RNA–Protein interactions for RNA: ENST00000352393.8

CPNE1-202, Transcript of copine 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPNE1, Length 2,147 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE1-202ENST00000352393 CLPTM1LQ96KA5 538 aa25.35■■□□□ 1.65
CPNE1-202ENST00000352393 FGD4Q96M96 766 aa25.35■■□□□ 1.65
CPNE1-202ENST00000352393 QKIQ96PU8 341 aaKnown RBP eCLIP25.35■■□□□ 1.656e-7■■■□□ 15.2
CPNE1-202ENST00000352393 EBF4Q9BQW3 602 aa25.35■■□□□ 1.65
CPNE1-202ENST00000352393 SIKE1Q9BRV8 207 aa25.35■■□□□ 1.65
CPNE1-202ENST00000352393 SPATS2LQ9NUQ6 558 aaKnown RBP25.35■■□□□ 1.65
CPNE1-202ENST00000352393 MOCS1Q9NZB8 636 aa25.35■■□□□ 1.65
CPNE1-202ENST00000352393 ITGA11Q9UKX5 1188 aa25.35■■□□□ 1.65
CPNE1-202ENST00000352393 C22orf31O95567 290 aa25.34■■□□□ 1.65
CPNE1-202ENST00000352393 ANPEPP15144 967 aa25.34■■□□□ 1.65
CPNE1-202ENST00000352393 PHKA2P46019 1235 aa25.34■■□□□ 1.65
CPNE1-202ENST00000352393 SLC6A3Q01959 620 aa25.34■■□□□ 1.65
CPNE1-202ENST00000352393 GBE1Q04446 702 aa25.34■■□□□ 1.65
CPNE1-202ENST00000352393 SEMA5AQ13591 1074 aa25.34■■□□□ 1.65
CPNE1-202ENST00000352393 PPP6R3Q5H9R7 873 aaPredicted RBP25.34■■□□□ 1.65
CPNE1-202ENST00000352393 STXBP5Q5T5C0 1151 aa25.34■■□□□ 1.65
CPNE1-202ENST00000352393 STEAP4Q687X5 459 aa25.34■■□□□ 1.65
CPNE1-202ENST00000352393 DDX55Q8NHQ9 600 aaKnown RBP eCLIP25.34■■□□□ 1.652e-6■□□□□ 10.3
CPNE1-202ENST00000352393 GATA6Q92908 595 aa25.34■■□□□ 1.65
CPNE1-202ENST00000352393 SPATA33Q96N06 139 aa25.34■■□□□ 1.65
CPNE1-202ENST00000352393 SLC4A5Q9BY07 1137 aa25.34■■□□□ 1.65
CPNE1-202ENST00000352393 DNAJB4Q9UDY4 337 aa25.34■■□□□ 1.65
CPNE1-202ENST00000352393 KIF3CO14782 793 aa25.34■■□□□ 1.65
CPNE1-202ENST00000352393 HBP1O60381 514 aa25.34■■□□□ 1.65
CPNE1-202ENST00000352393 AOC1P19801 751 aa25.34■■□□□ 1.65
CPNE1-202ENST00000352393 BAG6P46379 1132 aa25.34■■□□□ 1.65
CPNE1-202ENST00000352393 SLC10A2Q12908 348 aaPredicted RBP25.34■■□□□ 1.65
CPNE1-202ENST00000352393 TUBB3Q13509 450 aa25.34■■□□□ 1.65
CPNE1-202ENST00000352393 UBAP2LQ14157 1087 aaKnown RBP25.34■■□□□ 1.65
CPNE1-202ENST00000352393 DALRD3Q5D0E6 543 aaKnown RBP25.34■■□□□ 1.65
CPNE1-202ENST00000352393 C6orf163Q5TEZ5 329 aa25.34■■□□□ 1.65
CPNE1-202ENST00000352393 CYS1Q717R9 158 aa25.34■■□□□ 1.65
CPNE1-202ENST00000352393 TTC30AQ86WT1 665 aa25.34■■□□□ 1.65
CPNE1-202ENST00000352393 ZNF778Q96MU6 729 aa25.34■■□□□ 1.65
CPNE1-202ENST00000352393 THTPAQ9BU02 230 aa25.34■■□□□ 1.65
CPNE1-202ENST00000352393 GPAMQ9HCL2 828 aa25.34■■□□□ 1.65
CPNE1-202ENST00000352393 DDX43Q9NXZ2 648 aaKnown RBP25.34■■□□□ 1.65
CPNE1-202ENST00000352393 SORCS3Q9UPU3 1222 aa25.34■■□□□ 1.65
CPNE1-202ENST00000352393 CITO14578 2027 aa25.34■■□□□ 1.65
CPNE1-202ENST00000352393 GRIA1P42261 906 aa25.33■■□□□ 1.65
CPNE1-202ENST00000352393 DPYSL2Q16555 572 aa25.33■■□□□ 1.65
CPNE1-202ENST00000352393 NBPF20Q3BBV1 942 aa25.33■■□□□ 1.65
CPNE1-202ENST00000352393 MBLAC2Q68D91 279 aa25.33■■□□□ 1.65
CPNE1-202ENST00000352393 MARK2Q7KZI7 788 aaKnown RBP25.33■■□□□ 1.65
CPNE1-202ENST00000352393 RILPQ96NA2 401 aa25.33■■□□□ 1.65
CPNE1-202ENST00000352393 SMARCAD1Q9H4L7 1026 aa25.33■■□□□ 1.65
CPNE1-202ENST00000352393 EMCNQ9ULC0 261 aa25.33■■□□□ 1.65
CPNE1-202ENST00000352393 MCM3APO60318 1980 aa25.33■■□□□ 1.65
CPNE1-202ENST00000352393 CSDE1O75534 798 aaKnown RBP25.33■■□□□ 1.64
CPNE1-202ENST00000352393 TOMM70O94826 608 aa25.33■■□□□ 1.64
CPNE1-202ENST00000352393 CPOXP36551 454 aa25.33■■□□□ 1.64
CPNE1-202ENST00000352393 RBP5P82980 135 aa25.33■■□□□ 1.64
CPNE1-202ENST00000352393 GSTA3Q16772 222 aa25.33■■□□□ 1.64
CPNE1-202ENST00000352393 FASTKD1Q53R41 847 aaKnown RBP25.33■■□□□ 1.64
CPNE1-202ENST00000352393 PPP1R26Q5T8A7 1209 aaPredicted RBP25.33■■□□□ 1.64
CPNE1-202ENST00000352393 TMEM110Q86TL2 294 aa25.33■■□□□ 1.64
CPNE1-202ENST00000352393 TSC22D3Q99576 134 aa25.33■■□□□ 1.64
CPNE1-202ENST00000352393 GCOM2Q9BZD3 368 aaPredicted RBP25.33■■□□□ 1.64
CPNE1-202ENST00000352393 R3HDMLQ9H3Y0 253 aa25.33■■□□□ 1.64
CPNE1-202ENST00000352393 EME2A4GXA9 379 aaPredicted RBP25.32■■□□□ 1.64
CPNE1-202ENST00000352393 PAPSS1O43252 624 aaPredicted RBP25.32■■□□□ 1.64
CPNE1-202ENST00000352393 ALDH1A2O94788 518 aa25.32■■□□□ 1.64
CPNE1-202ENST00000352393 SETSIPP0DME0 302 aa25.32■■□□□ 1.64
CPNE1-202ENST00000352393 L1CAMP32004 1257 aa25.32■■□□□ 1.64
CPNE1-202ENST00000352393 POU5F1BQ06416 359 aa25.32■■□□□ 1.64
CPNE1-202ENST00000352393 RABGAP1LQ5R372 815 aa25.32■■□□□ 1.64
CPNE1-202ENST00000352393 EP400NLQ6ZTU2 488 aa25.32■■□□□ 1.64
CPNE1-202ENST00000352393 SESTD1Q86VW0 696 aa25.32■■□□□ 1.64
CPNE1-202ENST00000352393 IFNLR1Q8IU57 520 aaPredicted RBP25.32■■□□□ 1.64
CPNE1-202ENST00000352393 ACMSDQ8TDX5 336 aa25.32■■□□□ 1.64
CPNE1-202ENST00000352393 CPB2Q96IY4 423 aa25.32■■□□□ 1.64
CPNE1-202ENST00000352393 DPP3Q9NY33 737 aa25.32■■□□□ 1.64
CPNE1-202ENST00000352393 C2CD2Q9Y426 696 aa25.32■■□□□ 1.64
CPNE1-202ENST00000352393 MAGEA13PA6NCF6 341 aa25.31■■□□□ 1.64
CPNE1-202ENST00000352393 GABBR2O75899 941 aa25.31■■□□□ 1.64
CPNE1-202ENST00000352393 TFE3P19532 575 aaPredicted RBP25.31■■□□□ 1.64
CPNE1-202ENST00000352393 NIPAL4Q0D2K0 466 aa25.31■■□□□ 1.64
CPNE1-202ENST00000352393 TEDDM1Q5T9Z0 273 aa25.31■■□□□ 1.64
CPNE1-202ENST00000352393 SPDYE1Q8NFV5 336 aaPredicted RBP25.31■■□□□ 1.64
CPNE1-202ENST00000352393 STN1Q9H668 368 aaKnown RBP25.31■■□□□ 1.64
CPNE1-202ENST00000352393 HESX1Q9UBX0 185 aa25.31■■□□□ 1.64
CPNE1-202ENST00000352393 FGF3P11487 239 aaPredicted RBP25.31■■□□□ 1.64
CPNE1-202ENST00000352393 ADORA2AP29274 412 aa25.31■■□□□ 1.64
CPNE1-202ENST00000352393 NR2C2P49116 596 aa25.31■■□□□ 1.64
CPNE1-202ENST00000352393 AP2B1P63010 937 aa25.31■■□□□ 1.64
CPNE1-202ENST00000352393 KCNT2Q6UVM3 1135 aa25.31■■□□□ 1.64
CPNE1-202ENST00000352393 DEFB132Q7Z7B7 95 aa25.31■■□□□ 1.64
CPNE1-202ENST00000352393 C11orf84Q9BUA3 381 aaPredicted RBP25.31■■□□□ 1.64
CPNE1-202ENST00000352393 NDE1Q9NXR1 346 aa25.31■■□□□ 1.64
CPNE1-202ENST00000352393 SOX13Q9UN79 622 aa25.31■■□□□ 1.64
CPNE1-202ENST00000352393 PAPPA2Q9BXP8 1791 aa25.3■■□□□ 1.64
CPNE1-202ENST00000352393 ZFXP17010 805 aaPredicted RBP25.3■■□□□ 1.64
CPNE1-202ENST00000352393 DESP17661 470 aa25.3■■□□□ 1.64
CPNE1-202ENST00000352393 PTPN9P43378 593 aa25.3■■□□□ 1.64
CPNE1-202ENST00000352393 TMCO4Q5TGY1 634 aa25.3■■□□□ 1.64
CPNE1-202ENST00000352393 C1orf146Q5VVC0 180 aa25.3■■□□□ 1.64
CPNE1-202ENST00000352393 PHC3Q8NDX5 983 aa25.3■■□□□ 1.64
CPNE1-202ENST00000352393 PIWIL2Q8TC59 973 aaKnown RBP25.3■■□□□ 1.64
CPNE1-202ENST00000352393 TRPM4Q8TD43 1214 aa25.3■■□□□ 1.64
CPNE1-202ENST00000352393 COPS5Q92905 334 aa25.3■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms