-201ENST00000358511 NAB1Q13506 487 aa8.99□□□□□ -0.97
COL6A6-201ENST00000358511 DGCR6Q14129 220 aa8.99□□□□□ -0.97
COL6A6-201ENST00000358511 RNF219Q5W0B1 726 aaPredicted RBP8.99□□□□□ -0.97
COL6A6-201ENST00000358511 ARCQ7LC44 396 aa8.99□□□□□ -0.97
COL6A6-201ENST00000358511 NSUN6Q8TEA1 469 aaKnown RBP8.99□□□□□ -0.97
COL6A6-201ENST00000358511 RNFT2Q96EX2 444 aa8.99□□□□□ -0.97
COL6A6-201ENST00000358511 RNF145Q96MT1 663 aa8.99□□□□□ -0.97
COL6A6-201ENST00000358511 PPP1R10Q96QC0 940 aaKnown RBP8.99□□□□□ -0.97
COL6A6-201ENST00000358511 CPNE1Q99829 537 aa8.99□□□□□ -0.97
COL6A6-201ENST00000358511 LRRC40Q9H9A6 602 aa8.99□□□□□ -0.97
COL6A6-201ENST00000358511 H7C0S8 307 aa8.99□□□□□ -0.97
COL6A6-201ENST00000358511 DRG2P55039 364 aaKnown RBP8.99□□□□□ -0.97
COL6A6-201ENST00000358511 ZNF57Q68EA5 555 aaPredicted RBP8.99□□□□□ -0.97
COL6A6-201ENST00000358511 SNX32Q86XE0 403 aa8.99□□□□□ -0.97
COL6A6-201ENST00000358511 NEDD1Q8NHV4 660 aa8.99□□□□□ -0.97
COL6A6-201ENST00000358511 VANGL2Q9ULK5 521 aa8.99□□□□□ -0.97
COL6A6-201ENST00000358511 AKAP12Q02952 1782 aa8.99□□□□□ -0.97
COL6A6-201ENST00000358511 NME5P56597 212 aa8.99□□□□□ -0.97
COL6A6-201ENST00000358511 GSCP56915 257 aaPredicted RBP8.99□□□□□ -0.97
COL6A6-201ENST00000358511 NAA20P61599 178 aa8.99□□□□□ -0.97
COL6A6-201ENST00000358511 NT5C1AQ9BXI3 368 aa8.99□□□□□ -0.97
COL6A6-201ENST00000358511 PCDHA3Q9Y5H8 950 aa8.99□□□□□ -0.97
COL6A6-201ENST00000358511 AP4B1Q9Y6B7 739 aa8.99□□□□□ -0.97
COL6A6-201ENST00000358511 NPM3O75607 178 aaKnown RBP8.99□□□□□ -0.97
COL6A6-201ENST00000358511 ADSSP30520 456 aa8.99□□□□□ -0.97
COL6A6-201ENST00000358511 SCARF1Q14162 830 aa8.99□□□□□ -0.97
COL6A6-201ENST00000358511 ZFP69Q49AA0 526 aa8.99□□□□□ -0.97
COL6A6-201ENST00000358511 RNF19BQ6ZMZ0 732 aa8.99□□□□□ -0.97
COL6A6-201ENST00000358511 ADHFE1Q8IWW8 467 aa8.99□□□□□ -0.97
COL6A6-201ENST00000358511 SFRP1Q8N474 314 aa8.99□□□□□ -0.97
COL6A6-201ENST00000358511 KIF12Q96FN5 646 aa8.99□□□□□ -0.97
COL6A6-201ENST00000358511 NINJ2Q9NZG7 142 aa8.99□□□□□ -0.97
COL6A6-201ENST00000358511 TJP2Q9UDY2 1190 aa8.99□□□□□ -0.97
COL6A6-201ENST00000358511 POLG2Q9UHN1 485 aa8.99□□□□□ -0.97
COL6A6-201ENST00000358511 MAPRE3Q9UPY8 281 aa8.99□□□□□ -0.97
COL6A6-201ENST00000358511 KDM6AO15550 1401 aaPredicted RBP8.99□□□□□ -0.97
COL6A6-201ENST00000358511 AUHQ13825 339 aaKnown RBP8.99□□□□□ -0.97
COL6A6-201ENST00000358511 PHACTR1Q9C0D0 580 aa8.99□□□□□ -0.97
COL6A6-201ENST00000358511 NEUROD4Q9HD90 331 aa8.99□□□□□ -0.97
COL6A6-201ENST00000358511 FBXO40Q9UH90 709 aa8.99□□□□□ -0.97
COL6A6-201ENST00000358511 ATP6V1HQ9UI12 483 aa8.99□□□□□ -0.97
COL6A6-201ENST00000358511 ING4Q9UNL4 249 aa8.99□□□□□ -0.97
COL6A6-201ENST00000358511 NDUFAF1Q9Y375 327 aa8.99□□□□□ -0.97
COL6A6-201ENST00000358511 TAF6LQ9Y6J9 622 aa8.99□□□□□ -0.97
COL6A6-201ENST00000358511 CCDC154A6NI56 674 aa8.98□□□□□ -0.97
COL6A6-201ENST00000358511 MGRN1O60291 552 aa8.98□□□□□ -0.97
COL6A6-201ENST00000358511 RARBP10826 455 aa8.98□□□□□ -0.97
COL6A6-201ENST00000358511 SNRNP48Q6IEG0 339 aaKnown RBP8.98□□□□□ -0.97
COL6A6-201ENST00000358511 POC5Q8NA72 575 aa8.98□□□□□ -0.97
COL6A6-201ENST00000358511 GRPEL2Q8TAA5 225 aa8.98□□□□□ -0.97
COL6A6-201ENST00000358511 CATSPERBQ9H7T0 1116 aa8.98□□□□□ -0.97
COL6A6-201ENST00000358511 MYL12AP19105 171 aa8.98□□□□□ -0.97
COL6A6-201ENST00000358511 POLR2EP19388 210 aaKnown RBP8.98□□□□□ -0.97
COL6A6-201ENST00000358511 ST3GAL1Q11201 340 aa8.98□□□□□ -0.97
COL6A6-201ENST00000358511 LIN52Q52LA3 116 aa8.98□□□□□ -0.97
COL6A6-201ENST00000358511 SWSAP1Q6NVH7 229 aa8.98□□□□□ -0.97
COL6A6-201ENST00000358511 STK32CQ86UX6 486 aa8.98□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 30.2 ms