RNA–Protein interactions for RNA: ENST00000352818.8

CD44-205, Transcript of CD44 molecule (Indian blood group), humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD44, Length 1,023 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-205ENST00000352818 SLC32A1Q9H598 525 aa8.63□□□□□ -1.03
CD44-205ENST00000352818 CYP3A43Q9HB55 503 aa8.63□□□□□ -1.03
CD44-205ENST00000352818 MRPL47Q9HD33 250 aaKnown RBP8.63□□□□□ -1.03
CD44-205ENST00000352818 UTP3Q9NQZ2 479 aaKnown RBP eCLIP8.63□□□□□ -1.035e-38■■■■■ 698.7
CD44-205ENST00000352818 STK39Q9UEW8 545 aa8.63□□□□□ -1.03
CD44-205ENST00000352818 SIX4Q9UIU6 781 aa8.63□□□□□ -1.03
CD44-205ENST00000352818 FAN1Q9Y2M0 1017 aa8.63□□□□□ -1.03
CD44-205ENST00000352818 PRG3Q9Y2Y8 225 aaPredicted RBP8.63□□□□□ -1.03
CD44-205ENST00000352818 DERAQ9Y315 318 aa8.63□□□□□ -1.03
CD44-205ENST00000352818 PCDHA3Q9Y5H8 950 aa8.63□□□□□ -1.03
CD44-205ENST00000352818 ATG2BQ96BY7 2078 aa8.63□□□□□ -1.03
CD44-205ENST00000352818 CITO14578 2027 aa8.63□□□□□ -1.03
CD44-205ENST00000352818 COL5A1P20908 1838 aaPredicted RBP8.62□□□□□ -1.03
CD44-205ENST00000352818 A0A1B0GUA9 196 aa8.62□□□□□ -1.03
CD44-205ENST00000352818 FAM187AA6NFU0 413 aa8.62□□□□□ -1.03
CD44-205ENST00000352818 ADAM12O43184 909 aa8.62□□□□□ -1.03
CD44-205ENST00000352818 SART1O43290 800 aaKnown RBP8.62□□□□□ -1.03
CD44-205ENST00000352818 ATMINO43313 823 aaPredicted RBP8.62□□□□□ -1.03
CD44-205ENST00000352818 SPOPO43791 374 aa8.62□□□□□ -1.03
CD44-205ENST00000352818 ERLIN2O94905 339 aa8.62□□□□□ -1.03
CD44-205ENST00000352818 CST3P01034 146 aaPredicted RBP8.62□□□□□ -1.03
CD44-205ENST00000352818 FGGP02679 453 aa8.62□□□□□ -1.03
CD44-205ENST00000352818 ALDH2P05091 517 aa8.62□□□□□ -1.03
CD44-205ENST00000352818 CALB1P05937 261 aa8.62□□□□□ -1.03
CD44-205ENST00000352818 C8AP07357 584 aa8.62□□□□□ -1.03
CD44-205ENST00000352818 PAEPP09466 180 aa8.62□□□□□ -1.03
CD44-205ENST00000352818 HNRNPA1P09651 372 aaKnown RBP eCLIP8.62□□□□□ -1.03
CD44-205ENST00000352818 DARSP14868 501 aaKnown RBP8.62□□□□□ -1.03
CD44-205ENST00000352818 ARF4P18085 180 aaPredicted RBP8.62□□□□□ -1.03
CD44-205ENST00000352818 AXLP30530 894 aa8.62□□□□□ -1.03
CD44-205ENST00000352818 GDI1P31150 447 aa8.62□□□□□ -1.03
CD44-205ENST00000352818 GRM5P41594 1212 aa8.62□□□□□ -1.03
CD44-205ENST00000352818 TNNT3P45378 269 aaPredicted RBP8.62□□□□□ -1.03
CD44-205ENST00000352818 TFAMQ00059 246 aaKnown RBP8.62□□□□□ -1.03
CD44-205ENST00000352818 GUCY2DQ02846 1103 aa8.62□□□□□ -1.03
CD44-205ENST00000352818 LRRC32Q14392 662 aa8.62□□□□□ -1.03
CD44-205ENST00000352818 MESDQ14696 234 aa8.62□□□□□ -1.03
CD44-205ENST00000352818 CYP1B1Q16678 543 aa8.62□□□□□ -1.03
CD44-205ENST00000352818 TMEM132AQ24JP5 1023 aa8.62□□□□□ -1.03
CD44-205ENST00000352818 GLIPR1L2Q4G1C9 344 aa8.62□□□□□ -1.03
CD44-205ENST00000352818 SEZ6Q53EL9 994 aa8.62□□□□□ -1.03
CD44-205ENST00000352818 SEL1L2Q5TEA6 688 aa8.62□□□□□ -1.03
CD44-205ENST00000352818 CEP120Q8N960 986 aa8.62□□□□□ -1.03
CD44-205ENST00000352818 C1orf127Q8N9H9 656 aa8.62□□□□□ -1.03
CD44-205ENST00000352818 FAM181AQ8N9Y4 354 aa8.62□□□□□ -1.03
CD44-205ENST00000352818 CXorf38Q8TB03 319 aa8.62□□□□□ -1.03
CD44-205ENST00000352818 ZNF606Q8WXB4 792 aa8.62□□□□□ -1.03
CD44-205ENST00000352818 CYFIP2Q96F07 1278 aa8.62□□□□□ -1.03
CD44-205ENST00000352818 PKNOX2Q96KN3 472 aa8.62□□□□□ -1.03
CD44-205ENST00000352818 ZSWIM3Q96MP5 696 aa8.62□□□□□ -1.03
CD44-205ENST00000352818 TSPAN18Q96SJ8 248 aa8.62□□□□□ -1.03
CD44-205ENST00000352818 ADPGKQ9BRR6 497 aa8.62□□□□□ -1.03
CD44-205ENST00000352818 TMEM175Q9BSA9 504 aa8.62□□□□□ -1.03
CD44-205ENST00000352818 TRMT61BQ9BVS5 477 aaKnown RBP8.62□□□□□ -1.03
CD44-205ENST00000352818 GPR62Q9BZJ7 368 aa8.62□□□□□ -1.03
CD44-205ENST00000352818 PLEKHA5Q9HAU0 1116 aa8.62□□□□□ -1.03
CD44-205ENST00000352818 CISHQ9NSE2 258 aa8.62□□□□□ -1.03
CD44-205ENST00000352818 GDE1Q9NZC3 331 aa8.62□□□□□ -1.03
CD44-205ENST00000352818 FNIP2Q9P278 1114 aa8.62□□□□□ -1.03
CD44-205ENST00000352818 MBD1Q9UIS9 605 aaPredicted RBP8.62□□□□□ -1.03
CD44-205ENST00000352818 ITGA11Q9UKX5 1188 aa8.62□□□□□ -1.03
CD44-205ENST00000352818 SSX2IPQ9Y2D8 614 aa8.62□□□□□ -1.03
CD44-205ENST00000352818 EML5Q05BV3 1969 aa8.61□□□□□ -1.03
CD44-205ENST00000352818 TCRBV5S1A1TA0A578 114 aa8.61□□□□□ -1.03
CD44-205ENST00000352818 LACTBL1A8MY62 500 aa8.61□□□□□ -1.03
CD44-205ENST00000352818 H3BQF6 201 aa8.61□□□□□ -1.03
CD44-205ENST00000352818 THAP12O43422 761 aa8.61□□□□□ -1.03
CD44-205ENST00000352818 MED7O43513 233 aa8.61□□□□□ -1.03
CD44-205ENST00000352818 PSTPIP1O43586 416 aa8.61□□□□□ -1.03
CD44-205ENST00000352818 PHF2O75151 1096 aa8.61□□□□□ -1.03
CD44-205ENST00000352818 PROSCO94903 275 aa8.61□□□□□ -1.03
CD44-205ENST00000352818 NFICP08651 508 aa8.61□□□□□ -1.03
CD44-205ENST00000352818 POU2F2P09086 479 aa8.61□□□□□ -1.03
CD44-205ENST00000352818 MMP8P22894 467 aa8.61□□□□□ -1.03
CD44-205ENST00000352818 RRM1P23921 792 aa8.61□□□□□ -1.03
CD44-205ENST00000352818 OAS2P29728 719 aaKnown RBP8.61□□□□□ -1.03
CD44-205ENST00000352818 HOXA9P31269 272 aa8.61□□□□□ -1.03
CD44-205ENST00000352818 CHRNA3P32297 505 aa8.61□□□□□ -1.03
CD44-205ENST00000352818 GBP1P32455 592 aa8.61□□□□□ -1.03
CD44-205ENST00000352818 MAPK8P45983 427 aa8.61□□□□□ -1.03
CD44-205ENST00000352818 FNTAP49354 379 aa8.61□□□□□ -1.03
CD44-205ENST00000352818 DRG2P55039 364 aaKnown RBP8.61□□□□□ -1.03
CD44-205ENST00000352818 MLLT6P55198 1093 aaPredicted RBP8.61□□□□□ -1.03
CD44-205ENST00000352818 RWDD2BP57060 319 aa8.61□□□□□ -1.03
CD44-205ENST00000352818 SLC7A5Q01650 507 aa8.61□□□□□ -1.03
CD44-205ENST00000352818 CYP4F3Q08477 520 aa8.61□□□□□ -1.03
CD44-205ENST00000352818 TMEM132DQ14C87 1099 aa8.61□□□□□ -1.03
CD44-205ENST00000352818 SLC10A6Q3KNW5 377 aa8.61□□□□□ -1.03
CD44-205ENST00000352818 PABPC1LQ4VXU2 614 aaKnown RBP8.61□□□□□ -1.03
CD44-205ENST00000352818 ZNF667Q5HYK9 610 aa8.61□□□□□ -1.03
CD44-205ENST00000352818 ALS2CLQ60I27 953 aa8.61□□□□□ -1.03
CD44-205ENST00000352818 PRSS55Q6UWB4 352 aaPredicted RBP8.61□□□□□ -1.03
CD44-205ENST00000352818 SND1Q7KZF4 910 aaKnown RBP eCLIP8.61□□□□□ -1.03
CD44-205ENST00000352818 KLHL7Q8IXQ5 586 aa8.61□□□□□ -1.03
CD44-205ENST00000352818 GSPT2Q8IYD1 628 aaKnown RBP8.61□□□□□ -1.03
CD44-205ENST00000352818 COLGALT2Q8IYK4 626 aa8.61□□□□□ -1.03
CD44-205ENST00000352818 ABCA7Q8IZY2 2146 aa8.61□□□□□ -1.03
CD44-205ENST00000352818 TMEM35BQ8NCS4 154 aa8.61□□□□□ -1.03
CD44-205ENST00000352818 MAIP1Q8WWC4 291 aa8.61□□□□□ -1.03
CD44-205ENST00000352818 NLRP7Q8WX94 980 aa8.61□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms