RNA–Protein interactions for RNA: ENST00000349379.5

SNX3-202, Transcript of sorting nexin 3, humanhuman

TSL 2 BASIC

Gene SNX3, Length 890 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX3-202ENST00000349379 ANO4Q32M45 955 aa23.03■■□□□ 1.28
SNX3-202ENST00000349379 ZNF528Q3MIS6 628 aa23.03■■□□□ 1.28
SNX3-202ENST00000349379 EFHC1Q5JVL4 640 aa23.03■■□□□ 1.28
SNX3-202ENST00000349379 PKN3Q6P5Z2 889 aa23.03■■□□□ 1.28
SNX3-202ENST00000349379 LRSAM1Q6UWE0 723 aa23.03■■□□□ 1.28
SNX3-202ENST00000349379 TPGS1Q6ZTW0 290 aa23.03■■□□□ 1.28
SNX3-202ENST00000349379 TOGARAM2Q6ZUX3 1019 aa23.03■■□□□ 1.28
SNX3-202ENST00000349379 CACNA2D4Q7Z3S7 1137 aa23.03■■□□□ 1.28
SNX3-202ENST00000349379 TAC4Q86UU9 113 aa23.03■■□□□ 1.28
SNX3-202ENST00000349379 NELL1Q92832 810 aa23.03■■□□□ 1.28
SNX3-202ENST00000349379 FCRL2Q96LA5 508 aaPredicted RBP23.03■■□□□ 1.28
SNX3-202ENST00000349379 BBS2Q9BXC9 721 aa23.03■■□□□ 1.28
SNX3-202ENST00000349379 WDR35Q9P2L0 1181 aa23.03■■□□□ 1.28
SNX3-202ENST00000349379 TLR6Q9Y2C9 796 aa23.03■■□□□ 1.28
SNX3-202ENST00000349379 EML5Q05BV3 1969 aa23.03■■□□□ 1.28
SNX3-202ENST00000349379 NEDD8-MDP1E9PL57 170 aa23.02■■□□□ 1.28
SNX3-202ENST00000349379 CAPN9O14815 690 aa23.02■■□□□ 1.28
SNX3-202ENST00000349379 TYRP14679 529 aa23.02■■□□□ 1.28
SNX3-202ENST00000349379 PLA2G5P39877 138 aa23.02■■□□□ 1.28
SNX3-202ENST00000349379 TBX4P57082 545 aa23.02■■□□□ 1.28
SNX3-202ENST00000349379 FYB2Q5VWT5 728 aa23.02■■□□□ 1.28
SNX3-202ENST00000349379 NUGGCQ68CJ6 796 aa23.02■■□□□ 1.28
SNX3-202ENST00000349379 OR6B2Q6IFH4 312 aa23.02■■□□□ 1.28
SNX3-202ENST00000349379 TRIM72Q6ZMU5 477 aa23.02■■□□□ 1.28
SNX3-202ENST00000349379 AZIN2Q96A70 460 aa23.02■■□□□ 1.28
SNX3-202ENST00000349379 C18orf8Q96DM3 657 aa23.02■■□□□ 1.28
SNX3-202ENST00000349379 C2orf42Q9NWW7 574 aa23.02■■□□□ 1.28
SNX3-202ENST00000349379 FBXO10Q9UK96 956 aa23.02■■□□□ 1.28
SNX3-202ENST00000349379 IRAK2O43187 625 aa23.01■■□□□ 1.27
SNX3-202ENST00000349379 KAT7O95251 611 aa23.01■■□□□ 1.27
SNX3-202ENST00000349379 CXCL12P48061 93 aa23.01■■□□□ 1.27
SNX3-202ENST00000349379 PITX1P78337 314 aaPredicted RBP23.01■■□□□ 1.27
SNX3-202ENST00000349379 SATB1Q01826 763 aa23.01■■□□□ 1.27
SNX3-202ENST00000349379 FIGNQ5HY92 759 aa23.01■■□□□ 1.27
SNX3-202ENST00000349379 NAA35Q5VZE5 725 aa23.01■■□□□ 1.27
SNX3-202ENST00000349379 ERICH1Q86X53 443 aa23.01■■□□□ 1.27
SNX3-202ENST00000349379 XYLT1Q86Y38 959 aa23.01■■□□□ 1.27
SNX3-202ENST00000349379 UNC45BQ8IWX7 931 aa23.01■■□□□ 1.27
SNX3-202ENST00000349379 DEFB106AQ8N104 65 aa23.01■■□□□ 1.27
SNX3-202ENST00000349379 NAT16Q8N8M0 369 aa23.01■■□□□ 1.27
SNX3-202ENST00000349379 ATOH1Q92858 354 aaPredicted RBP23.01■■□□□ 1.27
SNX3-202ENST00000349379 PCDHB18PQ96TA0 734 aa23.01■■□□□ 1.27
SNX3-202ENST00000349379 EDEM3Q9BZQ6 932 aa23.01■■□□□ 1.27
SNX3-202ENST00000349379 SYNCQ9H7C4 482 aa23.01■■□□□ 1.27
SNX3-202ENST00000349379 ARHGEF4Q9NR80 690 aa23.01■■□□□ 1.27
SNX3-202ENST00000349379 DAB1O75553 588 aa23■■□□□ 1.27
SNX3-202ENST00000349379 TRUB2O95900 331 aaKnown RBP23■■□□□ 1.27
SNX3-202ENST00000349379 APODP05090 189 aa23■■□□□ 1.27
SNX3-202ENST00000349379 UNGP13051 313 aaPredicted RBP23■■□□□ 1.27
SNX3-202ENST00000349379 FERP16591 822 aa23■■□□□ 1.27
SNX3-202ENST00000349379 NBL1P41271 181 aa23■■□□□ 1.27
SNX3-202ENST00000349379 GRIA2P42262 883 aa23■■□□□ 1.27
SNX3-202ENST00000349379 ZNF445P59923 1031 aa23■■□□□ 1.27
SNX3-202ENST00000349379 DCAF6Q58WW2 860 aa23■■□□□ 1.27
SNX3-202ENST00000349379 ADGRF1Q5T601 910 aa23■■□□□ 1.27
SNX3-202ENST00000349379 IRF2BP2Q7Z5L9 587 aa23■■□□□ 1.27
SNX3-202ENST00000349379 SFTPA1Q8IWL2 248 aa23■■□□□ 1.27
SNX3-202ENST00000349379 OLIG1Q8TAK6 271 aa23■■□□□ 1.27
SNX3-202ENST00000349379 ADAM32Q8TC27 787 aa23■■□□□ 1.27
SNX3-202ENST00000349379 CPA5Q8WXQ8 436 aa23■■□□□ 1.27
SNX3-202ENST00000349379 XPO6Q96QU8 1125 aaKnown RBP23■■□□□ 1.27
SNX3-202ENST00000349379 SYT11Q9BT88 431 aa23■■□□□ 1.27
SNX3-202ENST00000349379 TSPY26PQ9H489 355 aa23■■□□□ 1.27
SNX3-202ENST00000349379 FAM86C1Q9NVL1 165 aa23■■□□□ 1.27
SNX3-202ENST00000349379 DEC1Q9P2X7 70 aa23■■□□□ 1.27
SNX3-202ENST00000349379 K7ESF4 209 aa22.99■■□□□ 1.27
SNX3-202ENST00000349379 GRAP2O75791 330 aa22.99■■□□□ 1.27
SNX3-202ENST00000349379 CISD3P0C7P0 127 aa22.99■■□□□ 1.27
SNX3-202ENST00000349379 MMP8P22894 467 aa22.99■■□□□ 1.27
SNX3-202ENST00000349379 UBASH3AP57075 661 aa22.99■■□□□ 1.27
SNX3-202ENST00000349379 CSTF1Q05048 431 aaKnown RBP22.99■■□□□ 1.27
SNX3-202ENST00000349379 KDSRQ06136 332 aa22.99■■□□□ 1.27
SNX3-202ENST00000349379 PREPLQ4J6C6 727 aaPredicted RBP22.99■■□□□ 1.27
SNX3-202ENST00000349379 FAM133BQ5BKY9 247 aaKnown RBP22.99■■□□□ 1.27
SNX3-202ENST00000349379 TSSK4Q6SA08 328 aa22.99■■□□□ 1.27
SNX3-202ENST00000349379 TERB1Q8NA31 727 aa22.99■■□□□ 1.27
SNX3-202ENST00000349379 MSANTD4Q8NCY6 345 aa22.99■■□□□ 1.27
SNX3-202ENST00000349379 CCDC26Q8TAB7 109 aa22.99■■□□□ 1.27
SNX3-202ENST00000349379 USP33Q8TEY7 942 aa22.99■■□□□ 1.27
SNX3-202ENST00000349379 IRX2Q9BZI1 471 aaPredicted RBP22.99■■□□□ 1.27
SNX3-202ENST00000349379 DNAJC17Q9NVM6 304 aaKnown RBP22.99■■□□□ 1.27
SNX3-202ENST00000349379 PLK2Q9NYY3 685 aa22.99■■□□□ 1.27
SNX3-202ENST00000349379 ANTXRLA6NF34 631 aa22.98■■□□□ 1.27
SNX3-202ENST00000349379 LRRC53A6NM62 1247 aa22.98■■□□□ 1.27
SNX3-202ENST00000349379 PROB1E7EW31 1015 aa22.98■■□□□ 1.27
SNX3-202ENST00000349379 TRIM24O15164 1050 aa22.98■■□□□ 1.27
SNX3-202ENST00000349379 ACSL4O60488 711 aa22.98■■□□□ 1.27
SNX3-202ENST00000349379 ATG13O75143 517 aa22.98■■□□□ 1.27
SNX3-202ENST00000349379 NOS2P35228 1153 aa22.98■■□□□ 1.27
SNX3-202ENST00000349379 TNFRSF4P43489 277 aa22.98■■□□□ 1.27
SNX3-202ENST00000349379 CENPCQ03188 943 aa22.98■■□□□ 1.27
SNX3-202ENST00000349379 ARID5AQ03989 594 aa22.98■■□□□ 1.27
SNX3-202ENST00000349379 RNF43Q68DV7 783 aa22.98■■□□□ 1.27
SNX3-202ENST00000349379 GRAMD4Q6IC98 578 aa22.98■■□□□ 1.27
SNX3-202ENST00000349379 RPLP0P6Q8NHW5 317 aa22.98■■□□□ 1.27
SNX3-202ENST00000349379 FAM122AQ96E09 287 aa22.98■■□□□ 1.27
SNX3-202ENST00000349379 PHOX2BQ99453 314 aa22.98■■□□□ 1.27
SNX3-202ENST00000349379 AIPL1Q9NZN9 384 aa22.98■■□□□ 1.27
SNX3-202ENST00000349379 CCDC172P0C7W6 258 aa22.97■■□□□ 1.27
SNX3-202ENST00000349379 HOXA6P31267 233 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms