RNA–Protein interactions for RNA: ENST00000348749.9

CHRNA1-202, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CHRNA1, Length 1,984 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-202ENST00000348749 TSPYL2Q9H2G4 693 aaPredicted RBP10.66□□□□□ -0.7
CHRNA1-202ENST00000348749 GPRC5CQ9NQ84 441 aa10.66□□□□□ -0.7
CHRNA1-202ENST00000348749 STK39Q9UEW8 545 aa10.66□□□□□ -0.7
CHRNA1-202ENST00000348749 XPO7Q9UIA9 1087 aaKnown RBP10.66□□□□□ -0.7
CHRNA1-202ENST00000348749 PRPF19Q9UMS4 504 aaKnown RBP10.66□□□□□ -0.7
CHRNA1-202ENST00000348749 PCDHAC2Q9Y5I4 1007 aa10.66□□□□□ -0.7
CHRNA1-202ENST00000348749 TEX264Q9Y6I9 313 aa10.66□□□□□ -0.7
CHRNA1-202ENST00000348749 MYOCOSA0A1B0GUC4 107 aa10.65□□□□□ -0.7
CHRNA1-202ENST00000348749 TCRBV7S3A2A0A539 114 aa10.65□□□□□ -0.7
CHRNA1-202ENST00000348749 KBTBD13C9JR72 458 aa10.65□□□□□ -0.7
CHRNA1-202ENST00000348749 H0YJX3 145 aa10.65□□□□□ -0.7
CHRNA1-202ENST00000348749 RFPL1O75677 317 aa10.65□□□□□ -0.7
CHRNA1-202ENST00000348749 PIGRP01833 764 aa10.65□□□□□ -0.7
CHRNA1-202ENST00000348749 C8BP07358 591 aa10.65□□□□□ -0.7
CHRNA1-202ENST00000348749 DSG3P32926 999 aa10.65□□□□□ -0.7
CHRNA1-202ENST00000348749 CAP2P40123 477 aa10.65□□□□□ -0.7
CHRNA1-202ENST00000348749 CCR3P51677 355 aa10.65□□□□□ -0.7
CHRNA1-202ENST00000348749 AP3M2P53677 418 aa10.65□□□□□ -0.7
CHRNA1-202ENST00000348749 MRPS9P82933 396 aaKnown RBP10.65□□□□□ -0.7
CHRNA1-202ENST00000348749 TXNL4AP83876 142 aaKnown RBP10.65□□□□□ -0.7
CHRNA1-202ENST00000348749 SPP2Q13103 211 aa10.65□□□□□ -0.7
CHRNA1-202ENST00000348749 SLFN12LQ6IEE8 588 aa10.65□□□□□ -0.7
CHRNA1-202ENST00000348749 ISLR2Q6UXK2 745 aa10.65□□□□□ -0.7
CHRNA1-202ENST00000348749 IGDCC3Q8IVU1 814 aa10.65□□□□□ -0.7
CHRNA1-202ENST00000348749 CHERPQ8IWX8 916 aaKnown RBP10.65□□□□□ -0.7
CHRNA1-202ENST00000348749 TRIML2Q8N7C3 387 aa10.65□□□□□ -0.7
CHRNA1-202ENST00000348749 ATP6V0A1Q93050 837 aa10.65□□□□□ -0.7
CHRNA1-202ENST00000348749 ZNF778Q96MU6 729 aa10.65□□□□□ -0.7
CHRNA1-202ENST00000348749 RTKNQ9BST9 563 aa10.65□□□□□ -0.7
CHRNA1-202ENST00000348749 NUF2Q9BZD4 464 aa10.65□□□□□ -0.7
CHRNA1-202ENST00000348749 CYP4F11Q9HBI6 524 aa10.65□□□□□ -0.7
CHRNA1-202ENST00000348749 PDLIM7Q9NR12 457 aa10.65□□□□□ -0.7
CHRNA1-202ENST00000348749 VPS45Q9NRW7 570 aa10.65□□□□□ -0.7
CHRNA1-202ENST00000348749 ARHGAP28Q9P2N2 729 aa10.65□□□□□ -0.7
CHRNA1-202ENST00000348749 CDH7Q9ULB5 785 aa10.65□□□□□ -0.7
CHRNA1-202ENST00000348749 ARHGAP26Q9UNA1 814 aa10.65□□□□□ -0.7
CHRNA1-202ENST00000348749 COQ6Q9Y2Z9 468 aa10.65□□□□□ -0.7
CHRNA1-202ENST00000348749 FAM32AQ9Y421 112 aaKnown RBP10.65□□□□□ -0.7
CHRNA1-202ENST00000348749 SIP14410 1827 aa10.65□□□□□ -0.7
CHRNA1-202ENST00000348749 SOBPA7XYQ1 873 aa10.65□□□□□ -0.71
CHRNA1-202ENST00000348749 CYB561D2O14569 222 aa10.65□□□□□ -0.71
CHRNA1-202ENST00000348749 ONECUT3O60422 494 aaPredicted RBP10.65□□□□□ -0.71
CHRNA1-202ENST00000348749 CALCAP01258 141 aa10.65□□□□□ -0.71
CHRNA1-202ENST00000348749 PSMC3P17980 439 aa10.65□□□□□ -0.71
CHRNA1-202ENST00000348749 HMOX2P30519 316 aa10.65□□□□□ -0.71
CHRNA1-202ENST00000348749 CRHR1P34998 444 aa10.65□□□□□ -0.71
CHRNA1-202ENST00000348749 BCAP31P51572 246 aa10.65□□□□□ -0.71
CHRNA1-202ENST00000348749 ZNF132P52740 706 aa10.65□□□□□ -0.71
CHRNA1-202ENST00000348749 GDF10P55107 478 aa10.65□□□□□ -0.71
CHRNA1-202ENST00000348749 CDKL1Q00532 357 aa10.65□□□□□ -0.71
CHRNA1-202ENST00000348749 KCNC4Q03721 635 aa10.65□□□□□ -0.71
CHRNA1-202ENST00000348749 UGCGQ16739 394 aa10.65□□□□□ -0.71
CHRNA1-202ENST00000348749 C2CD6Q53TS8 623 aa10.65□□□□□ -0.71
CHRNA1-202ENST00000348749 C6orf52Q5T4I8 152 aa10.65□□□□□ -0.71
CHRNA1-202ENST00000348749 STXBP5Q5T5C0 1151 aa10.65□□□□□ -0.71
CHRNA1-202ENST00000348749 WDR78Q5VTH9 848 aa10.65□□□□□ -0.71
CHRNA1-202ENST00000348749 SYTL5Q8TDW5 730 aaPredicted RBP10.65□□□□□ -0.71
CHRNA1-202ENST00000348749 ZNF516Q92618 1163 aa10.65□□□□□ -0.71
CHRNA1-202ENST00000348749 EIF2AQ9BY44 585 aaKnown RBP10.65□□□□□ -0.71
CHRNA1-202ENST00000348749 COL20A1Q9P218 1284 aa10.65□□□□□ -0.71
CHRNA1-202ENST00000348749 BCAP29Q9UHQ4 241 aa10.65□□□□□ -0.71
CHRNA1-202ENST00000348749 TTLL3Q9Y4R7 772 aa10.65□□□□□ -0.71
CHRNA1-202ENST00000348749 PCDHB4Q9Y5E5 795 aa10.65□□□□□ -0.71
CHRNA1-202ENST00000348749 PCDHA10Q9Y5I2 948 aa10.65□□□□□ -0.71
CHRNA1-202ENST00000348749 IVNS1ABPQ9Y6Y0 642 aa10.65□□□□□ -0.71
CHRNA1-202ENST00000348749 MYH9P35579 1960 aaKnown RBP10.64□□□□□ -0.71
CHRNA1-202ENST00000348749 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP10.64□□□□□ -0.71
CHRNA1-202ENST00000348749 TCRBV5S1A1TA0A578 114 aa10.64□□□□□ -0.71
CHRNA1-202ENST00000348749 ADAM23O75077 832 aa10.64□□□□□ -0.71
CHRNA1-202ENST00000348749 BMP10O95393 424 aa10.64□□□□□ -0.71
CHRNA1-202ENST00000348749 H6PDO95479 791 aa10.64□□□□□ -0.71
CHRNA1-202ENST00000348749 ZNF829Q3KNS6 432 aaPredicted RBP10.64□□□□□ -0.71
CHRNA1-202ENST00000348749 ZFYVE27Q5T4F4 411 aa10.64□□□□□ -0.71
CHRNA1-202ENST00000348749 PDPK2PQ6A1A2 396 aa10.64□□□□□ -0.71
CHRNA1-202ENST00000348749 STYK1Q6J9G0 422 aa10.64□□□□□ -0.71
CHRNA1-202ENST00000348749 DCDC5Q6ZRR9 648 aa10.64□□□□□ -0.71
CHRNA1-202ENST00000348749 FRMD7Q6ZUT3 714 aa10.64□□□□□ -0.71
CHRNA1-202ENST00000348749 SCAIQ8N9R8 606 aa10.64□□□□□ -0.71
CHRNA1-202ENST00000348749 IL31RAQ8NI17 732 aa10.64□□□□□ -0.71
CHRNA1-202ENST00000348749 PPP4R1Q8TF05 950 aa10.64□□□□□ -0.71
CHRNA1-202ENST00000348749 NLRP7Q8WX94 980 aa10.64□□□□□ -0.71
CHRNA1-202ENST00000348749 LPAR1Q92633 364 aa10.64□□□□□ -0.71
CHRNA1-202ENST00000348749 DLG3Q92796 817 aa10.64□□□□□ -0.71
CHRNA1-202ENST00000348749 GPRASP2Q96D09 838 aa10.64□□□□□ -0.71
CHRNA1-202ENST00000348749 SERPINI1Q99574 410 aa10.64□□□□□ -0.71
CHRNA1-202ENST00000348749 FAM213AQ9BRX8 229 aa10.64□□□□□ -0.71
CHRNA1-202ENST00000348749 TRIM56Q9BRZ2 755 aaKnown RBP10.64□□□□□ -0.71
CHRNA1-202ENST00000348749 PI4K2AQ9BTU6 479 aa10.64□□□□□ -0.71
CHRNA1-202ENST00000348749 APOL6Q9BWW8 343 aa10.64□□□□□ -0.71
CHRNA1-202ENST00000348749 FRMD8Q9BZ67 464 aaPredicted RBP10.64□□□□□ -0.71
CHRNA1-202ENST00000348749 SELENONQ9NZV5 590 aa10.64□□□□□ -0.71
CHRNA1-202ENST00000348749 VPS28Q9UK41 221 aa10.64□□□□□ -0.71
CHRNA1-202ENST00000348749 DNAJC16Q9Y2G8 782 aa10.64□□□□□ -0.71
CHRNA1-202ENST00000348749 HEY1Q9Y5J3 304 aa10.64□□□□□ -0.71
CHRNA1-202ENST00000348749 HEMK1Q9Y5R4 338 aaPredicted RBP10.64□□□□□ -0.71
CHRNA1-202ENST00000348749 PRSS51A0A1B0GVH4 220 aa10.63□□□□□ -0.71
CHRNA1-202ENST00000348749 H3BNH8 94 aa10.63□□□□□ -0.71
CHRNA1-202ENST00000348749 TRDMT1O14717 391 aaKnown RBP10.63□□□□□ -0.71
CHRNA1-202ENST00000348749 BAIAP3O94812 1187 aa10.63□□□□□ -0.71
CHRNA1-202ENST00000348749 COX4I1P13073 169 aa10.63□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 81.2 ms