RNA–Protein interactions for RNA: ENST00000357980.8

TPM1-205, Transcript of tropomyosin 1, humanhuman

TSL 2 BASIC

Gene TPM1, Length 1,800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-205ENST00000357980 IFT20Q8IY31 132 aa17.7■□□□□ 0.42
TPM1-205ENST00000357980 PLD5Q8N7P1 536 aa17.7■□□□□ 0.42
TPM1-205ENST00000357980 TTC13Q8NBP0 860 aa17.7■□□□□ 0.42
TPM1-205ENST00000357980 ACTL9Q8TC94 416 aa17.7■□□□□ 0.42
TPM1-205ENST00000357980 RNF139Q8WU17 664 aa17.7■□□□□ 0.42
TPM1-205ENST00000357980 CASKIN2Q8WXE0 1202 aa17.7■□□□□ 0.42
TPM1-205ENST00000357980 ERP44Q9BS26 406 aa17.7■□□□□ 0.42
TPM1-205ENST00000357980 MAK16Q9BXY0 300 aaKnown RBP17.7■□□□□ 0.42
TPM1-205ENST00000357980 WDCPQ9H6R7 721 aa17.7■□□□□ 0.42
TPM1-205ENST00000357980 SFMBT1Q9UHJ3 866 aa17.7■□□□□ 0.42
TPM1-205ENST00000357980 NUDT5Q9UKK9 219 aa17.7■□□□□ 0.42
TPM1-205ENST00000357980 IRAK3Q9Y616 596 aa17.7■□□□□ 0.42
TPM1-205ENST00000357980 CEP290O15078 2479 aa17.7■□□□□ 0.42
TPM1-205ENST00000357980 C5orf67F2Z3F1 127 aa17.7■□□□□ 0.42
TPM1-205ENST00000357980 MSI1O43347 362 aaKnown RBP17.7■□□□□ 0.42
TPM1-205ENST00000357980 GOT1P17174 413 aa17.7■□□□□ 0.42
TPM1-205ENST00000357980 VCPP55072 806 aaKnown RBP17.7■□□□□ 0.42
TPM1-205ENST00000357980 BYSLQ13895 437 aaKnown RBP17.7■□□□□ 0.42
TPM1-205ENST00000357980 DUPD1Q68J44 220 aa17.7■□□□□ 0.42
TPM1-205ENST00000357980 FAM109BQ6ICB4 259 aaPredicted RBP17.7■□□□□ 0.42
TPM1-205ENST00000357980 SPRED2Q7Z698 418 aa17.7■□□□□ 0.42
TPM1-205ENST00000357980 ATL2Q8NHH9 583 aa17.7■□□□□ 0.42
TPM1-205ENST00000357980 MYRFLQ96LU7 910 aa17.7■□□□□ 0.42
TPM1-205ENST00000357980 C17orf80Q9BSJ5 609 aa17.7■□□□□ 0.42
TPM1-205ENST00000357980 UBE2OQ9C0C9 1292 aaKnown RBP17.7■□□□□ 0.42
TPM1-205ENST00000357980 TKTL2Q9H0I9 626 aa17.7■□□□□ 0.42
TPM1-205ENST00000357980 RAB17Q9H0T7 212 aa17.7■□□□□ 0.42
TPM1-205ENST00000357980 ALG13Q9NP73 1137 aaKnown RBP17.7■□□□□ 0.42
TPM1-205ENST00000357980 ARHGEF38Q9NXL2 777 aa17.7■□□□□ 0.42
TPM1-205ENST00000357980 RASAL2Q9UJF2 1139 aa17.7■□□□□ 0.42
TPM1-205ENST00000357980 UTP11Q9Y3A2 253 aaKnown RBP17.7■□□□□ 0.42
TPM1-205ENST00000357980 NEU2Q9Y3R4 380 aa17.7■□□□□ 0.42
TPM1-205ENST00000357980 ANAPC1Q9H1A4 1944 aa17.69■□□□□ 0.42
TPM1-205ENST00000357980 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP17.69■□□□□ 0.42
TPM1-205ENST00000357980 CXCL14O95715 111 aa17.69■□□□□ 0.42
TPM1-205ENST00000357980 CSH1P0DML2 217 aa17.69■□□□□ 0.42
TPM1-205ENST00000357980 CSH2P0DML3 217 aa17.69■□□□□ 0.42
TPM1-205ENST00000357980 RARGP13631 454 aa17.69■□□□□ 0.42
TPM1-205ENST00000357980 MYOGP15173 224 aa17.69■□□□□ 0.42
TPM1-205ENST00000357980 DNAJB1P25685 340 aa17.69■□□□□ 0.42
TPM1-205ENST00000357980 ALDH1A3P47895 512 aa17.69■□□□□ 0.42
TPM1-205ENST00000357980 CARSP49589 748 aaKnown RBP17.69■□□□□ 0.42
TPM1-205ENST00000357980 ERVFC1P60507 584 aa17.69■□□□□ 0.42
TPM1-205ENST00000357980 ARL13BQ3SXY8 428 aa17.69■□□□□ 0.42
TPM1-205ENST00000357980 BRMS1LQ5PSV4 323 aa17.69■□□□□ 0.42
TPM1-205ENST00000357980 TMC7Q7Z402 723 aa17.69■□□□□ 0.42
TPM1-205ENST00000357980 SPPL3Q8TCT6 385 aa17.69■□□□□ 0.42
TPM1-205ENST00000357980 TRAF3IP1Q8TDR0 691 aaPredicted RBP17.69■□□□□ 0.42
TPM1-205ENST00000357980 GRK7Q8WTQ7 553 aa17.69■□□□□ 0.42
TPM1-205ENST00000357980 OVCA2Q8WZ82 227 aa17.69■□□□□ 0.42
TPM1-205ENST00000357980 SERPINB11Q96P15 392 aa17.69■□□□□ 0.42
TPM1-205ENST00000357980 TCF25Q9BQ70 676 aa17.69■□□□□ 0.42
TPM1-205ENST00000357980 TMEM51Q9NW97 253 aa17.69■□□□□ 0.42
TPM1-205ENST00000357980 FEZ2Q9UHY8 353 aaPredicted RBP17.69■□□□□ 0.42
TPM1-205ENST00000357980 MAGED2Q9UNF1 606 aaPredicted RBP17.69■□□□□ 0.42
TPM1-205ENST00000357980 INSL5Q9Y5Q6 135 aa17.69■□□□□ 0.42
TPM1-205ENST00000357980 GRXCR1A8MXD5 290 aa17.68■□□□□ 0.42
TPM1-205ENST00000357980 FAM72CH0Y354 149 aa17.68■□□□□ 0.42
TPM1-205ENST00000357980 PRRG1O14668 218 aa17.68■□□□□ 0.42
TPM1-205ENST00000357980 APOL1O14791 398 aa17.68■□□□□ 0.42
TPM1-205ENST00000357980 ITGAVP06756 1048 aa17.68■□□□□ 0.42
TPM1-205ENST00000357980 TGM2P21980 687 aa17.68■□□□□ 0.42
TPM1-205ENST00000357980 ARL4AP40617 200 aa17.68■□□□□ 0.42
TPM1-205ENST00000357980 NNTQ13423 1086 aa17.68■□□□□ 0.42
TPM1-205ENST00000357980 PPP2R5DQ14738 602 aa17.68■□□□□ 0.42
TPM1-205ENST00000357980 NOMO1Q15155 1222 aa17.68■□□□□ 0.42
TPM1-205ENST00000357980 SHHQ15465 462 aa17.68■□□□□ 0.42
TPM1-205ENST00000357980 COL13A1Q5TAT6 717 aaPredicted RBP17.68■□□□□ 0.42
TPM1-205ENST00000357980 FAM72AQ5TYM5 149 aa17.68■□□□□ 0.42
TPM1-205ENST00000357980 SNX30Q5VWJ9 437 aa17.68■□□□□ 0.42
TPM1-205ENST00000357980 FAM72DQ6L9T8 149 aa17.68■□□□□ 0.42
TPM1-205ENST00000357980 LILRA6Q6PI73 481 aa17.68■□□□□ 0.42
TPM1-205ENST00000357980 SYDE1Q6ZW31 735 aaPredicted RBP17.68■□□□□ 0.42
TPM1-205ENST00000357980 FAM72BQ86X60 149 aa17.68■□□□□ 0.42
TPM1-205ENST00000357980 GSPT2Q8IYD1 628 aaKnown RBP17.68■□□□□ 0.42
TPM1-205ENST00000357980 EIF1ADQ8N9N8 165 aaKnown RBP17.68■□□□□ 0.42
TPM1-205ENST00000357980 TRMT2BQ96GJ1 504 aaKnown RBP17.68■□□□□ 0.42
TPM1-205ENST00000357980 ARHGEF4Q9NR80 690 aa17.68■□□□□ 0.42
TPM1-205ENST00000357980 OLA1Q9NTK5 396 aaKnown RBP17.68■□□□□ 0.42
TPM1-205ENST00000357980 DRG1Q9Y295 367 aaKnown RBP17.68■□□□□ 0.42
TPM1-205ENST00000357980 TLR6Q9Y2C9 796 aa17.68■□□□□ 0.42
TPM1-205ENST00000357980 OBSL1O75147 1896 aa17.68■□□□□ 0.42
TPM1-205ENST00000357980 MTCL1Q9Y4B5 1905 aaKnown RBP17.68■□□□□ 0.42
TPM1-205ENST00000357980 TGM5O43548 720 aa17.68■□□□□ 0.42
TPM1-205ENST00000357980 ERLIN1O75477 346 aa17.68■□□□□ 0.42
TPM1-205ENST00000357980 ECHS1P30084 290 aa17.68■□□□□ 0.42
TPM1-205ENST00000357980 CCR1P32246 355 aa17.68■□□□□ 0.42
TPM1-205ENST00000357980 ELF1P32519 619 aa17.68■□□□□ 0.42
TPM1-205ENST00000357980 DRG2P55039 364 aaKnown RBP17.68■□□□□ 0.42
TPM1-205ENST00000357980 TWF1Q12792 350 aa17.68■□□□□ 0.42
TPM1-205ENST00000357980 CUL1Q13616 776 aa17.68■□□□□ 0.42
TPM1-205ENST00000357980 DPYSQ14117 519 aa17.68■□□□□ 0.42
TPM1-205ENST00000357980 BEND6Q5SZJ8 279 aaPredicted RBP17.68■□□□□ 0.42
TPM1-205ENST00000357980 NPNTQ6UXI9 565 aa17.68■□□□□ 0.42
TPM1-205ENST00000357980 DDX42Q86XP3 938 aaKnown RBP eCLIP17.68■□□□□ 0.42
TPM1-205ENST00000357980 ZNF276Q8N554 614 aa17.68■□□□□ 0.42
TPM1-205ENST00000357980 SLC39A13Q96H72 371 aa17.68■□□□□ 0.42
TPM1-205ENST00000357980 CCDC114Q96M63 670 aa17.68■□□□□ 0.42
TPM1-205ENST00000357980 KLHL5Q96PQ7 755 aa17.68■□□□□ 0.42
TPM1-205ENST00000357980 KCNU1A8MYU2 1149 aa17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 35.8 ms