RNA–Protein interactions for RNA: ENST00000351948.8

SMC6-201, Transcript of structural maintenance of chromosomes 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC6, Length 5,173 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC6-201ENST00000351948 PECAM1P16284 738 aaPredicted RBP14.11□□□□□ -0.15
SMC6-201ENST00000351948 SSTR1P30872 391 aa14.11□□□□□ -0.15
SMC6-201ENST00000351948 FAM153CQ494X1 144 aa14.11□□□□□ -0.15
SMC6-201ENST00000351948 TMCO4Q5TGY1 634 aa14.11□□□□□ -0.15
SMC6-201ENST00000351948 SLC24A5Q71RS6 500 aa14.11□□□□□ -0.15
SMC6-201ENST00000351948 SPATA21Q7Z572 469 aa14.11□□□□□ -0.15
SMC6-201ENST00000351948 FAM35AQ86V20 835 aa14.11□□□□□ -0.15
SMC6-201ENST00000351948 FAM153AQ9UHL3 310 aa14.11□□□□□ -0.15
SMC6-201ENST00000351948 L3MBTL1Q9Y468 752 aa14.11□□□□□ -0.15
SMC6-201ENST00000351948 CDY1Q9Y6F8 540 aa14.11□□□□□ -0.15
SMC6-201ENST00000351948 NID2Q14112 1375 aa14.11□□□□□ -0.15
SMC6-201ENST00000351948 MYH2Q9UKX2 1941 aa14.11□□□□□ -0.15
SMC6-201ENST00000351948 PJA2O43164 708 aa14.11□□□□□ -0.15
SMC6-201ENST00000351948 BUD23O43709 281 aaKnown RBP14.11□□□□□ -0.15
SMC6-201ENST00000351948 TOMM70O94826 608 aa14.11□□□□□ -0.15
SMC6-201ENST00000351948 TRIM16O95361 564 aa14.11□□□□□ -0.15
SMC6-201ENST00000351948 RARGP13631 454 aa14.11□□□□□ -0.15
SMC6-201ENST00000351948 PTPN7P35236 360 aa14.11□□□□□ -0.15
SMC6-201ENST00000351948 ELK3P41970 407 aa14.11□□□□□ -0.15
SMC6-201ENST00000351948 PTK6Q13882 451 aa14.11□□□□□ -0.15
SMC6-201ENST00000351948 PLPP4Q5VZY2 271 aa14.11□□□□□ -0.15
SMC6-201ENST00000351948 OLFML2BQ68BL8 750 aa14.11□□□□□ -0.15
SMC6-201ENST00000351948 DCLRE1AQ6PJP8 1040 aa14.11□□□□□ -0.15
SMC6-201ENST00000351948 CREG2Q8IUH2 290 aa14.11□□□□□ -0.15
SMC6-201ENST00000351948 DENND1CQ8IV53 801 aa14.11□□□□□ -0.15
SMC6-201ENST00000351948 RSPH1Q8WYR4 309 aa14.11□□□□□ -0.15
SMC6-201ENST00000351948 UBXN6Q9BZV1 441 aa14.11□□□□□ -0.15
SMC6-201ENST00000351948 ANKZF1Q9H8Y5 726 aa14.11□□□□□ -0.15
SMC6-201ENST00000351948 VIPAS39Q9H9C1 493 aa14.11□□□□□ -0.15
SMC6-201ENST00000351948 ABCC13Q9NSE7 274 aa14.11□□□□□ -0.15
SMC6-201ENST00000351948 ZWINTO95229 277 aa14.11□□□□□ -0.15
SMC6-201ENST00000351948 CHI3L2Q15782 390 aa14.11□□□□□ -0.15
SMC6-201ENST00000351948 STRA8Q7Z7C7 330 aa14.11□□□□□ -0.15
SMC6-201ENST00000351948 COL1A2P08123 1366 aa14.11□□□□□ -0.15
SMC6-201ENST00000351948 M0R2N6 131 aa14.1□□□□□ -0.15
SMC6-201ENST00000351948 DHX15O43143 795 aaKnown RBP14.1□□□□□ -0.15
SMC6-201ENST00000351948 PIAS1O75925 651 aa14.1□□□□□ -0.15
SMC6-201ENST00000351948 ADSSP30520 456 aa14.1□□□□□ -0.15
SMC6-201ENST00000351948 ABCG1P45844 678 aa14.1□□□□□ -0.15
SMC6-201ENST00000351948 TARBP2Q15633 366 aaKnown RBP14.1□□□□□ -0.15
SMC6-201ENST00000351948 USP6NLQ92738 828 aa14.1□□□□□ -0.15
SMC6-201ENST00000351948 XPO6Q96QU8 1125 aaKnown RBP14.1□□□□□ -0.15
SMC6-201ENST00000351948 TRIM33Q9UPN9 1127 aa14.1□□□□□ -0.15
SMC6-201ENST00000351948 SHOC2Q9UQ13 582 aa14.1□□□□□ -0.15
SMC6-201ENST00000351948 NAALADL1Q9UQQ1 740 aa14.1□□□□□ -0.15
SMC6-201ENST00000351948 BAZ2AQ9UIF9 1905 aaKnown RBP14.1□□□□□ -0.15
SMC6-201ENST00000351948 XYLBO75191 536 aa14.1□□□□□ -0.15
SMC6-201ENST00000351948 ENO1P06733 434 aaKnown RBP14.1□□□□□ -0.15
SMC6-201ENST00000351948 ATXN3P54252 364 aaPredicted RBP14.1□□□□□ -0.15
SMC6-201ENST00000351948 CRADDP78560 199 aa14.1□□□□□ -0.15
SMC6-201ENST00000351948 SNX31Q8N9S9 440 aa14.1□□□□□ -0.15
SMC6-201ENST00000351948 PAFAH2Q99487 392 aa14.1□□□□□ -0.15
SMC6-201ENST00000351948 LRRC40Q9H9A6 602 aa14.1□□□□□ -0.15
SMC6-201ENST00000351948 ZMYND8Q9ULU4 1186 aaPredicted RBP14.1□□□□□ -0.15
SMC6-201ENST00000351948 CASQ2O14958 399 aaPredicted RBP14.1□□□□□ -0.15
SMC6-201ENST00000351948 MDM4O15151 490 aa14.1□□□□□ -0.15
SMC6-201ENST00000351948 MSI1O43347 362 aaKnown RBP14.1□□□□□ -0.15
SMC6-201ENST00000351948 B4GALT4O60513 344 aa14.1□□□□□ -0.15
SMC6-201ENST00000351948 SERPINF2P08697 491 aa14.1□□□□□ -0.15
SMC6-201ENST00000351948 MGAT1P26572 445 aa14.1□□□□□ -0.15
SMC6-201ENST00000351948 CCND3P30281 292 aaPredicted RBP14.1□□□□□ -0.15
SMC6-201ENST00000351948 GRAMD1BQ3KR37 738 aa14.1□□□□□ -0.15
SMC6-201ENST00000351948 C6orf10Q5SRN2 563 aa14.1□□□□□ -0.15
SMC6-201ENST00000351948 MRNIPQ6NTE8 343 aa14.1□□□□□ -0.15
SMC6-201ENST00000351948 ANKRD7Q92527 254 aa14.1□□□□□ -0.15
SMC6-201ENST00000351948 WHRNQ9P202 907 aa14.1□□□□□ -0.15
SMC6-201ENST00000351948 WDR27A2RRH5 827 aa14.1□□□□□ -0.15
SMC6-201ENST00000351948 RGS4P49798 205 aa14.1□□□□□ -0.15
SMC6-201ENST00000351948 KPNA1P52294 538 aaPredicted RBP14.1□□□□□ -0.15
SMC6-201ENST00000351948 DDX39BQ13838 428 aaKnown RBP14.1□□□□□ -0.15
SMC6-201ENST00000351948 PCBP1Q15365 356 aaKnown RBP eCLIP14.1□□□□□ -0.15
SMC6-201ENST00000351948 PTPN20Q4JDL3 420 aa14.1□□□□□ -0.15
SMC6-201ENST00000351948 RETSATQ6NUM9 610 aa14.1□□□□□ -0.15
SMC6-201ENST00000351948 C4orf22Q6V702 233 aa14.1□□□□□ -0.15
SMC6-201ENST00000351948 ANKS3Q6ZW76 656 aa14.1□□□□□ -0.15
SMC6-201ENST00000351948 LRRC52Q8N7C0 313 aa14.1□□□□□ -0.15
SMC6-201ENST00000351948 CCT8L2Q96SF2 557 aa14.1□□□□□ -0.15
SMC6-201ENST00000351948 CPXM1Q96SM3 734 aa14.1□□□□□ -0.15
SMC6-201ENST00000351948 SEC23IPQ9Y6Y8 1000 aaKnown RBP14.1□□□□□ -0.15
SMC6-201ENST00000351948 DDHD2O94830 711 aa14.09□□□□□ -0.15
SMC6-201ENST00000351948 C4BPAP04003 597 aaKnown RBP14.09□□□□□ -0.15
SMC6-201ENST00000351948 GOT1P17174 413 aa14.09□□□□□ -0.15
SMC6-201ENST00000351948 RPL17P18621 184 aaKnown RBP14.09□□□□□ -0.15
SMC6-201ENST00000351948 RPL9P32969 192 aaKnown RBP14.09□□□□□ -0.15
SMC6-201ENST00000351948 CYP2C18P33260 490 aa14.09□□□□□ -0.15
SMC6-201ENST00000351948 PPP3CCP48454 512 aa14.09□□□□□ -0.15
SMC6-201ENST00000351948 ZNF143P52747 638 aaPredicted RBP14.09□□□□□ -0.15
SMC6-201ENST00000351948 ACLYP53396 1101 aa14.09□□□□□ -0.15
SMC6-201ENST00000351948 TAS2R40P59535 323 aa14.09□□□□□ -0.15
SMC6-201ENST00000351948 CUL3Q13618 768 aa14.09□□□□□ -0.15
SMC6-201ENST00000351948 CCDC157Q569K6 752 aa14.09□□□□□ -0.15
SMC6-201ENST00000351948 FAM161BQ96MY7 647 aa14.09□□□□□ -0.15
SMC6-201ENST00000351948 MINDY3Q9H8M7 445 aa14.09□□□□□ -0.15
SMC6-201ENST00000351948 PCDH9Q9HC56 1237 aa14.09□□□□□ -0.15
SMC6-201ENST00000351948 PCDHGC5Q9Y5F6 944 aa14.09□□□□□ -0.15
SMC6-201ENST00000351948 SMAPO00193 183 aa14.09□□□□□ -0.15
SMC6-201ENST00000351948 PCDH8O95206 1070 aa14.09□□□□□ -0.15
SMC6-201ENST00000351948 CXCL14O95715 111 aa14.09□□□□□ -0.15
SMC6-201ENST00000351948 LAMB3Q13751 1172 aa14.09□□□□□ -0.15
SMC6-201ENST00000351948 EFTUD2Q15029 972 aaKnown RBP eCLIP14.09□□□□□ -0.152e-6■■■□□ 18.3
Retrieved 100 of 20,778 RNA–protein pairs in 57.7 ms