RNA–Protein interactions for RNA: ENST00000353739.8

RNF38-203, Transcript of ring finger protein 38, humanhuman

TSL 1 (best) BASIC

Gene RNF38, Length 4,945 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-203ENST00000353739 WNT8BQ93098 351 aa3.85□□□□□ -1.79
RNF38-203ENST00000353739 TWNKQ96RR1 684 aa3.85□□□□□ -1.79
RNF38-203ENST00000353739 KCTD15Q96SI1 283 aaPredicted RBP3.85□□□□□ -1.79
RNF38-203ENST00000353739 EBNA1BP2Q99848 306 aaKnown RBP3.85□□□□□ -1.79
RNF38-203ENST00000353739 OXCT2Q9BYC2 517 aaPredicted RBP3.85□□□□□ -1.79
RNF38-203ENST00000353739 FAM49AQ9H0Q0 323 aaPredicted RBP3.85□□□□□ -1.79
RNF38-203ENST00000353739 YY1AP1Q9H869 796 aa3.85□□□□□ -1.79
RNF38-203ENST00000353739 SETD4Q9NVD3 440 aa3.85□□□□□ -1.79
RNF38-203ENST00000353739 COMMD8Q9NX08 183 aa3.85□□□□□ -1.79
RNF38-203ENST00000353739 NOP53Q9NZM5 478 aaKnown RBP3.85□□□□□ -1.79
RNF38-203ENST00000353739 HMGXB4Q9UGU5 601 aa3.85□□□□□ -1.79
RNF38-203ENST00000353739 GRID1Q9ULK0 1009 aa3.85□□□□□ -1.79
RNF38-203ENST00000353739 CHMP2BQ9UQN3 213 aa3.85□□□□□ -1.79
RNF38-203ENST00000353739 GNEQ9Y223 722 aaKnown RBP3.85□□□□□ -1.79
RNF38-203ENST00000353739 IPPQ9Y573 584 aa3.85□□□□□ -1.79
RNF38-203ENST00000353739 FAM159BA6NKW6 160 aa3.85□□□□□ -1.79
RNF38-203ENST00000353739 FGF10O15520 208 aaPredicted RBP3.85□□□□□ -1.79
RNF38-203ENST00000353739 DYNC1LI2O43237 492 aaPredicted RBP3.85□□□□□ -1.79
RNF38-203ENST00000353739 SPAG7O75391 227 aa3.85□□□□□ -1.79
RNF38-203ENST00000353739 CIB2O75838 187 aa3.85□□□□□ -1.79
RNF38-203ENST00000353739 HAUS5O94927 633 aa3.85□□□□□ -1.79
RNF38-203ENST00000353739 POLBP06746 335 aa3.85□□□□□ -1.79
RNF38-203ENST00000353739 ZSCAN5DPP0CG00 497 aa3.85□□□□□ -1.79
RNF38-203ENST00000353739 TCF4P15884 667 aa3.85□□□□□ -1.79
RNF38-203ENST00000353739 PTPN1P18031 435 aaKnown RBP3.85□□□□□ -1.79
RNF38-203ENST00000353739 CRHR1P34998 444 aa3.85□□□□□ -1.79
RNF38-203ENST00000353739 RPA3P35244 121 aaPredicted RBP3.85□□□□□ -1.79
RNF38-203ENST00000353739 SERPINB8P50452 374 aa3.85□□□□□ -1.79
RNF38-203ENST00000353739 ARFIP2P53365 341 aa3.85□□□□□ -1.79
RNF38-203ENST00000353739 NKX3-2P78367 333 aa3.85□□□□□ -1.79
RNF38-203ENST00000353739 DEUP1Q05D60 604 aa3.85□□□□□ -1.79
RNF38-203ENST00000353739 SOWAHAQ2M3V2 549 aa3.85□□□□□ -1.79
RNF38-203ENST00000353739 TIGD7Q6NT04 549 aaPredicted RBP3.85□□□□□ -1.79
RNF38-203ENST00000353739 RASSF3Q86WH2 238 aa3.85□□□□□ -1.79
RNF38-203ENST00000353739 TMEM192Q8IY95 271 aa3.85□□□□□ -1.79
RNF38-203ENST00000353739 PPP1R14CQ8TAE6 165 aa3.85□□□□□ -1.79
RNF38-203ENST00000353739 RDH11Q8TC12 318 aa3.85□□□□□ -1.79
RNF38-203ENST00000353739 PTCD2Q8WV60 388 aaKnown RBP3.85□□□□□ -1.79
RNF38-203ENST00000353739 BRI3BPQ8WY22 251 aa3.85□□□□□ -1.79
RNF38-203ENST00000353739 PEBP4Q96S96 227 aa3.85□□□□□ -1.79
RNF38-203ENST00000353739 FAM118BQ9BPY3 351 aa3.85□□□□□ -1.79
RNF38-203ENST00000353739 ARHGEF3Q9NR81 526 aa3.85□□□□□ -1.79
RNF38-203ENST00000353739 TUBGCP4Q9UGJ1 667 aa3.85□□□□□ -1.79
RNF38-203ENST00000353739 APOBEC2Q9Y235 224 aaKnown RBP3.85□□□□□ -1.79
RNF38-203ENST00000353739 TTLL3Q9Y4R7 772 aa3.85□□□□□ -1.79
RNF38-203ENST00000353739 SMIM28A0A1B0GU29 152 aa3.84□□□□□ -1.79
RNF38-203ENST00000353739 TMEM114B3SHH9 223 aa3.84□□□□□ -1.79
RNF38-203ENST00000353739 GOLGA8MH3BSY2 632 aa3.84□□□□□ -1.79
RNF38-203ENST00000353739 CYB561D2O14569 222 aa3.84□□□□□ -1.79
RNF38-203ENST00000353739 PAPSS1O43252 624 aaPredicted RBP3.84□□□□□ -1.79
RNF38-203ENST00000353739 CABYRO75952 493 aa3.84□□□□□ -1.79
RNF38-203ENST00000353739 CCDC130P13994 396 aa3.84□□□□□ -1.79
RNF38-203ENST00000353739 CALB2P22676 271 aa3.84□□□□□ -1.79
RNF38-203ENST00000353739 MAGEA3P43357 314 aa3.84□□□□□ -1.79
RNF38-203ENST00000353739 RGS7P49802 495 aa3.84□□□□□ -1.79
RNF38-203ENST00000353739 GDF10P55107 478 aa3.84□□□□□ -1.79
RNF38-203ENST00000353739 TPI1P60174 286 aa3.84□□□□□ -1.79
RNF38-203ENST00000353739 NCALDP61601 193 aa3.84□□□□□ -1.79
RNF38-203ENST00000353739 TSPY1Q01534 308 aa3.84□□□□□ -1.79
RNF38-203ENST00000353739 KIZQ2M2Z5 673 aa3.84□□□□□ -1.79
RNF38-203ENST00000353739 DNAL1Q4LDG9 190 aa3.84□□□□□ -1.79
RNF38-203ENST00000353739 ANKRD20A3Q5VUR7 823 aa3.84□□□□□ -1.79
RNF38-203ENST00000353739 PMF1Q6P1K2 205 aa3.84□□□□□ -1.79
RNF38-203ENST00000353739 DSTYKQ6XUX3 929 aa3.84□□□□□ -1.79
RNF38-203ENST00000353739 C4orf50Q6ZRC1 276 aa3.84□□□□□ -1.79
RNF38-203ENST00000353739 ZC3H18Q86VM9 953 aaKnown RBP3.84□□□□□ -1.79
RNF38-203ENST00000353739 REM2Q8IYK8 340 aaPredicted RBP3.84□□□□□ -1.79
RNF38-203ENST00000353739 PQLC3Q8N755 202 aa3.84□□□□□ -1.79
RNF38-203ENST00000353739 ACSF2Q96CM8 615 aaPredicted RBP3.84□□□□□ -1.79
RNF38-203ENST00000353739 OLFM3Q96PB7 478 aa3.84□□□□□ -1.79
RNF38-203ENST00000353739 CSPG4P5Q96PW8 444 aa3.84□□□□□ -1.79
RNF38-203ENST00000353739 UPF3AQ9H1J1 476 aaKnown RBP3.84□□□□□ -1.79
RNF38-203ENST00000353739 CATSPERBQ9H7T0 1116 aa3.84□□□□□ -1.79
RNF38-203ENST00000353739 LRRC40Q9H9A6 602 aa3.84□□□□□ -1.79
RNF38-203ENST00000353739 SDAD1Q9NVU7 687 aaKnown RBP eCLIP3.84□□□□□ -1.79
RNF38-203ENST00000353739 HEY1Q9Y5J3 304 aa3.84□□□□□ -1.79
RNF38-203ENST00000353739 C11orf97A0A1B0GVM6 126 aaPredicted RBP3.84□□□□□ -1.79
RNF38-203ENST00000353739 TCRBV9S1A1TA0A576 114 aa3.84□□□□□ -1.79
RNF38-203ENST00000353739 FAM170AA1A519 330 aa3.84□□□□□ -1.79
RNF38-203ENST00000353739 TRAFD1O14545 582 aaPredicted RBP3.84□□□□□ -1.79
RNF38-203ENST00000353739 ALDH1A2O94788 518 aa3.84□□□□□ -1.79
RNF38-203ENST00000353739 UBOX5O94941 541 aa3.84□□□□□ -1.79
RNF38-203ENST00000353739 GJB1P08034 283 aa3.84□□□□□ -1.79
RNF38-203ENST00000353739 DHRS4L1P0CG22 281 aa3.84□□□□□ -1.79
RNF38-203ENST00000353739 PAMP19021 973 aa3.84□□□□□ -1.79
RNF38-203ENST00000353739 GRK2P25098 689 aa3.84□□□□□ -1.79
RNF38-203ENST00000353739 RBL1P28749 1068 aa3.84□□□□□ -1.79
RNF38-203ENST00000353739 PTPN4P29074 926 aa3.84□□□□□ -1.79
RNF38-203ENST00000353739 HOXA11P31270 313 aaPredicted RBP3.84□□□□□ -1.79
RNF38-203ENST00000353739 CSE1LP55060 971 aaKnown RBP3.84□□□□□ -1.79
RNF38-203ENST00000353739 FSCN1Q16658 493 aaKnown RBP3.84□□□□□ -1.79
RNF38-203ENST00000353739 UGP2Q16851 508 aa3.84□□□□□ -1.79
RNF38-203ENST00000353739 PREPLQ4J6C6 727 aaPredicted RBP3.84□□□□□ -1.79
RNF38-203ENST00000353739 BRMS1LQ5PSV4 323 aa3.84□□□□□ -1.79
RNF38-203ENST00000353739 ANKRD20A2Q5SQ80 823 aa3.84□□□□□ -1.79
RNF38-203ENST00000353739 ANKRD20A1Q5TYW2 823 aa3.84□□□□□ -1.79
RNF38-203ENST00000353739 DAB2IPQ5VWQ8 1189 aa3.84□□□□□ -1.79
RNF38-203ENST00000353739 ANKRD22Q5VYY1 191 aa3.84□□□□□ -1.79
RNF38-203ENST00000353739 TWF2Q6IBS0 349 aaKnown RBP3.84□□□□□ -1.79
RNF38-203ENST00000353739 NLRP9Q7RTR0 991 aa3.84□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms