RNA–Protein interactions for RNA: ENST00000349038.8

PTBP1-201, Transcript of polypyrimidine tract binding protein 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PTBP1, Length 3,155 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTBP1-201ENST00000349038 SAPCD2Q86UD0 394 aa15.64■□□□□ 0.09
PTBP1-201ENST00000349038 KCTD6Q8NC69 237 aa15.64■□□□□ 0.09
PTBP1-201ENST00000349038 EPS8L2Q9H6S3 715 aa15.64■□□□□ 0.09
PTBP1-201ENST00000349038 THOP1P52888 689 aa15.63■□□□□ 0.09
PTBP1-201ENST00000349038 SLC18A1P54219 525 aa15.63■□□□□ 0.09
PTBP1-201ENST00000349038 NR1H2P55055 460 aa15.63■□□□□ 0.09
PTBP1-201ENST00000349038 C21orf59P57076 290 aa15.63■□□□□ 0.09
PTBP1-201ENST00000349038 Q3C1V9 767 aa15.63■□□□□ 0.09
PTBP1-201ENST00000349038 XKR9Q5GH70 373 aa15.63■□□□□ 0.09
PTBP1-201ENST00000349038 EGFLAMQ63HQ2 1017 aa15.63■□□□□ 0.09
PTBP1-201ENST00000349038 SCARA3Q6AZY7 606 aa15.63■□□□□ 0.09
PTBP1-201ENST00000349038 PCDH20Q8N6Y1 951 aaKnown RBP15.63■□□□□ 0.09
PTBP1-201ENST00000349038 EXD1Q8NHP7 514 aa15.63■□□□□ 0.09
PTBP1-201ENST00000349038 DEPDC1BQ8WUY9 529 aa15.63■□□□□ 0.09
PTBP1-201ENST00000349038 TFB1MQ8WVM0 346 aaKnown RBP15.63■□□□□ 0.09
PTBP1-201ENST00000349038 LENG8Q96PV6 779 aaPredicted RBP15.63■□□□□ 0.09
PTBP1-201ENST00000349038 MRPS26Q9BYN8 205 aaKnown RBP15.63■□□□□ 0.09
PTBP1-201ENST00000349038 GPAMQ9HCL2 828 aa15.63■□□□□ 0.09
PTBP1-201ENST00000349038 TIMMDC1Q9NPL8 285 aa15.63■□□□□ 0.09
PTBP1-201ENST00000349038 KDM1AO60341 852 aa15.63■□□□□ 0.09
PTBP1-201ENST00000349038 GRAP2O75791 330 aa15.63■□□□□ 0.09
PTBP1-201ENST00000349038 MT-CO1P00395 513 aa15.63■□□□□ 0.09
PTBP1-201ENST00000349038 CKMT2P17540 419 aa15.63■□□□□ 0.09
PTBP1-201ENST00000349038 PSMA2P25787 234 aa15.63■□□□□ 0.09
PTBP1-201ENST00000349038 SLC1A6P48664 564 aa15.63■□□□□ 0.09
PTBP1-201ENST00000349038 SNAPC2Q13487 334 aa15.63■□□□□ 0.09
PTBP1-201ENST00000349038 TRIM72Q6ZMU5 477 aa15.63■□□□□ 0.09
PTBP1-201ENST00000349038 SH3BP5LQ7L8J4 393 aa15.63■□□□□ 0.09
PTBP1-201ENST00000349038 DDHD1Q8NEL9 900 aa15.63■□□□□ 0.09
PTBP1-201ENST00000349038 ATP6V1E2Q96A05 226 aa15.63■□□□□ 0.09
PTBP1-201ENST00000349038 MRPL47Q9HD33 250 aaKnown RBP15.63■□□□□ 0.09
PTBP1-201ENST00000349038 PCDH12Q9NPG4 1184 aa15.63■□□□□ 0.09
PTBP1-201ENST00000349038 EPS15L1Q9UBC2 864 aa15.63■□□□□ 0.09
PTBP1-201ENST00000349038 TJP2Q9UDY2 1190 aa15.63■□□□□ 0.09
PTBP1-201ENST00000349038 PRR12Q9ULL5 1215 aa15.63■□□□□ 0.09
PTBP1-201ENST00000349038 SHOC2Q9UQ13 582 aa15.63■□□□□ 0.09
PTBP1-201ENST00000349038 PLLPQ9Y342 182 aa15.63■□□□□ 0.09
PTBP1-201ENST00000349038 MYO18AQ92614 2054 aaKnown RBP15.63■□□□□ 0.09
PTBP1-201ENST00000349038 UTRNP46939 3433 aa15.63■□□□□ 0.09
PTBP1-201ENST00000349038 ZNFX1Q9P2E3 1918 aaKnown RBP15.63■□□□□ 0.09
PTBP1-201ENST00000349038 MICAL3Q7RTP6 2002 aa15.63■□□□□ 0.09
PTBP1-201ENST00000349038 IPO5O00410 1097 aaKnown RBP15.63■□□□□ 0.09
PTBP1-201ENST00000349038 EPHA3P29320 983 aa15.63■□□□□ 0.09
PTBP1-201ENST00000349038 YAP1P46937 504 aaKnown RBP15.63■□□□□ 0.09
PTBP1-201ENST00000349038 NDST2P52849 883 aa15.63■□□□□ 0.09
PTBP1-201ENST00000349038 MRPS5P82675 430 aaKnown RBP15.63■□□□□ 0.09
PTBP1-201ENST00000349038 PTP4A2Q12974 167 aa15.63■□□□□ 0.09
PTBP1-201ENST00000349038 PRKG1Q13976 671 aa15.63■□□□□ 0.09
PTBP1-201ENST00000349038 CYP2A13Q16696 494 aa15.63■□□□□ 0.09
PTBP1-201ENST00000349038 CEP55Q53EZ4 464 aa15.63■□□□□ 0.09
PTBP1-201ENST00000349038 N4BP2L1Q5TBK1 243 aaPredicted RBP15.63■□□□□ 0.09
PTBP1-201ENST00000349038 FEZF2Q8TBJ5 459 aa15.63■□□□□ 0.09
PTBP1-201ENST00000349038 PIWIL2Q8TC59 973 aaKnown RBP15.63■□□□□ 0.09
PTBP1-201ENST00000349038 LZICQ8WZA0 190 aa15.63■□□□□ 0.09
PTBP1-201ENST00000349038 GPATCH1Q9BRR8 931 aaKnown RBP15.63■□□□□ 0.09
PTBP1-201ENST00000349038 PI4KBQ9UBF8 816 aa15.63■□□□□ 0.09
PTBP1-201ENST00000349038 CEPT1Q9Y6K0 416 aa15.63■□□□□ 0.09
PTBP1-201ENST00000349038 SAC3D1A6NKF1 404 aa15.62■□□□□ 0.09
PTBP1-201ENST00000349038 ADAM23O75077 832 aa15.62■□□□□ 0.09
PTBP1-201ENST00000349038 OXSR1O95747 527 aaPredicted RBP15.62■□□□□ 0.09
PTBP1-201ENST00000349038 PORP16435 677 aaPredicted RBP15.62■□□□□ 0.09
PTBP1-201ENST00000349038 EEF1B2P24534 225 aaKnown RBP15.62■□□□□ 0.09
PTBP1-201ENST00000349038 CD97P48960 835 aa15.62■□□□□ 0.09
PTBP1-201ENST00000349038 GTF2A2P52657 109 aa15.62■□□□□ 0.09
PTBP1-201ENST00000349038 TRAF2Q12933 501 aa15.62■□□□□ 0.09
PTBP1-201ENST00000349038 PDAP1Q13442 181 aaKnown RBP15.62■□□□□ 0.09
PTBP1-201ENST00000349038 DLGAP5Q15398 846 aa15.62■□□□□ 0.09
PTBP1-201ENST00000349038 TFDP3Q5H9I0 405 aa15.62■□□□□ 0.09
PTBP1-201ENST00000349038 ZNF362Q5T0B9 420 aaPredicted RBP15.62■□□□□ 0.09
PTBP1-201ENST00000349038 TMEM198Q66K66 360 aa15.62■□□□□ 0.09
PTBP1-201ENST00000349038 RTKN2Q8IZC4 609 aa15.62■□□□□ 0.09
PTBP1-201ENST00000349038 PARP8Q8N3A8 854 aa15.62■□□□□ 0.09
PTBP1-201ENST00000349038 FBXW8Q8N3Y1 598 aa15.62■□□□□ 0.09
PTBP1-201ENST00000349038 FAM47BQ8NA70 645 aa15.62■□□□□ 0.09
PTBP1-201ENST00000349038 TRAF3IP1Q8TDR0 691 aaPredicted RBP15.62■□□□□ 0.09
PTBP1-201ENST00000349038 AGAP3Q96P47 875 aa15.62■□□□□ 0.09
PTBP1-201ENST00000349038 PCDHAC1Q9H158 963 aa15.62■□□□□ 0.09
PTBP1-201ENST00000349038 AVENQ9NQS1 362 aaPredicted RBP15.62■□□□□ 0.09
PTBP1-201ENST00000349038 FAIMQ9NVQ4 179 aa15.62■□□□□ 0.09
PTBP1-201ENST00000349038 COQ4Q9Y3A0 265 aa15.62■□□□□ 0.09
PTBP1-201ENST00000349038 ZBBXA8MT70 800 aa15.62■□□□□ 0.09
PTBP1-201ENST00000349038 PSMD12O00232 456 aaPredicted RBP15.62■□□□□ 0.09
PTBP1-201ENST00000349038 KCNH1O95259 989 aa15.62■□□□□ 0.09
PTBP1-201ENST00000349038 GSTM4Q03013 218 aa15.62■□□□□ 0.09
PTBP1-201ENST00000349038 ART3Q13508 389 aa15.62■□□□□ 0.09
PTBP1-201ENST00000349038 MTX3Q5HYI7 312 aa15.62■□□□□ 0.09
PTBP1-201ENST00000349038 LARGE2Q8N3Y3 721 aa15.62■□□□□ 0.09
PTBP1-201ENST00000349038 SLC35B4Q969S0 331 aa15.62■□□□□ 0.09
PTBP1-201ENST00000349038 ZFRQ96KR1 1074 aaKnown RBP15.62■□□□□ 0.09
PTBP1-201ENST00000349038 PPP1R10Q96QC0 940 aaKnown RBP15.62■□□□□ 0.09
PTBP1-201ENST00000349038 FOXP3Q9BZS1 431 aa15.62■□□□□ 0.09
PTBP1-201ENST00000349038 TBC1D22BQ9NU19 505 aa15.62■□□□□ 0.09
PTBP1-201ENST00000349038 THEGQ9P2T0 379 aa15.62■□□□□ 0.09
PTBP1-201ENST00000349038 SSX2IPQ9Y2D8 614 aa15.62■□□□□ 0.09
PTBP1-201ENST00000349038 PCDHAC2Q9Y5I4 1007 aa15.62■□□□□ 0.09
PTBP1-201ENST00000349038 SCINQ9Y6U3 715 aa15.62■□□□□ 0.09
PTBP1-201ENST00000349038 CSH1P0DML2 217 aa15.61■□□□□ 0.09
PTBP1-201ENST00000349038 CSH2P0DML3 217 aa15.61■□□□□ 0.09
PTBP1-201ENST00000349038 ALDH1B1P30837 517 aa15.61■□□□□ 0.09
PTBP1-201ENST00000349038 GPC3P51654 580 aa15.61■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 32 ms