RNA–Protein interactions for RNA: ENST00000357388.7

SMC4-202, Transcript of structural maintenance of chromosomes 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC4, Length 5,471 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-202ENST00000357388 DARSP14868 501 aaKnown RBP13.18□□□□□ -0.3
SMC4-202ENST00000357388 PAICSP22234 425 aaKnown RBP13.18□□□□□ -0.3
SMC4-202ENST00000357388 CDK7P50613 346 aa13.18□□□□□ -0.3
SMC4-202ENST00000357388 EN1Q05925 392 aaPredicted RBP13.18□□□□□ -0.3
SMC4-202ENST00000357388 NFIXQ14938 502 aa13.18□□□□□ -0.3
SMC4-202ENST00000357388 PCSK7Q16549 785 aa13.18□□□□□ -0.3
SMC4-202ENST00000357388 ATF7IP2Q5U623 682 aa13.18□□□□□ -0.3
SMC4-202ENST00000357388 LIN54Q6MZP7 749 aa13.18□□□□□ -0.3
SMC4-202ENST00000357388 ANKRD13AQ8IZ07 590 aa13.18□□□□□ -0.3
SMC4-202ENST00000357388 OR7A2PQ8NGA2 310 aa13.18□□□□□ -0.3
SMC4-202ENST00000357388 EMILIN2Q9BXX0 1053 aa13.18□□□□□ -0.3
SMC4-202ENST00000357388 ADPRHL2Q9NX46 363 aa13.18□□□□□ -0.3
SMC4-202ENST00000357388 ING3Q9NXR8 418 aa13.18□□□□□ -0.3
SMC4-202ENST00000357388 SLC25A13Q9UJS0 675 aa13.18□□□□□ -0.3
SMC4-202ENST00000357388 NAGPAQ9UK23 515 aa13.18□□□□□ -0.3
SMC4-202ENST00000357388 NDUFAF1Q9Y375 327 aa13.18□□□□□ -0.3
SMC4-202ENST00000357388 PIK3CDO00329 1044 aa13.18□□□□□ -0.3
SMC4-202ENST00000357388 CYP27B1O15528 508 aa13.18□□□□□ -0.3
SMC4-202ENST00000357388 EXTL3O43909 919 aa13.18□□□□□ -0.3
SMC4-202ENST00000357388 NMT2O60551 498 aa13.18□□□□□ -0.3
SMC4-202ENST00000357388 CDC16Q13042 620 aa13.18□□□□□ -0.3
SMC4-202ENST00000357388 GALNTL6Q49A17 601 aa13.18□□□□□ -0.3
SMC4-202ENST00000357388 TFDP3Q5H9I0 405 aa13.18□□□□□ -0.3
SMC4-202ENST00000357388 TTC23Q5W5X9 447 aa13.18□□□□□ -0.3
SMC4-202ENST00000357388 MRPS31Q92665 395 aaKnown RBP13.18□□□□□ -0.3
SMC4-202ENST00000357388 APOPT1Q96IL0 206 aa13.18□□□□□ -0.3
SMC4-202ENST00000357388 POLR1BQ9H9Y6 1135 aa13.18□□□□□ -0.3
SMC4-202ENST00000357388 SHOC2Q9UQ13 582 aa13.18□□□□□ -0.3
SMC4-202ENST00000357388 SH3GLB1Q9Y371 365 aa13.18□□□□□ -0.3
SMC4-202ENST00000357388 GUCY1B2O75343 617 aa13.18□□□□□ -0.3
SMC4-202ENST00000357388 HLA-DRAP01903 254 aa13.18□□□□□ -0.3
SMC4-202ENST00000357388 CNPP09543 421 aaKnown RBP13.18□□□□□ -0.3
SMC4-202ENST00000357388 IL12AP29459 219 aa13.18□□□□□ -0.3
SMC4-202ENST00000357388 RGS7P49802 495 aa13.18□□□□□ -0.3
SMC4-202ENST00000357388 MYBPC2Q14324 1141 aa13.18□□□□□ -0.3
SMC4-202ENST00000357388 UTP15Q8TED0 518 aaKnown RBP13.18□□□□□ -0.3
SMC4-202ENST00000357388 CINPQ9BW66 212 aaPredicted RBP13.18□□□□□ -0.3
SMC4-202ENST00000357388 EPB41L4BQ9H329 900 aa13.18□□□□□ -0.3
SMC4-202ENST00000357388 KCTD10Q9H3F6 313 aa13.18□□□□□ -0.3
SMC4-202ENST00000357388 ZNF559-ZNF177A0A0A6YYI6 481 aaPredicted RBP13.17□□□□□ -0.3
SMC4-202ENST00000357388 E2F8A0AVK6 867 aa13.17□□□□□ -0.3
SMC4-202ENST00000357388 MGAT4DA6NG13 374 aa13.17□□□□□ -0.3
SMC4-202ENST00000357388 ZW10O43264 779 aa13.17□□□□□ -0.3
SMC4-202ENST00000357388 SYNCRIPO60506 623 aaKnown RBP13.17□□□□□ -0.3
SMC4-202ENST00000357388 GSTM1P09488 218 aa13.17□□□□□ -0.3
SMC4-202ENST00000357388 CDH3P22223 829 aa13.17□□□□□ -0.3
SMC4-202ENST00000357388 TAF6P49848 677 aa13.17□□□□□ -0.3
SMC4-202ENST00000357388 ZNF177Q13360 481 aaPredicted RBP13.17□□□□□ -0.3
SMC4-202ENST00000357388 C5orf22Q49AR2 442 aa13.17□□□□□ -0.3
SMC4-202ENST00000357388 MACC1Q6ZN28 852 aa13.17□□□□□ -0.3
SMC4-202ENST00000357388 AADATQ8N5Z0 425 aa13.17□□□□□ -0.3
SMC4-202ENST00000357388 FAM151AQ8WW52 585 aa13.17□□□□□ -0.3
SMC4-202ENST00000357388 TMEM143Q96AN5 459 aa13.17□□□□□ -0.3
SMC4-202ENST00000357388 SLC25A23Q9BV35 468 aa13.17□□□□□ -0.3
SMC4-202ENST00000357388 ZNF518BQ9C0D4 1074 aa13.17□□□□□ -0.3
SMC4-202ENST00000357388 GPC1P35052 558 aa13.17□□□□□ -0.3
SMC4-202ENST00000357388 SLC1A6P48664 564 aa13.17□□□□□ -0.3
SMC4-202ENST00000357388 ZDHHC13Q8IUH4 622 aa13.17□□□□□ -0.3
SMC4-202ENST00000357388 PGM2Q96G03 612 aa13.17□□□□□ -0.3
SMC4-202ENST00000357388 KCNK4Q9NYG8 393 aa13.17□□□□□ -0.3
SMC4-202ENST00000357388 PDGFRBP09619 1106 aa13.17□□□□□ -0.3
SMC4-202ENST00000357388 GZMAP12544 262 aa13.17□□□□□ -0.3
SMC4-202ENST00000357388 CSNK2BP67870 215 aa13.17□□□□□ -0.3
SMC4-202ENST00000357388 TSC22D1Q15714 1073 aa13.17□□□□□ -0.3
SMC4-202ENST00000357388 INO80DQ53TQ3 878 aaPredicted RBP13.17□□□□□ -0.3
SMC4-202ENST00000357388 GPAT2Q6NUI2 795 aa13.17□□□□□ -0.3
SMC4-202ENST00000357388 HHIPL2Q6UWX4 724 aa13.17□□□□□ -0.3
SMC4-202ENST00000357388 SIX5Q8N196 739 aa13.17□□□□□ -0.3
SMC4-202ENST00000357388 EXD1Q8NHP7 514 aa13.17□□□□□ -0.3
SMC4-202ENST00000357388 BORCS5Q969J3 196 aa13.17□□□□□ -0.3
SMC4-202ENST00000357388 COPS7BQ9H9Q2 264 aaPredicted RBP13.17□□□□□ -0.3
SMC4-202ENST00000357388 ZC3H11AO75152 810 aaKnown RBP eCLIP13.17□□□□□ -0.35e-7■■■■■ 90.5
SMC4-202ENST00000357388 ADSSP30520 456 aa13.17□□□□□ -0.3
SMC4-202ENST00000357388 GJA8P48165 433 aa13.17□□□□□ -0.3
SMC4-202ENST00000357388 MGAT5Q09328 741 aa13.17□□□□□ -0.3
SMC4-202ENST00000357388 GRIK3Q13003 919 aa13.17□□□□□ -0.3
SMC4-202ENST00000357388 ZNF284Q2VY69 593 aa13.17□□□□□ -0.3
SMC4-202ENST00000357388 PGS1Q32NB8 556 aa13.17□□□□□ -0.3
SMC4-202ENST00000357388 SWT1Q5T5J6 900 aaKnown RBP13.17□□□□□ -0.3
SMC4-202ENST00000357388 GRTP1Q5TC63 336 aa13.17□□□□□ -0.3
SMC4-202ENST00000357388 SERBP1Q8NC51 408 aaKnown RBP eCLIP13.17□□□□□ -0.3
SMC4-202ENST00000357388 PPP1R14BQ96C90 147 aa13.17□□□□□ -0.3
SMC4-202ENST00000357388 FAM84BQ96KN1 310 aaPredicted RBP13.17□□□□□ -0.3
SMC4-202ENST00000357388 B3GALT6Q96L58 329 aa13.17□□□□□ -0.3
SMC4-202ENST00000357388 GRIP2Q9C0E4 1043 aa13.17□□□□□ -0.3
SMC4-202ENST00000357388 RERGLQ9H628 205 aa13.17□□□□□ -0.3
SMC4-202ENST00000357388 ATP6V1HQ9UI12 483 aa13.17□□□□□ -0.3
SMC4-202ENST00000357388 BCLAF3A2AJT9 711 aaKnown RBP13.16□□□□□ -0.3
SMC4-202ENST00000357388 C17orf102A2RUQ5 167 aa13.16□□□□□ -0.3
SMC4-202ENST00000357388 POLRMTO00411 1230 aaKnown RBP13.16□□□□□ -0.3
SMC4-202ENST00000357388 GPR182O15218 404 aa13.16□□□□□ -0.3
SMC4-202ENST00000357388 HS6ST1O60243 411 aa13.16□□□□□ -0.3
SMC4-202ENST00000357388 S100A6P06703 90 aa13.16□□□□□ -0.3
SMC4-202ENST00000357388 ZNF543Q08ER8 600 aa13.16□□□□□ -0.3
SMC4-202ENST00000357388 RIPOR1Q6ZS17 1223 aa13.16□□□□□ -0.3
SMC4-202ENST00000357388 SGF29Q96ES7 293 aa13.16□□□□□ -0.3
SMC4-202ENST00000357388 ISCA1Q9BUE6 129 aa13.16□□□□□ -0.3
SMC4-202ENST00000357388 UBQLN1Q9UMX0 589 aaKnown RBP13.16□□□□□ -0.3
SMC4-202ENST00000357388 CDC42BPGQ6DT37 1551 aa13.16□□□□□ -0.3
SMC4-202ENST00000357388 MYMKA6NI61 221 aa13.16□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms