RNA–Protein interactions for RNA: ENST00000354822.6

NKX2-1-201, Transcript of NK2 homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene NKX2-1, Length 2,191 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NKX2-1-201ENST00000354822 RNF19AQ9NV58 838 aa23.02■■□□□ 1.28
NKX2-1-201ENST00000354822 USP3Q9Y6I4 520 aa23.02■■□□□ 1.28
NKX2-1-201ENST00000354822 KLF11O14901 512 aa23.01■■□□□ 1.27
NKX2-1-201ENST00000354822 NEFHP12036 1026 aa23.01■■□□□ 1.27
NKX2-1-201ENST00000354822 MLNP12872 115 aa23.01■■□□□ 1.27
NKX2-1-201ENST00000354822 PRAMEF19Q5SWL8 479 aa23.01■■□□□ 1.27
NKX2-1-201ENST00000354822 ZNF618Q5T7W0 954 aa23.01■■□□□ 1.27
NKX2-1-201ENST00000354822 UNC5AQ6ZN44 842 aa23.01■■□□□ 1.27
NKX2-1-201ENST00000354822 PIGZQ86VD9 579 aa23.01■■□□□ 1.27
NKX2-1-201ENST00000354822 DEFB106AQ8N104 65 aa23.01■■□□□ 1.27
NKX2-1-201ENST00000354822 OLFM3Q96PB7 478 aa23.01■■□□□ 1.27
NKX2-1-201ENST00000354822 TACO1Q9BSH4 297 aaKnown RBP23.01■■□□□ 1.27
NKX2-1-201ENST00000354822 RNF39Q9H2S5 420 aa23.01■■□□□ 1.27
NKX2-1-201ENST00000354822 DAB1O75553 588 aa23.01■■□□□ 1.27
NKX2-1-201ENST00000354822 ZNF189O75820 626 aaPredicted RBP23.01■■□□□ 1.27
NKX2-1-201ENST00000354822 STK10O94804 968 aaKnown RBP23.01■■□□□ 1.27
NKX2-1-201ENST00000354822 AMPD1P23109 780 aa23.01■■□□□ 1.27
NKX2-1-201ENST00000354822 LRPAP1P30533 357 aa23.01■■□□□ 1.27
NKX2-1-201ENST00000354822 NOS2P35228 1153 aa23.01■■□□□ 1.27
NKX2-1-201ENST00000354822 SULT1E1P49888 294 aa23.01■■□□□ 1.27
NKX2-1-201ENST00000354822 SERPINB9P50453 376 aa23.01■■□□□ 1.27
NKX2-1-201ENST00000354822 HUNKP57058 714 aa23.01■■□□□ 1.27
NKX2-1-201ENST00000354822 CCDC91Q7Z6B0 441 aa23.01■■□□□ 1.27
NKX2-1-201ENST00000354822 KCTD13Q8WZ19 329 aa23.01■■□□□ 1.27
NKX2-1-201ENST00000354822 TUBB6Q9BUF5 446 aa23.01■■□□□ 1.27
NKX2-1-201ENST00000354822 KATNAL1Q9BW62 490 aa23.01■■□□□ 1.27
NKX2-1-201ENST00000354822 MKS1Q9NXB0 559 aa23.01■■□□□ 1.27
NKX2-1-201ENST00000354822 IPPQ9Y573 584 aa23.01■■□□□ 1.27
NKX2-1-201ENST00000354822 PCDHA11Q9Y5I1 949 aa23.01■■□□□ 1.27
NKX2-1-201ENST00000354822 MAD1L1Q9Y6D9 718 aa23.01■■□□□ 1.27
NKX2-1-201ENST00000354822 A0A0A0MRY4 1105 aa23■■□□□ 1.27
NKX2-1-201ENST00000354822 TREHO43280 583 aa23■■□□□ 1.27
NKX2-1-201ENST00000354822 GNAT1P11488 350 aa23■■□□□ 1.27
NKX2-1-201ENST00000354822 GOT1P17174 413 aa23■■□□□ 1.27
NKX2-1-201ENST00000354822 MRPS5P82675 430 aaKnown RBP23■■□□□ 1.27
NKX2-1-201ENST00000354822 ZNF534Q76KX8 674 aa23■■□□□ 1.27
NKX2-1-201ENST00000354822 NT5C3BQ969T7 300 aa23■■□□□ 1.27
NKX2-1-201ENST00000354822 SPATA13Q96N96 652 aa23■■□□□ 1.27
NKX2-1-201ENST00000354822 SRPK1Q96SB4 655 aaKnown RBP23■■□□□ 1.27
NKX2-1-201ENST00000354822 PLAC1Q9HBJ0 212 aa23■■□□□ 1.27
NKX2-1-201ENST00000354822 ZFP69BQ9UJL9 534 aa23■■□□□ 1.27
NKX2-1-201ENST00000354822 STAP1Q9ULZ2 295 aa23■■□□□ 1.27
NKX2-1-201ENST00000354822 STK38LQ9Y2H1 464 aa23■■□□□ 1.27
NKX2-1-201ENST00000354822 FAM159BA6NKW6 160 aa23■■□□□ 1.27
NKX2-1-201ENST00000354822 VGLL3A8MV65 326 aa23■■□□□ 1.27
NKX2-1-201ENST00000354822 CXorf49A8MYA2 514 aaPredicted RBP23■■□□□ 1.27
NKX2-1-201ENST00000354822 CCND1P24385 295 aa23■■□□□ 1.27
NKX2-1-201ENST00000354822 SERPINB4P48594 390 aa23■■□□□ 1.27
NKX2-1-201ENST00000354822 SOX4Q06945 474 aaPredicted RBP23■■□□□ 1.27
NKX2-1-201ENST00000354822 HIC1Q14526 733 aa23■■□□□ 1.27
NKX2-1-201ENST00000354822 PRKD1Q15139 912 aaPredicted RBP23■■□□□ 1.27
NKX2-1-201ENST00000354822 TTC17Q96AE7 1141 aa23■■□□□ 1.27
NKX2-1-201ENST00000354822 FAM149B1Q96BN6 582 aa23■■□□□ 1.27
NKX2-1-201ENST00000354822 C12orf65Q9H3J6 166 aaKnown RBP23■■□□□ 1.27
NKX2-1-201ENST00000354822 TRIM33Q9UPN9 1127 aa23■■□□□ 1.27
NKX2-1-201ENST00000354822 MTO1Q9Y2Z2 717 aaKnown RBP23■■□□□ 1.27
NKX2-1-201ENST00000354822 PLLPQ9Y342 182 aa23■■□□□ 1.27
NKX2-1-201ENST00000354822 Q9Y3F1 56 aa23■■□□□ 1.27
NKX2-1-201ENST00000354822 SF3B1O75533 1304 aaKnown RBP eCLIP22.99■■□□□ 1.27
NKX2-1-201ENST00000354822 H3BRJ5 948 aa22.99■■□□□ 1.27
NKX2-1-201ENST00000354822 ZNF865P0CJ78 1059 aaPredicted RBP22.99■■□□□ 1.27
NKX2-1-201ENST00000354822 NPR3P17342 541 aa22.99■■□□□ 1.27
NKX2-1-201ENST00000354822 CNTFP26441 200 aa22.99■■□□□ 1.27
NKX2-1-201ENST00000354822 ADIGQ0VDE8 80 aa22.99■■□□□ 1.27
NKX2-1-201ENST00000354822 ANKRD20A2Q5SQ80 823 aa22.99■■□□□ 1.27
NKX2-1-201ENST00000354822 ANKRD20A1Q5TYW2 823 aa22.99■■□□□ 1.27
NKX2-1-201ENST00000354822 ANKRD20A3Q5VUR7 823 aa22.99■■□□□ 1.27
NKX2-1-201ENST00000354822 FAM131BQ86XD5 332 aa22.99■■□□□ 1.27
NKX2-1-201ENST00000354822 CCNJLQ8IV13 435 aa22.99■■□□□ 1.27
NKX2-1-201ENST00000354822 PTPRN2Q92932 1015 aa22.99■■□□□ 1.27
NKX2-1-201ENST00000354822 C17orf102A2RUQ5 167 aa22.99■■□□□ 1.27
NKX2-1-201ENST00000354822 TRAFD1O14545 582 aaPredicted RBP22.99■■□□□ 1.27
NKX2-1-201ENST00000354822 PTPN1P18031 435 aaKnown RBP22.99■■□□□ 1.27
NKX2-1-201ENST00000354822 CCNFP41002 786 aa22.99■■□□□ 1.27
NKX2-1-201ENST00000354822 DCAF6Q58WW2 860 aa22.99■■□□□ 1.27
NKX2-1-201ENST00000354822 OLFML2BQ68BL8 750 aa22.99■■□□□ 1.27
NKX2-1-201ENST00000354822 RASAL3Q86YV0 1011 aa22.99■■□□□ 1.27
NKX2-1-201ENST00000354822 SMG8Q8ND04 991 aaKnown RBP22.99■■□□□ 1.27
NKX2-1-201ENST00000354822 LRRN4Q8WUT4 740 aa22.99■■□□□ 1.27
NKX2-1-201ENST00000354822 MAGEB5Q9BZ81 275 aa22.99■■□□□ 1.27
NKX2-1-201ENST00000354822 AP5M1Q9H0R1 490 aa22.99■■□□□ 1.27
NKX2-1-201ENST00000354822 GOLGA2P5Q9HBQ8 144 aa22.99■■□□□ 1.27
NKX2-1-201ENST00000354822 LRRC4Q9HBW1 653 aa22.99■■□□□ 1.27
NKX2-1-201ENST00000354822 EIF2B3Q9NR50 452 aaKnown RBP22.99■■□□□ 1.27
NKX2-1-201ENST00000354822 FLRT1Q9NZU1 646 aa22.99■■□□□ 1.27
NKX2-1-201ENST00000354822 DOCK3Q8IZD9 2030 aa22.98■■□□□ 1.27
NKX2-1-201ENST00000354822 MANSC4A6NHS7 340 aaPredicted RBP22.98■■□□□ 1.27
NKX2-1-201ENST00000354822 OPHN1O60890 802 aa22.98■■□□□ 1.27
NKX2-1-201ENST00000354822 TKTP29401 623 aaKnown RBP22.98■■□□□ 1.27
NKX2-1-201ENST00000354822 TAF1CQ15572 869 aaPredicted RBP22.98■■□□□ 1.27
NKX2-1-201ENST00000354822 PLEKHG4Q58EX7 1191 aa22.98■■□□□ 1.27
NKX2-1-201ENST00000354822 BNIPLQ7Z465 357 aa22.98■■□□□ 1.27
NKX2-1-201ENST00000354822 OSTM1Q86WC4 334 aa22.98■■□□□ 1.27
NKX2-1-201ENST00000354822 NPY6RQ99463 290 aa22.98■■□□□ 1.27
NKX2-1-201ENST00000354822 ARHGEF4Q9NR80 690 aa22.98■■□□□ 1.27
NKX2-1-201ENST00000354822 HAO1Q9UJM8 370 aa22.98■■□□□ 1.27
NKX2-1-201ENST00000354822 CYB561D2O14569 222 aa22.97■■□□□ 1.27
NKX2-1-201ENST00000354822 RFPL1O75677 317 aa22.97■■□□□ 1.27
NKX2-1-201ENST00000354822 WFS1O76024 890 aa22.97■■□□□ 1.27
NKX2-1-201ENST00000354822 MYL3P08590 195 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms