RNA–Protein interactions for RNA: ENST00000345662.5

SPAST-202, Transcript of spastin, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SPAST, Length 5,116 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPAST-202ENST00000345662 CHKAP35790 457 aa17.91■□□□□ 0.46
SPAST-202ENST00000345662 KRT20P35900 424 aa17.91■□□□□ 0.46
SPAST-202ENST00000345662 GRIK1P39086 918 aa17.91■□□□□ 0.46
SPAST-202ENST00000345662 TRAF3Q13114 568 aa17.91■□□□□ 0.46
SPAST-202ENST00000345662 GIPC3Q8TF64 312 aa17.91■□□□□ 0.46
SPAST-202ENST00000345662 DRG1Q9Y295 367 aaKnown RBP17.91■□□□□ 0.46
SPAST-202ENST00000345662 KIAA1210Q9ULL0 1709 aa17.91■□□□□ 0.46
SPAST-202ENST00000345662 LCA5LO95447 670 aa17.91■□□□□ 0.46
SPAST-202ENST00000345662 MMP10P09238 476 aa17.91■□□□□ 0.46
SPAST-202ENST00000345662 ZSCAN5DPP0CG00 497 aa17.91■□□□□ 0.46
SPAST-202ENST00000345662 IMPDH2P12268 514 aa17.91■□□□□ 0.46
SPAST-202ENST00000345662 SP100P23497 879 aaPredicted RBP17.91■□□□□ 0.46
SPAST-202ENST00000345662 TTC7BQ86TV6 843 aa17.91■□□□□ 0.46
SPAST-202ENST00000345662 EID3Q8N140 333 aa17.91■□□□□ 0.46
SPAST-202ENST00000345662 TEX13BQ9BXU2 312 aa17.91■□□□□ 0.46
SPAST-202ENST00000345662 ROGDIQ9GZN7 287 aa17.91■□□□□ 0.46
SPAST-202ENST00000345662 CACNA2D2Q9NY47 1150 aa17.91■□□□□ 0.46
SPAST-202ENST00000345662 PIN4Q9Y237 131 aaKnown RBP17.91■□□□□ 0.46
SPAST-202ENST00000345662 DDX52Q9Y2R4 599 aaKnown RBP eCLIP17.91■□□□□ 0.46
SPAST-202ENST00000345662 TMA7Q9Y2S6 64 aaKnown RBP17.91■□□□□ 0.46
SPAST-202ENST00000345662 LMTK2Q8IWU2 1503 aa17.91■□□□□ 0.46
SPAST-202ENST00000345662 WDR27A2RRH5 827 aa17.91■□□□□ 0.46
SPAST-202ENST00000345662 RNF225M0QZC1 329 aaPredicted RBP17.91■□□□□ 0.46
SPAST-202ENST00000345662 FGFR3P22607 806 aa17.91■□□□□ 0.46
SPAST-202ENST00000345662 FLT3P36888 993 aa17.91■□□□□ 0.46
SPAST-202ENST00000345662 ORC1Q13415 861 aa17.91■□□□□ 0.46
SPAST-202ENST00000345662 NAB1Q13506 487 aa17.91■□□□□ 0.46
SPAST-202ENST00000345662 SPATA20Q8TB22 786 aa17.91■□□□□ 0.46
SPAST-202ENST00000345662 CAPSLQ8WWF8 208 aa17.91■□□□□ 0.46
SPAST-202ENST00000345662 RNF145Q96MT1 663 aa17.91■□□□□ 0.46
SPAST-202ENST00000345662 SMARCAD1Q9H4L7 1026 aa17.91■□□□□ 0.46
SPAST-202ENST00000345662 ZNF682O95780 498 aa17.9■□□□□ 0.46
SPAST-202ENST00000345662 GNL1P36915 607 aaPredicted RBP17.9■□□□□ 0.46
SPAST-202ENST00000345662 ST13P50502 369 aaKnown RBP17.9■□□□□ 0.46
SPAST-202ENST00000345662 BST1Q10588 318 aa17.9■□□□□ 0.46
SPAST-202ENST00000345662 TAF5Q15542 800 aa17.9■□□□□ 0.46
SPAST-202ENST00000345662 TRPC4APQ8TEL6 797 aa17.9■□□□□ 0.46
SPAST-202ENST00000345662 APOL2Q9BQE5 337 aa17.9■□□□□ 0.46
SPAST-202ENST00000345662 PIF1Q9H611 641 aa17.9■□□□□ 0.46
SPAST-202ENST00000345662 TAS2R14Q9NYV8 317 aa17.9■□□□□ 0.46
SPAST-202ENST00000345662 CCDC167Q9P0B6 97 aa17.9■□□□□ 0.46
SPAST-202ENST00000345662 TNFRSF11AQ9Y6Q6 616 aaPredicted RBP17.9■□□□□ 0.46
SPAST-202ENST00000345662 PTGES3LE9PB15 166 aa17.9■□□□□ 0.46
SPAST-202ENST00000345662 ADRA2BP18089 450 aa17.9■□□□□ 0.46
SPAST-202ENST00000345662 JAK1P23458 1154 aa17.9■□□□□ 0.46
SPAST-202ENST00000345662 MTTPP55157 894 aa17.9■□□□□ 0.46
SPAST-202ENST00000345662 SLFN11Q7Z7L1 901 aa17.9■□□□□ 0.46
SPAST-202ENST00000345662 SPATA2LQ8IUW3 424 aaPredicted RBP17.9■□□□□ 0.46
SPAST-202ENST00000345662 ZNF606Q8WXB4 792 aa17.9■□□□□ 0.46
SPAST-202ENST00000345662 DEPDC7Q96QD5 511 aa17.9■□□□□ 0.46
SPAST-202ENST00000345662 PHACTR1Q9C0D0 580 aa17.9■□□□□ 0.46
SPAST-202ENST00000345662 RMI1Q9H9A7 625 aa17.9■□□□□ 0.46
SPAST-202ENST00000345662 COL3A1P02461 1466 aaPredicted RBP17.9■□□□□ 0.46
SPAST-202ENST00000345662 NPTXRO95502 500 aa17.9■□□□□ 0.46
SPAST-202ENST00000345662 SERPINA6P08185 405 aa17.9■□□□□ 0.46
SPAST-202ENST00000345662 COX4I1P13073 169 aa17.9■□□□□ 0.46
SPAST-202ENST00000345662 FGFR2P21802 821 aa17.9■□□□□ 0.46
SPAST-202ENST00000345662 CYP2F1P24903 491 aa17.9■□□□□ 0.46
SPAST-202ENST00000345662 DPYSL3Q14195 570 aa17.9■□□□□ 0.46
SPAST-202ENST00000345662 CBWD6Q4V339 395 aa17.9■□□□□ 0.46
SPAST-202ENST00000345662 CBWD3Q5JTY5 395 aa17.9■□□□□ 0.46
SPAST-202ENST00000345662 CBWD5Q5RIA9 395 aa17.9■□□□□ 0.46
SPAST-202ENST00000345662 FAM9CQ8IZT9 166 aa17.9■□□□□ 0.46
SPAST-202ENST00000345662 AP4B1Q9Y6B7 739 aa17.9■□□□□ 0.46
SPAST-202ENST00000345662 SLIT1O75093 1534 aa17.9■□□□□ 0.46
SPAST-202ENST00000345662 ARIH2O95376 493 aa17.9■□□□□ 0.46
SPAST-202ENST00000345662 NCF4Q15080 339 aa17.9■□□□□ 0.46
SPAST-202ENST00000345662 UGT3A1Q6NUS8 523 aa17.9■□□□□ 0.46
SPAST-202ENST00000345662 LNX1Q8TBB1 728 aaPredicted RBP17.9■□□□□ 0.46
SPAST-202ENST00000345662 SLC10A4Q96EP9 437 aa17.9■□□□□ 0.46
SPAST-202ENST00000345662 SNTNA6NMZ2 147 aa17.89■□□□□ 0.46
SPAST-202ENST00000345662 TPBGLP0DKB5 382 aa17.89■□□□□ 0.46
SPAST-202ENST00000345662 ARP10275 920 aa17.89■□□□□ 0.46
SPAST-202ENST00000345662 DDR2Q16832 855 aa17.89■□□□□ 0.46
SPAST-202ENST00000345662 LIN52Q52LA3 116 aa17.89■□□□□ 0.46
SPAST-202ENST00000345662 TMEM26Q6ZUK4 368 aa17.89■□□□□ 0.46
SPAST-202ENST00000345662 DGCR6LQ9BY27 220 aa17.89■□□□□ 0.46
SPAST-202ENST00000345662 PNPLA3Q9NST1 481 aa17.89■□□□□ 0.46
SPAST-202ENST00000345662 TUBA8Q9NY65 449 aaPredicted RBP17.89■□□□□ 0.46
SPAST-202ENST00000345662 WWOXQ9NZC7 414 aa17.89■□□□□ 0.46
SPAST-202ENST00000345662 ZC3H13Q5T200 1668 aaKnown RBP17.89■□□□□ 0.46
SPAST-202ENST00000345662 FAM95CA0A1B0GW59 222 aa17.89■□□□□ 0.45
SPAST-202ENST00000345662 APOC4-APOC2K7ER74 178 aa17.89■□□□□ 0.45
SPAST-202ENST00000345662 APOC2P02655 101 aa17.89■□□□□ 0.45
SPAST-202ENST00000345662 TXNP10599 105 aaKnown RBP17.89■□□□□ 0.45
SPAST-202ENST00000345662 CDH3P22223 829 aa17.89■□□□□ 0.45
SPAST-202ENST00000345662 PRIM2P49643 509 aa17.89■□□□□ 0.45
SPAST-202ENST00000345662 RPL14P50914 215 aaKnown RBP17.89■□□□□ 0.45
SPAST-202ENST00000345662 TKFCQ3LXA3 575 aa17.89■□□□□ 0.45
SPAST-202ENST00000345662 SV2CQ496J9 727 aa17.89■□□□□ 0.45
SPAST-202ENST00000345662 ZRANB3Q5FWF4 1079 aa17.89■□□□□ 0.45
SPAST-202ENST00000345662 FAM45BPQ6NSW5 357 aa17.89■□□□□ 0.45
SPAST-202ENST00000345662 TRABD2AQ86V40 505 aa17.89■□□□□ 0.45
SPAST-202ENST00000345662 APOL4Q9BPW4 351 aa17.89■□□□□ 0.45
SPAST-202ENST00000345662 SH3GLB1Q9Y371 365 aa17.89■□□□□ 0.45
SPAST-202ENST00000345662 STX7O15400 261 aaKnown RBP17.89■□□□□ 0.45
SPAST-202ENST00000345662 GSC2O15499 205 aa17.89■□□□□ 0.45
SPAST-202ENST00000345662 TSHRP16473 764 aa17.89■□□□□ 0.45
SPAST-202ENST00000345662 PPATQ06203 517 aa17.89■□□□□ 0.45
SPAST-202ENST00000345662 UMODL1Q5DID0 1318 aa17.89■□□□□ 0.45
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms