RNA–Protein interactions for RNA: ENST00000356083.7

COL27A1-201, Transcript of collagen type XXVII alpha 1 chain, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene COL27A1, Length 7,790 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-201ENST00000356083 CDC40O60508 579 aaKnown RBP eCLIP17.68■□□□□ 0.423e-6■■■□□ 16.2
COL27A1-201ENST00000356083 EPORP19235 508 aa17.68■□□□□ 0.42
COL27A1-201ENST00000356083 ITGA8P53708 1063 aa17.68■□□□□ 0.42
COL27A1-201ENST00000356083 MAPK10P53779 464 aa17.68■□□□□ 0.42
COL27A1-201ENST00000356083 GPAT3Q53EU6 434 aa17.68■□□□□ 0.42
COL27A1-201ENST00000356083 SYDE1Q6ZW31 735 aaPredicted RBP17.68■□□□□ 0.42
COL27A1-201ENST00000356083 ULK2Q8IYT8 1036 aa17.68■□□□□ 0.42
COL27A1-201ENST00000356083 CDADC1Q9BWV3 514 aa17.68■□□□□ 0.42
COL27A1-201ENST00000356083 VPS45Q9NRW7 570 aa17.68■□□□□ 0.42
COL27A1-201ENST00000356083 CYP2A7P20853 494 aa17.68■□□□□ 0.42
COL27A1-201ENST00000356083 CCT3P49368 545 aaKnown RBP17.68■□□□□ 0.42
COL27A1-201ENST00000356083 TAF2Q6P1X5 1199 aa17.68■□□□□ 0.42
COL27A1-201ENST00000356083 FNDC5Q8NAU1 212 aa17.68■□□□□ 0.42
COL27A1-201ENST00000356083 TINF2Q9BSI4 451 aa17.68■□□□□ 0.42
COL27A1-201ENST00000356083 GRIP2Q9C0E4 1043 aa17.68■□□□□ 0.42
COL27A1-201ENST00000356083 CPA4Q9UI42 421 aa17.68■□□□□ 0.42
COL27A1-201ENST00000356083 COL15A1P39059 1388 aa17.68■□□□□ 0.42
COL27A1-201ENST00000356083 CYP2F1P24903 491 aa17.68■□□□□ 0.42
COL27A1-201ENST00000356083 HNF4AP41235 474 aa17.68■□□□□ 0.42
COL27A1-201ENST00000356083 ZKSCAN4Q969J2 545 aaPredicted RBP17.68■□□□□ 0.42
COL27A1-201ENST00000356083 RELTQ969Z4 430 aa17.68■□□□□ 0.42
COL27A1-201ENST00000356083 CEP41Q9BYV8 373 aa17.68■□□□□ 0.42
COL27A1-201ENST00000356083 GRIN3AQ8TCU5 1115 aa17.68■□□□□ 0.42
COL27A1-201ENST00000356083 SLC9A6Q92581 669 aa17.68■□□□□ 0.42
COL27A1-201ENST00000356083 JSRP1Q96MG2 331 aaPredicted RBP17.68■□□□□ 0.42
COL27A1-201ENST00000356083 EPB41L4BQ9H329 900 aa17.68■□□□□ 0.42
COL27A1-201ENST00000356083 SPG21Q9NZD8 308 aa17.68■□□□□ 0.42
COL27A1-201ENST00000356083 VPS51Q9UID3 782 aa17.68■□□□□ 0.42
COL27A1-201ENST00000356083 MYH14Q7Z406 1995 aaKnown RBP17.68■□□□□ 0.42
COL27A1-201ENST00000356083 PDS5AQ29RF7 1337 aaKnown RBP17.68■□□□□ 0.42
COL27A1-201ENST00000356083 CDH16O75309 829 aa17.67■□□□□ 0.42
COL27A1-201ENST00000356083 ITGALP20701 1170 aa17.67■□□□□ 0.42
COL27A1-201ENST00000356083 GPR15P49685 360 aa17.67■□□□□ 0.42
COL27A1-201ENST00000356083 NDUFA5Q16718 116 aa17.67■□□□□ 0.42
COL27A1-201ENST00000356083 AGKQ53H12 422 aa17.67■□□□□ 0.42
COL27A1-201ENST00000356083 FBXL19Q6PCT2 694 aa17.67■□□□□ 0.42
COL27A1-201ENST00000356083 SKP1P63208 163 aa17.67■□□□□ 0.42
COL27A1-201ENST00000356083 EXOSC10Q01780 885 aaKnown RBP17.67■□□□□ 0.42
COL27A1-201ENST00000356083 EZH2Q15910 746 aaKnown RBP17.67■□□□□ 0.42
COL27A1-201ENST00000356083 AASDHPPTQ9NRN7 309 aa17.67■□□□□ 0.42
COL27A1-201ENST00000356083 IFNA14P01570 189 aa17.67■□□□□ 0.42
COL27A1-201ENST00000356083 ATP2C1P98194 919 aaPredicted RBP17.67■□□□□ 0.42
COL27A1-201ENST00000356083 GRM4Q14833 912 aa17.67■□□□□ 0.42
COL27A1-201ENST00000356083 FAM171A1Q5VUB5 890 aa17.67■□□□□ 0.42
COL27A1-201ENST00000356083 ENKURQ8TC29 256 aa17.67■□□□□ 0.42
COL27A1-201ENST00000356083 GAL3ST3Q96A11 431 aa17.67■□□□□ 0.42
COL27A1-201ENST00000356083 MYOZ2Q9NPC6 264 aa17.67■□□□□ 0.42
COL27A1-201ENST00000356083 GPR108Q9NPR9 543 aa17.67■□□□□ 0.42
COL27A1-201ENST00000356083 TMEM120BA0PK00 339 aa17.67■□□□□ 0.42
COL27A1-201ENST00000356083 PPM1LQ5SGD2 360 aa17.67■□□□□ 0.42
COL27A1-201ENST00000356083 TMEM26Q6ZUK4 368 aa17.67■□□□□ 0.42
COL27A1-201ENST00000356083 MYH8P13535 1937 aa17.67■□□□□ 0.42
COL27A1-201ENST00000356083 BCLAF3A2AJT9 711 aaKnown RBP17.67■□□□□ 0.42
COL27A1-201ENST00000356083 STX5Q13190 355 aa17.67■□□□□ 0.42
COL27A1-201ENST00000356083 MTF1Q14872 753 aa17.67■□□□□ 0.42
COL27A1-201ENST00000356083 PRMT7Q9NVM4 692 aaPredicted RBP17.67■□□□□ 0.42
COL27A1-201ENST00000356083 PTPN3P26045 913 aa17.67■□□□□ 0.42
COL27A1-201ENST00000356083 LGALS3BPQ08380 585 aa17.67■□□□□ 0.42
COL27A1-201ENST00000356083 PLD1Q13393 1074 aa17.67■□□□□ 0.42
COL27A1-201ENST00000356083 EID3Q8N140 333 aa17.67■□□□□ 0.42
COL27A1-201ENST00000356083 NSL1Q96IY1 281 aa17.67■□□□□ 0.42
COL27A1-201ENST00000356083 PSMD11O00231 422 aa17.66■□□□□ 0.42
COL27A1-201ENST00000356083 IRX1P78414 480 aaPredicted RBP17.66■□□□□ 0.42
COL27A1-201ENST00000356083 GRB14Q14449 540 aa17.66■□□□□ 0.42
COL27A1-201ENST00000356083 ELMO1Q92556 727 aa17.66■□□□□ 0.42
COL27A1-201ENST00000356083 TUT1Q9H6E5 874 aaKnown RBP17.66■□□□□ 0.42
COL27A1-201ENST00000356083 COMMD8Q9NX08 183 aa17.66■□□□□ 0.42
COL27A1-201ENST00000356083 EFCAB10A6NFE3 127 aa17.66■□□□□ 0.42
COL27A1-201ENST00000356083 MTSS1O43312 755 aa17.66■□□□□ 0.42
COL27A1-201ENST00000356083 KPNA6O60684 536 aa17.66■□□□□ 0.42
COL27A1-201ENST00000356083 FICDQ9BVA6 458 aa17.66■□□□□ 0.42
COL27A1-201ENST00000356083 CCSER1Q9C0I3 900 aa17.66■□□□□ 0.42
COL27A1-201ENST00000356083 ERBB4Q15303 1308 aa17.66■□□□□ 0.42
COL27A1-201ENST00000356083 LOC100506127A0A0U1RQW1 187 aa17.66■□□□□ 0.42
COL27A1-201ENST00000356083 C1orf232A0A0U1RR37 186 aa17.66■□□□□ 0.42
COL27A1-201ENST00000356083 PIK3CDO00329 1044 aa17.66■□□□□ 0.42
COL27A1-201ENST00000356083 INPP4BO15327 924 aa17.66■□□□□ 0.42
COL27A1-201ENST00000356083 UQCRBP14927 111 aa17.66■□□□□ 0.42
COL27A1-201ENST00000356083 COMTP21964 271 aa17.66■□□□□ 0.42
COL27A1-201ENST00000356083 GJB7Q6PEY0 223 aa17.66■□□□□ 0.42
COL27A1-201ENST00000356083 RBM23Q86U06 439 aaKnown RBP17.66■□□□□ 0.42
COL27A1-201ENST00000356083 OSCP1Q8WVF1 389 aa17.66■□□□□ 0.42
COL27A1-201ENST00000356083 NRDE2Q9H7Z3 1164 aa17.66■□□□□ 0.42
COL27A1-201ENST00000356083 ANKARQ7Z5J8 1434 aa17.66■□□□□ 0.42
COL27A1-201ENST00000356083 TRIM49D1C9J1S8 452 aa17.66■□□□□ 0.42
COL27A1-201ENST00000356083 RPL4P36578 427 aaKnown RBP17.66■□□□□ 0.42
COL27A1-201ENST00000356083 GLT6D1Q7Z4J2 308 aa17.66■□□□□ 0.42
COL27A1-201ENST00000356083 KLHL41O60662 606 aa17.66■□□□□ 0.42
COL27A1-201ENST00000356083 KLK7P49862 253 aa17.66■□□□□ 0.42
COL27A1-201ENST00000356083 C21orf59P57076 290 aa17.66■□□□□ 0.42
COL27A1-201ENST00000356083 STK4Q13043 487 aa17.66■□□□□ 0.42
COL27A1-201ENST00000356083 SEL1L3Q68CR1 1132 aa17.66■□□□□ 0.42
COL27A1-201ENST00000356083 DSELQ8IZU8 1212 aa17.66■□□□□ 0.42
COL27A1-201ENST00000356083 RMND5BQ96G75 393 aaPredicted RBP17.66■□□□□ 0.42
COL27A1-201ENST00000356083 COMMD9Q9P000 198 aa17.66■□□□□ 0.42
COL27A1-201ENST00000356083 CCDC54Q8NEL0 328 aa17.66■□□□□ 0.42
COL27A1-201ENST00000356083 OR10G6Q8NH81 332 aa17.66■□□□□ 0.42
COL27A1-201ENST00000356083 NARFQ9UHQ1 456 aa17.66■□□□□ 0.42
COL27A1-201ENST00000356083 OR10H1Q9Y4A9 318 aa17.66■□□□□ 0.42
COL27A1-201ENST00000356083 C19orf81C9J6K1 198 aa17.65■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms