RNA–Protein interactions for RNA: ENST00000347739.3

TNFRSF10B-202, Transcript of TNF receptor superfamily member 10b, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFRSF10B, Length 1,723 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFRSF10B-202ENST00000347739 RBL1P28749 1068 aa23.3■■□□□ 1.32
TNFRSF10B-202ENST00000347739 MAGEA11P43364 429 aa23.3■■□□□ 1.32
TNFRSF10B-202ENST00000347739 SLC11A1P49279 550 aa23.3■■□□□ 1.32
TNFRSF10B-202ENST00000347739 ELAVL2Q12926 359 aaKnown RBP23.3■■□□□ 1.32
TNFRSF10B-202ENST00000347739 DPYSQ14117 519 aa23.3■■□□□ 1.32
TNFRSF10B-202ENST00000347739 ARL13BQ3SXY8 428 aa23.3■■□□□ 1.32
TNFRSF10B-202ENST00000347739 ZNF280DQ6N043 979 aa23.3■■□□□ 1.32
TNFRSF10B-202ENST00000347739 MFSD5Q6N075 450 aa23.3■■□□□ 1.32
TNFRSF10B-202ENST00000347739 ARFGAP2Q8N6H7 521 aa23.3■■□□□ 1.32
TNFRSF10B-202ENST00000347739 SCAMP5Q8TAC9 235 aa23.3■■□□□ 1.32
TNFRSF10B-202ENST00000347739 ADAM32Q8TC27 787 aa23.3■■□□□ 1.32
TNFRSF10B-202ENST00000347739 EDEM1Q92611 657 aa23.3■■□□□ 1.32
TNFRSF10B-202ENST00000347739 QKIQ96PU8 341 aaKnown RBP eCLIP23.3■■□□□ 1.323e-8■■■■□ 20.4
TNFRSF10B-202ENST00000347739 SAYSD1Q9NPB0 183 aa23.3■■□□□ 1.32
TNFRSF10B-202ENST00000347739 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP23.3■■□□□ 1.32
TNFRSF10B-202ENST00000347739 RASGRF2O14827 1237 aa23.3■■□□□ 1.32
TNFRSF10B-202ENST00000347739 ALOX15BO15296 676 aa23.3■■□□□ 1.32
TNFRSF10B-202ENST00000347739 EIF3HO15372 352 aaKnown RBP eCLIP23.3■■□□□ 1.32
TNFRSF10B-202ENST00000347739 IGLV3-25P01717 112 aa23.3■■□□□ 1.32
TNFRSF10B-202ENST00000347739 HCAR3P49019 387 aa23.3■■□□□ 1.32
TNFRSF10B-202ENST00000347739 CCL23P55773 120 aa23.3■■□□□ 1.32
TNFRSF10B-202ENST00000347739 HIF1AQ16665 826 aa23.3■■□□□ 1.32
TNFRSF10B-202ENST00000347739 FAM171A1Q5VUB5 890 aa23.3■■□□□ 1.32
TNFRSF10B-202ENST00000347739 C8orf48Q96LL4 319 aa23.3■■□□□ 1.32
TNFRSF10B-202ENST00000347739 GPR62Q9BZJ7 368 aa23.3■■□□□ 1.32
TNFRSF10B-202ENST00000347739 TMPRSS4Q9NRS4 437 aa23.3■■□□□ 1.32
TNFRSF10B-202ENST00000347739 ABCC13Q9NSE7 274 aa23.3■■□□□ 1.32
TNFRSF10B-202ENST00000347739 ETNK2Q9NVF9 386 aa23.3■■□□□ 1.32
TNFRSF10B-202ENST00000347739 ABI2Q9NYB9 513 aaPredicted RBP23.3■■□□□ 1.32
TNFRSF10B-202ENST00000347739 BCCIPQ9P287 314 aaKnown RBP eCLIP23.3■■□□□ 1.32
TNFRSF10B-202ENST00000347739 NOVA2Q9UNW9 492 aaKnown RBP23.3■■□□□ 1.32
TNFRSF10B-202ENST00000347739 PLXNA3P51805 1871 aa23.29■■□□□ 1.32
TNFRSF10B-202ENST00000347739 TRIM66O15016 1216 aa23.29■■□□□ 1.32
TNFRSF10B-202ENST00000347739 DGKIO75912 1065 aa23.29■■□□□ 1.32
TNFRSF10B-202ENST00000347739 ARL4CP56559 192 aa23.29■■□□□ 1.32
TNFRSF10B-202ENST00000347739 TLE2Q04725 743 aa23.29■■□□□ 1.32
TNFRSF10B-202ENST00000347739 CBLBQ13191 982 aa23.29■■□□□ 1.32
TNFRSF10B-202ENST00000347739 EIF4EBP2Q13542 120 aaPredicted RBP23.29■■□□□ 1.32
TNFRSF10B-202ENST00000347739 PAFAH1B3Q15102 231 aaKnown RBP23.29■■□□□ 1.32
TNFRSF10B-202ENST00000347739 TRIM60Q495X7 471 aa23.29■■□□□ 1.32
TNFRSF10B-202ENST00000347739 CTXN3Q4LDR2 81 aa23.29■■□□□ 1.32
TNFRSF10B-202ENST00000347739 ANKRD22Q5VYY1 191 aa23.29■■□□□ 1.32
TNFRSF10B-202ENST00000347739 TAC4Q86UU9 113 aa23.29■■□□□ 1.32
TNFRSF10B-202ENST00000347739 UHMK1Q8TAS1 419 aaKnown RBP23.29■■□□□ 1.32
TNFRSF10B-202ENST00000347739 DQX1Q8TE96 717 aaKnown RBP23.29■■□□□ 1.32
TNFRSF10B-202ENST00000347739 C9orf72Q96LT7 481 aa23.29■■□□□ 1.32
TNFRSF10B-202ENST00000347739 SERPINB12Q96P63 405 aa23.29■■□□□ 1.32
TNFRSF10B-202ENST00000347739 PCDHB5Q9Y5E4 795 aa23.29■■□□□ 1.32
TNFRSF10B-202ENST00000347739 MYO16Q9Y6X6 1858 aa23.29■■□□□ 1.32
TNFRSF10B-202ENST00000347739 E7ESA3 106 aa23.28■■□□□ 1.32
TNFRSF10B-202ENST00000347739 EEF2KO00418 725 aaKnown RBP23.28■■□□□ 1.32
TNFRSF10B-202ENST00000347739 CHADO15335 359 aa23.28■■□□□ 1.32
TNFRSF10B-202ENST00000347739 AGTP01019 485 aa23.28■■□□□ 1.32
TNFRSF10B-202ENST00000347739 GALTP07902 379 aa23.28■■□□□ 1.32
TNFRSF10B-202ENST00000347739 YWHAGP61981 247 aaKnown RBP eCLIP23.28■■□□□ 1.32
TNFRSF10B-202ENST00000347739 KCNJ11Q14654 390 aa23.28■■□□□ 1.32
TNFRSF10B-202ENST00000347739 TNFAIP8L3Q5GJ75 292 aa23.28■■□□□ 1.32
TNFRSF10B-202ENST00000347739 KCNT2Q6UVM3 1135 aa23.28■■□□□ 1.32
TNFRSF10B-202ENST00000347739 RFX8Q6ZV50 586 aa23.28■■□□□ 1.32
TNFRSF10B-202ENST00000347739 B4GALNT4Q76KP1 1039 aa23.28■■□□□ 1.32
TNFRSF10B-202ENST00000347739 LRRC43Q8N309 656 aa23.28■■□□□ 1.32
TNFRSF10B-202ENST00000347739 EPS8L3Q8TE67 593 aaKnown RBP23.28■■□□□ 1.32
TNFRSF10B-202ENST00000347739 CAPS2Q9BXY5 557 aa23.28■■□□□ 1.32
TNFRSF10B-202ENST00000347739 PPP1R12CQ9BZL4 782 aa23.28■■□□□ 1.32
TNFRSF10B-202ENST00000347739 STMN4Q9H169 189 aaPredicted RBP23.28■■□□□ 1.32
TNFRSF10B-202ENST00000347739 WDCPQ9H6R7 721 aa23.28■■□□□ 1.32
TNFRSF10B-202ENST00000347739 ANLNQ9NQW6 1124 aa23.28■■□□□ 1.32
TNFRSF10B-202ENST00000347739 WBP1LQ9NX94 342 aa23.28■■□□□ 1.32
TNFRSF10B-202ENST00000347739 TBKBP1A7MCY6 615 aa23.28■■□□□ 1.32
TNFRSF10B-202ENST00000347739 I6L893 689 aaPredicted RBP23.28■■□□□ 1.32
TNFRSF10B-202ENST00000347739 RGS16O15492 202 aaPredicted RBP23.28■■□□□ 1.32
TNFRSF10B-202ENST00000347739 GCATO75600 419 aa23.28■■□□□ 1.32
TNFRSF10B-202ENST00000347739 NRLP54845 237 aa23.28■■□□□ 1.32
TNFRSF10B-202ENST00000347739 BASP1P80723 227 aaKnown RBP23.28■■□□□ 1.32
TNFRSF10B-202ENST00000347739 DNAJC21Q5F1R6 531 aaKnown RBP23.28■■□□□ 1.32
TNFRSF10B-202ENST00000347739 FUT10Q6P4F1 479 aa23.28■■□□□ 1.32
TNFRSF10B-202ENST00000347739 OXCT2Q9BYC2 517 aaPredicted RBP23.28■■□□□ 1.32
TNFRSF10B-202ENST00000347739 TBX21Q9UL17 535 aa23.28■■□□□ 1.32
TNFRSF10B-202ENST00000347739 DCLK1O15075 740 aa23.27■■□□□ 1.32
TNFRSF10B-202ENST00000347739 CREB3O43889 395 aa23.27■■□□□ 1.32
TNFRSF10B-202ENST00000347739 TMEM63AO94886 807 aa23.27■■□□□ 1.32
TNFRSF10B-202ENST00000347739 MAP3K6O95382 1288 aa23.27■■□□□ 1.32
TNFRSF10B-202ENST00000347739 CAPN2P17655 700 aa23.27■■□□□ 1.32
TNFRSF10B-202ENST00000347739 CYP2C18P33260 490 aa23.27■■□□□ 1.32
TNFRSF10B-202ENST00000347739 MAGEA6P43360 314 aa23.27■■□□□ 1.32
TNFRSF10B-202ENST00000347739 MAGOHP61326 146 aaKnown RBP23.27■■□□□ 1.32
TNFRSF10B-202ENST00000347739 STAT4Q14765 748 aa23.27■■□□□ 1.32
TNFRSF10B-202ENST00000347739 GLIPR1L2Q4G1C9 344 aa23.27■■□□□ 1.32
TNFRSF10B-202ENST00000347739 SCN4BQ8IWT1 228 aa23.27■■□□□ 1.32
TNFRSF10B-202ENST00000347739 FRMD8Q9BZ67 464 aaPredicted RBP23.27■■□□□ 1.32
TNFRSF10B-202ENST00000347739 TMEM51Q9NW97 253 aa23.27■■□□□ 1.32
TNFRSF10B-202ENST00000347739 RAD54BQ9Y620 910 aa23.27■■□□□ 1.32
TNFRSF10B-202ENST00000347739 ZNF638Q14966 1978 aaKnown RBP23.26■■□□□ 1.31
TNFRSF10B-202ENST00000347739 TLDC2A0PJX2 215 aa23.26■■□□□ 1.31
TNFRSF10B-202ENST00000347739 C5orf60A6NFR6 353 aa23.26■■□□□ 1.31
TNFRSF10B-202ENST00000347739 MFSD11O43934 449 aa23.26■■□□□ 1.31
TNFRSF10B-202ENST00000347739 TBC1D4O60343 1298 aa23.26■■□□□ 1.31
TNFRSF10B-202ENST00000347739 ZNF189O75820 626 aaPredicted RBP23.26■■□□□ 1.31
TNFRSF10B-202ENST00000347739 IVLP07476 585 aa23.26■■□□□ 1.31
TNFRSF10B-202ENST00000347739 DMTNQ08495 405 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms