RNA–Protein interactions for RNA: ENST00000358181.8

CHD3-202, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CHD3, Length 7,286 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-202ENST00000358181 C4orf33Q8N1A6 199 aa10.02□□□□□ -0.81
CHD3-202ENST00000358181 TP53INP1Q96A56 240 aa10.02□□□□□ -0.81
CHD3-202ENST00000358181 CXorf40BQ96DE9 158 aa10.02□□□□□ -0.81
CHD3-202ENST00000358181 OLFM3Q96PB7 478 aa10.02□□□□□ -0.81
CHD3-202ENST00000358181 VPS35Q96QK1 796 aa10.02□□□□□ -0.81
CHD3-202ENST00000358181 ELOVL2Q9NXB9 296 aa10.02□□□□□ -0.81
CHD3-202ENST00000358181 ENTPD4Q9Y227 616 aa10.02□□□□□ -0.81
CHD3-202ENST00000358181 HECW2Q9P2P5 1572 aa10.02□□□□□ -0.81
CHD3-202ENST00000358181 LOC100653049A0A140TA62 436 aa10.01□□□□□ -0.81
CHD3-202ENST00000358181 KRT34O76011 436 aa10.01□□□□□ -0.81
CHD3-202ENST00000358181 SFNP31947 248 aa10.01□□□□□ -0.81
CHD3-202ENST00000358181 ZNHIT3Q15649 155 aaPredicted RBP10.01□□□□□ -0.81
CHD3-202ENST00000358181 HSDL1Q3SXM5 330 aa10.01□□□□□ -0.81
CHD3-202ENST00000358181 SEZ6Q53EL9 994 aa10.01□□□□□ -0.81
CHD3-202ENST00000358181 FAXCQ5TGI0 409 aa10.01□□□□□ -0.81
CHD3-202ENST00000358181 STRIP1Q5VSL9 837 aa10.01□□□□□ -0.81
CHD3-202ENST00000358181 EFCAB3Q8N7B9 438 aa10.01□□□□□ -0.81
CHD3-202ENST00000358181 SGCDQ92629 289 aa10.01□□□□□ -0.81
CHD3-202ENST00000358181 MTMR8Q96EF0 704 aa10.01□□□□□ -0.81
CHD3-202ENST00000358181 ATG10Q9H0Y0 220 aa10.01□□□□□ -0.81
CHD3-202ENST00000358181 GGA2Q9UJY4 613 aa10.01□□□□□ -0.81
CHD3-202ENST00000358181 GPC6Q9Y625 555 aaPredicted RBP10.01□□□□□ -0.81
CHD3-202ENST00000358181 KCNH1O95259 989 aa10.01□□□□□ -0.81
CHD3-202ENST00000358181 IFNA14P01570 189 aa10.01□□□□□ -0.81
CHD3-202ENST00000358181 VTNP04004 478 aa10.01□□□□□ -0.81
CHD3-202ENST00000358181 DNTTP04053 509 aa10.01□□□□□ -0.81
CHD3-202ENST00000358181 ELK3P41970 407 aa10.01□□□□□ -0.81
CHD3-202ENST00000358181 HSPA13P48723 471 aa10.01□□□□□ -0.81
CHD3-202ENST00000358181 IL5RAQ01344 420 aa10.01□□□□□ -0.81
CHD3-202ENST00000358181 EML3Q32P44 896 aa10.01□□□□□ -0.81
CHD3-202ENST00000358181 CATSPER1Q8NEC5 780 aa10.01□□□□□ -0.81
CHD3-202ENST00000358181 ADCY4Q8NFM4 1077 aa10.01□□□□□ -0.81
CHD3-202ENST00000358181 SEMA4DQ92854 862 aa10.01□□□□□ -0.81
CHD3-202ENST00000358181 FERD3LQ96RJ6 166 aa10.01□□□□□ -0.81
CHD3-202ENST00000358181 TMEM120AQ9BXJ8 343 aa10.01□□□□□ -0.81
CHD3-202ENST00000358181 TMEM39BQ9GZU3 492 aa10.01□□□□□ -0.81
CHD3-202ENST00000358181 TMEM117Q9H0C3 514 aa10.01□□□□□ -0.81
CHD3-202ENST00000358181 GPRC5DQ9NZD1 345 aa10.01□□□□□ -0.81
CHD3-202ENST00000358181 PDE9AO76083 593 aa10.01□□□□□ -0.81
CHD3-202ENST00000358181 EPHB2P29323 1055 aa10.01□□□□□ -0.81
CHD3-202ENST00000358181 MTA1Q13330 715 aa10.01□□□□□ -0.81
CHD3-202ENST00000358181 C1DQ13901 141 aaKnown RBP10.01□□□□□ -0.81
CHD3-202ENST00000358181 TCEAL6Q6IPX3 200 aa10.01□□□□□ -0.81
CHD3-202ENST00000358181 PTAR1Q7Z6K3 402 aaPredicted RBP10.01□□□□□ -0.81
CHD3-202ENST00000358181 TDRPQ86YL5 185 aa10.01□□□□□ -0.81
CHD3-202ENST00000358181 APLFQ8IW19 511 aaPredicted RBP10.01□□□□□ -0.81
CHD3-202ENST00000358181 DSN1Q9H410 356 aa10.01□□□□□ -0.81
CHD3-202ENST00000358181 ERI2A8K979 691 aaKnown RBP10.01□□□□□ -0.81
CHD3-202ENST00000358181 TSPAN19P0C672 248 aa10.01□□□□□ -0.81
CHD3-202ENST00000358181 NMT1P30419 496 aaKnown RBP10.01□□□□□ -0.81
CHD3-202ENST00000358181 LONRF1Q17RB8 773 aa10.01□□□□□ -0.81
CHD3-202ENST00000358181 AASDHQ4L235 1098 aaPredicted RBP10.01□□□□□ -0.81
CHD3-202ENST00000358181 PPP1R26Q5T8A7 1209 aaPredicted RBP10.01□□□□□ -0.81
CHD3-202ENST00000358181 ITIH5Q86UX2 942 aa10.01□□□□□ -0.81
CHD3-202ENST00000358181 ELMO1Q92556 727 aa10.01□□□□□ -0.81
CHD3-202ENST00000358181 RAD54LQ92698 747 aa10.01□□□□□ -0.81
CHD3-202ENST00000358181 CALR3Q96L12 384 aaKnown RBP10.01□□□□□ -0.81
CHD3-202ENST00000358181 GTPBP2Q9BX10 602 aaKnown RBP10.01□□□□□ -0.81
CHD3-202ENST00000358181 NT5MQ9NPB1 228 aa10.01□□□□□ -0.81
CHD3-202ENST00000358181 MCUBQ9NWR8 336 aa10.01□□□□□ -0.81
CHD3-202ENST00000358181 MRPS7Q9Y2R9 242 aaKnown RBP10.01□□□□□ -0.81
CHD3-202ENST00000358181 B3GAT3O94766 335 aa10.01□□□□□ -0.81
CHD3-202ENST00000358181 NDUFA10O95299 355 aa10.01□□□□□ -0.81
CHD3-202ENST00000358181 MAPK1P28482 360 aa10.01□□□□□ -0.81
CHD3-202ENST00000358181 RAD23AP54725 363 aa10.01□□□□□ -0.81
CHD3-202ENST00000358181 PFKFB3Q16875 520 aaPredicted RBP10.01□□□□□ -0.81
CHD3-202ENST00000358181 CHRDL2Q6WN34 429 aa10.01□□□□□ -0.81
CHD3-202ENST00000358181 ATG9AQ7Z3C6 839 aa10.01□□□□□ -0.81
CHD3-202ENST00000358181 RACGAP1Q9H0H5 632 aa10.01□□□□□ -0.81
CHD3-202ENST00000358181 CNTNAP2Q9UHC6 1331 aa10.01□□□□□ -0.81
CHD3-202ENST00000358181 A0A1W2PRG6 482 aa10.01□□□□□ -0.81
CHD3-202ENST00000358181 ESYT3A0FGR9 886 aa10.01□□□□□ -0.81
CHD3-202ENST00000358181 TCP11X1B4DZS4 312 aa10.01□□□□□ -0.81
CHD3-202ENST00000358181 H3BRB1 525 aa10.01□□□□□ -0.81
CHD3-202ENST00000358181 TMCC2O75069 709 aa10.01□□□□□ -0.81
CHD3-202ENST00000358181 POLR2EP19388 210 aaKnown RBP10.01□□□□□ -0.81
CHD3-202ENST00000358181 PCSK1P29120 753 aa10.01□□□□□ -0.81
CHD3-202ENST00000358181 NOS2P35228 1153 aa10.01□□□□□ -0.81
CHD3-202ENST00000358181 MAPK10P53779 464 aa10.01□□□□□ -0.81
CHD3-202ENST00000358181 CAV3P56539 151 aa10.01□□□□□ -0.81
CHD3-202ENST00000358181 NFYCQ13952 458 aa10.01□□□□□ -0.81
CHD3-202ENST00000358181 MAPK11Q15759 364 aa10.01□□□□□ -0.81
CHD3-202ENST00000358181 ATF7IP2Q5U623 682 aa10.01□□□□□ -0.81
CHD3-202ENST00000358181 NAXEQ8NCW5 288 aa10.01□□□□□ -0.81
CHD3-202ENST00000358181 TOP3BO95985 862 aaKnown RBP10□□□□□ -0.81
CHD3-202ENST00000358181 ITGB3P05106 788 aa10□□□□□ -0.81
CHD3-202ENST00000358181 PABPC1P11940 636 aaKnown RBP10□□□□□ -0.81
CHD3-202ENST00000358181 ERCC2P18074 760 aa10□□□□□ -0.81
CHD3-202ENST00000358181 RAP1GAPP47736 663 aa10□□□□□ -0.81
CHD3-202ENST00000358181 OMPP47874 163 aa10□□□□□ -0.81
CHD3-202ENST00000358181 WLSQ5T9L3 541 aa10□□□□□ -0.81
CHD3-202ENST00000358181 ZNF655Q8N720 491 aaPredicted RBP10□□□□□ -0.81
CHD3-202ENST00000358181 PPP1R13LQ8WUF5 828 aa10□□□□□ -0.81
CHD3-202ENST00000358181 RAD51AP1Q96B01 352 aa10□□□□□ -0.81
CHD3-202ENST00000358181 ZNF222Q9UK12 451 aa10□□□□□ -0.81
CHD3-202ENST00000358181 A0A075B6Q4 140 aa10□□□□□ -0.81
CHD3-202ENST00000358181 GSG1L2A8MUP6 293 aa10□□□□□ -0.81
CHD3-202ENST00000358181 PHF20L1A8MW92 1017 aa10□□□□□ -0.81
CHD3-202ENST00000358181 LIN7AO14910 233 aaPredicted RBP10□□□□□ -0.81
CHD3-202ENST00000358181 GPR182O15218 404 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 20.7 ms