RNA–Protein interactions for RNA: ENST00000357376.7

RTN4-203, Transcript of reticulon 4, humanhuman

TSL 1 (best) BASIC

Gene RTN4, Length 4,110 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN4-203ENST00000357376 HES2Q9Y543 173 aa7.04□□□□□ -1.28
RTN4-203ENST00000357376 CDY2AQ9Y6F7 541 aa7.04□□□□□ -1.28
RTN4-203ENST00000357376 CDY1Q9Y6F8 540 aa7.04□□□□□ -1.28
RTN4-203ENST00000357376 CASQ2O14958 399 aaPredicted RBP7.04□□□□□ -1.28
RTN4-203ENST00000357376 TYROBPO43914 113 aa7.04□□□□□ -1.28
RTN4-203ENST00000357376 TBX10O75333 385 aa7.04□□□□□ -1.28
RTN4-203ENST00000357376 SMNDC1O75940 238 aaKnown RBP eCLIP7.04□□□□□ -1.282e-15■■■□□ 16
RTN4-203ENST00000357376 CCDC130P13994 396 aa7.04□□□□□ -1.28
RTN4-203ENST00000357376 ANPEPP15144 967 aa7.04□□□□□ -1.28
RTN4-203ENST00000357376 ARL2P36404 184 aa7.04□□□□□ -1.28
RTN4-203ENST00000357376 GNL1P36915 607 aaPredicted RBP7.04□□□□□ -1.28
RTN4-203ENST00000357376 RANBP1P43487 201 aa7.04□□□□□ -1.28
RTN4-203ENST00000357376 TMED1Q13445 227 aa7.04□□□□□ -1.28
RTN4-203ENST00000357376 MOGSQ13724 837 aa7.04□□□□□ -1.28
RTN4-203ENST00000357376 TTC39CQ8N584 583 aa7.04□□□□□ -1.28
RTN4-203ENST00000357376 MAB21L3Q8N8X9 362 aa7.04□□□□□ -1.28
RTN4-203ENST00000357376 C1orf127Q8N9H9 656 aa7.04□□□□□ -1.28
RTN4-203ENST00000357376 DCAKDQ8WVC6 231 aa7.04□□□□□ -1.28
RTN4-203ENST00000357376 FSD1LQ9BXM9 530 aa7.04□□□□□ -1.28
RTN4-203ENST00000357376 SHANK3Q9BYB0 1731 aa7.04□□□□□ -1.28
RTN4-203ENST00000357376 SUDS3Q9H7L9 328 aaPredicted RBP7.04□□□□□ -1.28
RTN4-203ENST00000357376 PLLPQ9Y342 182 aa7.04□□□□□ -1.28
RTN4-203ENST00000357376 DTNAQ9Y4J8 743 aa7.04□□□□□ -1.28
RTN4-203ENST00000357376 CNTNAP1P78357 1384 aa7.04□□□□□ -1.28
RTN4-203ENST00000357376 PHLPP1O60346 1717 aa7.04□□□□□ -1.28
RTN4-203ENST00000357376 CXorf49A8MYA2 514 aaPredicted RBP7.04□□□□□ -1.28
RTN4-203ENST00000357376 RNF103O00237 685 aa7.04□□□□□ -1.28
RTN4-203ENST00000357376 GAS2O43903 313 aaKnown RBP7.04□□□□□ -1.28
RTN4-203ENST00000357376 FARP2O94887 1054 aaPredicted RBP7.04□□□□□ -1.28
RTN4-203ENST00000357376 MT-CO1P00395 513 aa7.04□□□□□ -1.28
RTN4-203ENST00000357376 ETS2P15036 469 aa7.04□□□□□ -1.28
RTN4-203ENST00000357376 RAG1P15918 1043 aa7.04□□□□□ -1.28
RTN4-203ENST00000357376 STX1BP61266 288 aa7.04□□□□□ -1.28
RTN4-203ENST00000357376 FSTL1Q12841 308 aa7.04□□□□□ -1.28
RTN4-203ENST00000357376 PDK1Q15118 436 aa7.04□□□□□ -1.28
RTN4-203ENST00000357376 KIF19Q2TAC6 998 aa7.04□□□□□ -1.28
RTN4-203ENST00000357376 IYDQ6PHW0 289 aa7.04□□□□□ -1.28
RTN4-203ENST00000357376 CMC1Q7Z7K0 106 aa7.04□□□□□ -1.28
RTN4-203ENST00000357376 PLD5Q8N7P1 536 aa7.04□□□□□ -1.28
RTN4-203ENST00000357376 APPL2Q8NEU8 664 aa7.04□□□□□ -1.28
RTN4-203ENST00000357376 SH3TC2Q8TF17 1288 aa7.04□□□□□ -1.28
RTN4-203ENST00000357376 GDPD5Q8WTR4 605 aa7.04□□□□□ -1.28
RTN4-203ENST00000357376 TWNKQ96RR1 684 aa7.04□□□□□ -1.28
RTN4-203ENST00000357376 EBF4Q9BQW3 602 aa7.04□□□□□ -1.28
RTN4-203ENST00000357376 CYP3A43Q9HB55 503 aa7.04□□□□□ -1.28
RTN4-203ENST00000357376 SNTG2Q9NY99 539 aa7.04□□□□□ -1.28
RTN4-203ENST00000357376 BTBD7Q9P203 1132 aa7.04□□□□□ -1.28
RTN4-203ENST00000357376 DCDC2Q9UHG0 476 aa7.04□□□□□ -1.28
RTN4-203ENST00000357376 FAF1Q9UNN5 650 aaPredicted RBP7.04□□□□□ -1.28
RTN4-203ENST00000357376 GIPC1O14908 333 aa7.03□□□□□ -1.28
RTN4-203ENST00000357376 NOL3O60936 208 aaKnown RBP7.03□□□□□ -1.28
RTN4-203ENST00000357376 SERPINE1P05121 402 aa7.03□□□□□ -1.28
RTN4-203ENST00000357376 F7P08709 466 aaPredicted RBP7.03□□□□□ -1.28
RTN4-203ENST00000357376 ACAT1P24752 427 aaKnown RBP7.03□□□□□ -1.28
RTN4-203ENST00000357376 MSX2P35548 267 aaPredicted RBP7.03□□□□□ -1.28
RTN4-203ENST00000357376 ATXN1P54253 815 aaKnown RBP7.03□□□□□ -1.28
RTN4-203ENST00000357376 OAZ1P54368 228 aa7.03□□□□□ -1.28
RTN4-203ENST00000357376 SLC6A3Q01959 620 aa7.03□□□□□ -1.28
RTN4-203ENST00000357376 USP4Q13107 963 aa7.03□□□□□ -1.28
RTN4-203ENST00000357376 TBCCQ15814 346 aa7.03□□□□□ -1.28
RTN4-203ENST00000357376 VWA5B1Q5TIE3 1220 aa7.03□□□□□ -1.28
RTN4-203ENST00000357376 ANO7Q6IWH7 933 aa7.03□□□□□ -1.28
RTN4-203ENST00000357376 CATSPERGQ6ZRH7 1159 aa7.03□□□□□ -1.28
RTN4-203ENST00000357376 TRIM67Q6ZTA4 783 aa7.03□□□□□ -1.28
RTN4-203ENST00000357376 ASRGL1Q7L266 308 aa7.03□□□□□ -1.28
RTN4-203ENST00000357376 DEFB132Q7Z7B7 95 aa7.03□□□□□ -1.28
RTN4-203ENST00000357376 KIAA0319LQ8IZA0 1049 aa7.03□□□□□ -1.28
RTN4-203ENST00000357376 UNC5BQ8IZJ1 945 aa7.03□□□□□ -1.28
RTN4-203ENST00000357376 SLC7A6OSQ96CW6 309 aaPredicted RBP7.03□□□□□ -1.28
RTN4-203ENST00000357376 GCNAQ96QF7 691 aa7.03□□□□□ -1.28
RTN4-203ENST00000357376 ZCWPW1Q9H0M4 648 aa7.03□□□□□ -1.28
RTN4-203ENST00000357376 NRDE2Q9H7Z3 1164 aa7.03□□□□□ -1.28
RTN4-203ENST00000357376 PCDH18Q9HCL0 1135 aa7.03□□□□□ -1.28
RTN4-203ENST00000357376 XPNPEP3Q9NQH7 507 aa7.03□□□□□ -1.28
RTN4-203ENST00000357376 IARS2Q9NSE4 1012 aaKnown RBP7.03□□□□□ -1.28
RTN4-203ENST00000357376 PNPOQ9NVS9 261 aa7.03□□□□□ -1.28
RTN4-203ENST00000357376 ZNF214Q9UL59 606 aaPredicted RBP7.03□□□□□ -1.28
RTN4-203ENST00000357376 CSH1P0DML2 217 aa7.03□□□□□ -1.28
RTN4-203ENST00000357376 CSH2P0DML3 217 aa7.03□□□□□ -1.28
RTN4-203ENST00000357376 GOT1P17174 413 aa7.03□□□□□ -1.28
RTN4-203ENST00000357376 SP100P23497 879 aaPredicted RBP7.03□□□□□ -1.28
RTN4-203ENST00000357376 AKAP5P24588 427 aa7.03□□□□□ -1.28
RTN4-203ENST00000357376 PSMB4P28070 264 aa7.03□□□□□ -1.28
RTN4-203ENST00000357376 GRIA1P42261 906 aa7.03□□□□□ -1.28
RTN4-203ENST00000357376 ASPAP45381 313 aa7.03□□□□□ -1.28
RTN4-203ENST00000357376 PRAMEP78395 509 aa7.03□□□□□ -1.28
RTN4-203ENST00000357376 CCNA1P78396 465 aa7.03□□□□□ -1.28
RTN4-203ENST00000357376 ZNF252P-AS1Q0IIN9 211 aa7.03□□□□□ -1.28
RTN4-203ENST00000357376 ANKRD20A4Q4UJ75 823 aa7.03□□□□□ -1.28
RTN4-203ENST00000357376 PPP1R26Q5T8A7 1209 aaPredicted RBP7.03□□□□□ -1.28
RTN4-203ENST00000357376 LPCAT4Q643R3 524 aa7.03□□□□□ -1.28
RTN4-203ENST00000357376 ARHGAP18Q8N392 663 aa7.03□□□□□ -1.28
RTN4-203ENST00000357376 SLC4A11Q8NBS3 891 aa7.03□□□□□ -1.28
RTN4-203ENST00000357376 REPS2Q8NFH8 660 aa7.03□□□□□ -1.28
RTN4-203ENST00000357376 IPMKQ8NFU5 416 aa7.03□□□□□ -1.28
RTN4-203ENST00000357376 GABPB2Q8TAK5 448 aaPredicted RBP7.03□□□□□ -1.28
RTN4-203ENST00000357376 UTP4Q969X6 686 aaKnown RBP7.03□□□□□ -1.28
RTN4-203ENST00000357376 EME1Q96AY2 570 aa7.03□□□□□ -1.28
RTN4-203ENST00000357376 TNIP3Q96KP6 325 aa7.03□□□□□ -1.28
RTN4-203ENST00000357376 EBNA1BP2Q99848 306 aaKnown RBP7.03□□□□□ -1.28
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms