RNA–Protein interactions for RNA: ENST00000351487.5

UPF3A-201, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

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Gene UPF3A, Length 2,235 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-201ENST00000351487 MAGEB5Q9BZ81 275 aa22.89■■□□□ 1.25
UPF3A-201ENST00000351487 SNX25Q9H3E2 840 aa22.89■■□□□ 1.25
UPF3A-201ENST00000351487 MTO1Q9Y2Z2 717 aaKnown RBP22.89■■□□□ 1.25
UPF3A-201ENST00000351487 CYP2C9P11712 490 aa22.88■■□□□ 1.25
UPF3A-201ENST00000351487 TAF6P49848 677 aa22.88■■□□□ 1.25
UPF3A-201ENST00000351487 SKA1Q96BD8 255 aa22.88■■□□□ 1.25
UPF3A-201ENST00000351487 APOL6Q9BWW8 343 aa22.88■■□□□ 1.25
UPF3A-201ENST00000351487 PCDHA11Q9Y5I1 949 aa22.88■■□□□ 1.25
UPF3A-201ENST00000351487 SCN4AP35499 1836 aa22.88■■□□□ 1.25
UPF3A-201ENST00000351487 A0A0G2JND7 137 aa22.88■■□□□ 1.25
UPF3A-201ENST00000351487 XPO1O14980 1071 aaKnown RBP22.88■■□□□ 1.25
UPF3A-201ENST00000351487 PTPN4P29074 926 aa22.88■■□□□ 1.25
UPF3A-201ENST00000351487 ARFIP2P53365 341 aa22.88■■□□□ 1.25
UPF3A-201ENST00000351487 MRPS5P82675 430 aaKnown RBP22.88■■□□□ 1.25
UPF3A-201ENST00000351487 ACCSLQ4AC99 568 aa22.88■■□□□ 1.25
UPF3A-201ENST00000351487 TLDC1Q6P9B6 456 aa22.88■■□□□ 1.25
UPF3A-201ENST00000351487 TRIM42Q8IWZ5 723 aa22.88■■□□□ 1.25
UPF3A-201ENST00000351487 APPL2Q8NEU8 664 aa22.88■■□□□ 1.25
UPF3A-201ENST00000351487 TFB1MQ8WVM0 346 aaKnown RBP22.88■■□□□ 1.25
UPF3A-201ENST00000351487 RNF19AQ9NV58 838 aa22.88■■□□□ 1.25
UPF3A-201ENST00000351487 FZD10Q9ULW2 581 aa22.88■■□□□ 1.25
UPF3A-201ENST00000351487 C15orf41Q9Y2V0 281 aa22.88■■□□□ 1.25
UPF3A-201ENST00000351487 A0A0A0MRY4 1105 aa22.87■■□□□ 1.25
UPF3A-201ENST00000351487 ANP32DO95626 131 aa22.87■■□□□ 1.25
UPF3A-201ENST00000351487 ARL4AP40617 200 aa22.87■■□□□ 1.25
UPF3A-201ENST00000351487 SERPINB9P50453 376 aa22.87■■□□□ 1.25
UPF3A-201ENST00000351487 CDK16Q00536 496 aa22.87■■□□□ 1.25
UPF3A-201ENST00000351487 SLC25A52Q3SY17 297 aa22.87■■□□□ 1.25
UPF3A-201ENST00000351487 SV2CQ496J9 727 aa22.87■■□□□ 1.25
UPF3A-201ENST00000351487 ZNF618Q5T7W0 954 aa22.87■■□□□ 1.25
UPF3A-201ENST00000351487 TRMT10BQ6PF06 316 aaKnown RBP22.87■■□□□ 1.25
UPF3A-201ENST00000351487 HACE1Q8IYU2 909 aa22.87■■□□□ 1.25
UPF3A-201ENST00000351487 MPP5Q8N3R9 675 aa22.87■■□□□ 1.25
UPF3A-201ENST00000351487 NPLOC4Q8TAT6 608 aa22.87■■□□□ 1.25
UPF3A-201ENST00000351487 HTR3CQ8WXA8 447 aa22.87■■□□□ 1.25
UPF3A-201ENST00000351487 TNIP3Q96KP6 325 aa22.87■■□□□ 1.25
UPF3A-201ENST00000351487 SPATA13Q96N96 652 aa22.87■■□□□ 1.25
UPF3A-201ENST00000351487 RPL26L1Q9UNX3 145 aaKnown RBP22.87■■□□□ 1.25
UPF3A-201ENST00000351487 PIN4Q9Y237 131 aaKnown RBP22.87■■□□□ 1.25
UPF3A-201ENST00000351487 MAD1L1Q9Y6D9 718 aa22.87■■□□□ 1.25
UPF3A-201ENST00000351487 UGT1A9O60656 530 aa22.86■■□□□ 1.25
UPF3A-201ENST00000351487 MLNP12872 115 aa22.86■■□□□ 1.25
UPF3A-201ENST00000351487 VAV1P15498 845 aa22.86■■□□□ 1.25
UPF3A-201ENST00000351487 GOT1P17174 413 aa22.86■■□□□ 1.25
UPF3A-201ENST00000351487 AMPD1P23109 780 aa22.86■■□□□ 1.25
UPF3A-201ENST00000351487 TKTP29401 623 aaKnown RBP22.86■■□□□ 1.25
UPF3A-201ENST00000351487 FDFT1P37268 417 aa22.86■■□□□ 1.25
UPF3A-201ENST00000351487 ADAM17P78536 824 aa22.86■■□□□ 1.25
UPF3A-201ENST00000351487 SNX17Q15036 470 aa22.86■■□□□ 1.25
UPF3A-201ENST00000351487 STEAP4Q687X5 459 aa22.86■■□□□ 1.25
UPF3A-201ENST00000351487 BZW1Q7L1Q6 419 aaKnown RBP22.86■■□□□ 1.25
UPF3A-201ENST00000351487 PLEKHH3Q7Z736 793 aa22.86■■□□□ 1.25
UPF3A-201ENST00000351487 TMEM40Q8WWA1 233 aa22.86■■□□□ 1.25
UPF3A-201ENST00000351487 TMEM120AQ9BXJ8 343 aa22.86■■□□□ 1.25
UPF3A-201ENST00000351487 UGT1A7Q9HAW7 530 aa22.86■■□□□ 1.25
UPF3A-201ENST00000351487 UGT1A10Q9HAW8 530 aa22.86■■□□□ 1.25
UPF3A-201ENST00000351487 UGT1A8Q9HAW9 530 aa22.86■■□□□ 1.25
UPF3A-201ENST00000351487 MOCS1Q9NZB8 636 aa22.86■■□□□ 1.25
UPF3A-201ENST00000351487 HEY2Q9UBP5 337 aa22.86■■□□□ 1.25
UPF3A-201ENST00000351487 TSC2P49815 1807 aa22.86■■□□□ 1.25
UPF3A-201ENST00000351487 DAB1O75553 588 aa22.86■■□□□ 1.25
UPF3A-201ENST00000351487 HAUS5O94927 633 aa22.86■■□□□ 1.25
UPF3A-201ENST00000351487 NEFHP12036 1026 aa22.86■■□□□ 1.25
UPF3A-201ENST00000351487 SARNPP82979 210 aaKnown RBP22.86■■□□□ 1.25
UPF3A-201ENST00000351487 BNIPLQ7Z465 357 aa22.86■■□□□ 1.25
UPF3A-201ENST00000351487 ADGRF2Q8IZF7 708 aa22.86■■□□□ 1.25
UPF3A-201ENST00000351487 FAM13CQ8NE31 585 aa22.86■■□□□ 1.25
UPF3A-201ENST00000351487 C7orf26Q96N11 449 aa22.86■■□□□ 1.25
UPF3A-201ENST00000351487 TUBB6Q9BUF5 446 aa22.86■■□□□ 1.25
UPF3A-201ENST00000351487 ZNF638Q14966 1978 aaKnown RBP22.86■■□□□ 1.25
UPF3A-201ENST00000351487 SF3B1O75533 1304 aaKnown RBP eCLIP22.86■■□□□ 1.25
UPF3A-201ENST00000351487 TRIP12Q14669 1992 aaPredicted RBP22.85■■□□□ 1.25
UPF3A-201ENST00000351487 HMX2A2RU54 273 aa22.85■■□□□ 1.25
UPF3A-201ENST00000351487 SOX4Q06945 474 aaPredicted RBP22.85■■□□□ 1.25
UPF3A-201ENST00000351487 FAM110CQ1W6H9 321 aa22.85■■□□□ 1.25
UPF3A-201ENST00000351487 ANKRD20A2Q5SQ80 823 aa22.85■■□□□ 1.25
UPF3A-201ENST00000351487 UBXN11Q5T124 520 aa22.85■■□□□ 1.25
UPF3A-201ENST00000351487 ANKRD20A1Q5TYW2 823 aa22.85■■□□□ 1.25
UPF3A-201ENST00000351487 ANKRD20A3Q5VUR7 823 aa22.85■■□□□ 1.25
UPF3A-201ENST00000351487 PIGZQ86VD9 579 aa22.85■■□□□ 1.25
UPF3A-201ENST00000351487 PYROXD2Q8N2H3 581 aa22.85■■□□□ 1.25
UPF3A-201ENST00000351487 OXNAD1Q96HP4 312 aaPredicted RBP22.85■■□□□ 1.25
UPF3A-201ENST00000351487 HNRNPABQ99729 332 aaKnown RBP22.85■■□□□ 1.25
UPF3A-201ENST00000351487 TRIM56Q9BRZ2 755 aaKnown RBP22.85■■□□□ 1.25
UPF3A-201ENST00000351487 EIF2B3Q9NR50 452 aaKnown RBP22.85■■□□□ 1.25
UPF3A-201ENST00000351487 ARHGEF4Q9NR80 690 aa22.85■■□□□ 1.25
UPF3A-201ENST00000351487 KLK14Q9P0G3 267 aa22.85■■□□□ 1.25
UPF3A-201ENST00000351487 SIRPGQ9P1W8 387 aa22.85■■□□□ 1.25
UPF3A-201ENST00000351487 GNEQ9Y223 722 aaKnown RBP22.85■■□□□ 1.25
UPF3A-201ENST00000351487 MFHAS1Q9Y4C4 1052 aa22.85■■□□□ 1.25
UPF3A-201ENST00000351487 MYO18AQ92614 2054 aaKnown RBP22.85■■□□□ 1.25
UPF3A-201ENST00000351487 DYNC1LI2O43237 492 aaPredicted RBP22.85■■□□□ 1.25
UPF3A-201ENST00000351487 WARSP23381 471 aaKnown RBP22.85■■□□□ 1.25
UPF3A-201ENST00000351487 CNTFP26441 200 aa22.85■■□□□ 1.25
UPF3A-201ENST00000351487 GRIA1P42261 906 aa22.85■■□□□ 1.25
UPF3A-201ENST00000351487 SULT1E1P49888 294 aa22.85■■□□□ 1.25
UPF3A-201ENST00000351487 BMPR2Q13873 1038 aa22.85■■□□□ 1.25
UPF3A-201ENST00000351487 NBPF20Q3BBV1 942 aa22.85■■□□□ 1.25
UPF3A-201ENST00000351487 OTUD1Q5VV17 481 aaPredicted RBP22.85■■□□□ 1.25
UPF3A-201ENST00000351487 TIFABQ6ZNK6 161 aa22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms