RNA–Protein interactions for RNA: ENST00000343765.6

VIPAS39-202, Transcript of VPS33B interacting protein, apical-basolateral polarity regulator, spe-39 homolog, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VIPAS39, Length 2,761 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VIPAS39-202ENST00000343765 ARL4AP40617 200 aa15.4■□□□□ 0.06
VIPAS39-202ENST00000343765 SKIV2L2P42285 1042 aaKnown RBP15.4■□□□□ 0.06
VIPAS39-202ENST00000343765 SERPINB4P48594 390 aa15.4■□□□□ 0.06
VIPAS39-202ENST00000343765 SLC18A2Q05940 514 aa15.4■□□□□ 0.06
VIPAS39-202ENST00000343765 ACCSLQ4AC99 568 aa15.4■□□□□ 0.06
VIPAS39-202ENST00000343765 UBXN11Q5T124 520 aa15.4■□□□□ 0.06
VIPAS39-202ENST00000343765 TWF2Q6IBS0 349 aaKnown RBP15.4■□□□□ 0.06
VIPAS39-202ENST00000343765 SH2D5Q6ZV89 423 aa15.4■□□□□ 0.06
VIPAS39-202ENST00000343765 PCMTD2Q9NV79 361 aa15.4■□□□□ 0.06
VIPAS39-202ENST00000343765 SLC45A1Q9Y2W3 748 aa15.4■□□□□ 0.06
VIPAS39-202ENST00000343765 IPPQ9Y573 584 aa15.4■□□□□ 0.06
VIPAS39-202ENST00000343765 MBLAC1A4D2B0 266 aaPredicted RBP15.39■□□□□ 0.05
VIPAS39-202ENST00000343765 DCAF8L1A6NGE4 600 aa15.39■□□□□ 0.05
VIPAS39-202ENST00000343765 TOP3BO95985 862 aaKnown RBP15.39■□□□□ 0.05
VIPAS39-202ENST00000343765 T-ENOLP0DO92 83 aa15.39■□□□□ 0.05
VIPAS39-202ENST00000343765 ZFXP17010 805 aaPredicted RBP15.39■□□□□ 0.05
VIPAS39-202ENST00000343765 AP1B1Q10567 949 aa15.39■□□□□ 0.05
VIPAS39-202ENST00000343765 RIPK1Q13546 671 aa15.39■□□□□ 0.05
VIPAS39-202ENST00000343765 CCL14Q16627 93 aa15.39■□□□□ 0.05
VIPAS39-202ENST00000343765 FAM110CQ1W6H9 321 aa15.39■□□□□ 0.05
VIPAS39-202ENST00000343765 ARMC2Q8NEN0 867 aa15.39■□□□□ 0.05
VIPAS39-202ENST00000343765 TFB1MQ8WVM0 346 aaKnown RBP15.39■□□□□ 0.05
VIPAS39-202ENST00000343765 MED10Q9BTT4 135 aa15.39■□□□□ 0.05
VIPAS39-202ENST00000343765 TRIM55Q9BYV6 548 aa15.39■□□□□ 0.05
VIPAS39-202ENST00000343765 PNPLA8Q9NP80 782 aa15.39■□□□□ 0.05
VIPAS39-202ENST00000343765 GCATO75600 419 aa15.39■□□□□ 0.05
VIPAS39-202ENST00000343765 MATKP42679 507 aa15.39■□□□□ 0.05
VIPAS39-202ENST00000343765 PSEN2P49810 448 aa15.39■□□□□ 0.05
VIPAS39-202ENST00000343765 LILRA4P59901 499 aa15.39■□□□□ 0.05
VIPAS39-202ENST00000343765 WSCD1Q658N2 575 aa15.39■□□□□ 0.05
VIPAS39-202ENST00000343765 CCNYQ8ND76 341 aa15.39■□□□□ 0.05
VIPAS39-202ENST00000343765 ADAM32Q8TC27 787 aa15.39■□□□□ 0.05
VIPAS39-202ENST00000343765 DEPDC1BQ8WUY9 529 aa15.39■□□□□ 0.05
VIPAS39-202ENST00000343765 HTR3CQ8WXA8 447 aa15.39■□□□□ 0.05
VIPAS39-202ENST00000343765 SIGLEC10Q96LC7 697 aa15.39■□□□□ 0.05
VIPAS39-202ENST00000343765 NCAPGQ9BPX3 1015 aa15.39■□□□□ 0.05
VIPAS39-202ENST00000343765 FRMD8Q9BZ67 464 aaPredicted RBP15.39■□□□□ 0.05
VIPAS39-202ENST00000343765 FBXO6Q9NRD1 293 aaPredicted RBP15.39■□□□□ 0.05
VIPAS39-202ENST00000343765 GNEQ9Y223 722 aaKnown RBP15.39■□□□□ 0.05
VIPAS39-202ENST00000343765 WDR27A2RRH5 827 aa15.38■□□□□ 0.05
VIPAS39-202ENST00000343765 MEIS3P2A8K0S8 358 aa15.38■□□□□ 0.05
VIPAS39-202ENST00000343765 C2CD2LO14523 706 aa15.38■□□□□ 0.05
VIPAS39-202ENST00000343765 DHRS4L1P0CG22 281 aa15.38■□□□□ 0.05
VIPAS39-202ENST00000343765 PRKCHP24723 683 aa15.38■□□□□ 0.05
VIPAS39-202ENST00000343765 ACADSBP45954 432 aa15.38■□□□□ 0.05
VIPAS39-202ENST00000343765 SESN2P58004 480 aaPredicted RBP15.38■□□□□ 0.05
VIPAS39-202ENST00000343765 SV2CQ496J9 727 aa15.38■□□□□ 0.05
VIPAS39-202ENST00000343765 NME8Q8N427 588 aa15.38■□□□□ 0.05
VIPAS39-202ENST00000343765 MAGEC3Q8TD91 643 aa15.38■□□□□ 0.05
VIPAS39-202ENST00000343765 TNIP3Q96KP6 325 aa15.38■□□□□ 0.05
VIPAS39-202ENST00000343765 EBNA1BP2Q99848 306 aaKnown RBP15.38■□□□□ 0.05
VIPAS39-202ENST00000343765 LRMDAQ9H2I8 198 aa15.38■□□□□ 0.05
VIPAS39-202ENST00000343765 ARHGEF4Q9NR80 690 aa15.38■□□□□ 0.05
VIPAS39-202ENST00000343765 GDAP2Q9NXN4 497 aa15.38■□□□□ 0.05
VIPAS39-202ENST00000343765 HEY2Q9UBP5 337 aa15.38■□□□□ 0.05
VIPAS39-202ENST00000343765 MYO18AQ92614 2054 aaKnown RBP15.38■□□□□ 0.05
VIPAS39-202ENST00000343765 CYB561D2O14569 222 aa15.38■□□□□ 0.05
VIPAS39-202ENST00000343765 RARBP10826 455 aa15.38■□□□□ 0.05
VIPAS39-202ENST00000343765 MAGEA6P43360 314 aa15.38■□□□□ 0.05
VIPAS39-202ENST00000343765 NR2C2P49116 596 aa15.38■□□□□ 0.05
VIPAS39-202ENST00000343765 IRX4P78413 519 aa15.38■□□□□ 0.05
VIPAS39-202ENST00000343765 CDC42EP1Q00587 391 aa15.38■□□□□ 0.05
VIPAS39-202ENST00000343765 ZBTB16Q05516 673 aa15.38■□□□□ 0.05
VIPAS39-202ENST00000343765 MDH1BQ5I0G3 518 aa15.38■□□□□ 0.05
VIPAS39-202ENST00000343765 EFHC1Q5JVL4 640 aa15.38■□□□□ 0.05
VIPAS39-202ENST00000343765 ANKRD20A2Q5SQ80 823 aa15.38■□□□□ 0.05
VIPAS39-202ENST00000343765 ANKRD20A1Q5TYW2 823 aa15.38■□□□□ 0.05
VIPAS39-202ENST00000343765 ANKRD20A3Q5VUR7 823 aa15.38■□□□□ 0.05
VIPAS39-202ENST00000343765 CTU1Q7Z7A3 348 aaKnown RBP15.38■□□□□ 0.05
VIPAS39-202ENST00000343765 CLNKQ7Z7G1 428 aa15.38■□□□□ 0.05
VIPAS39-202ENST00000343765 TP53INP2Q8IXH6 220 aa15.38■□□□□ 0.05
VIPAS39-202ENST00000343765 PDCD7Q8N8D1 485 aaKnown RBP15.38■□□□□ 0.05
VIPAS39-202ENST00000343765 SMG8Q8ND04 991 aaKnown RBP15.38■□□□□ 0.05
VIPAS39-202ENST00000343765 MCUQ8NE86 351 aa15.38■□□□□ 0.05
VIPAS39-202ENST00000343765 GSDMBQ8TAX9 411 aa15.38■□□□□ 0.05
VIPAS39-202ENST00000343765 PRR11Q96HE9 360 aaPredicted RBP15.38■□□□□ 0.05
VIPAS39-202ENST00000343765 RAB3IPQ96QF0 476 aaPredicted RBP15.38■□□□□ 0.05
VIPAS39-202ENST00000343765 FZD10Q9ULW2 581 aa15.38■□□□□ 0.05
VIPAS39-202ENST00000343765 TRIP12Q14669 1992 aaPredicted RBP15.38■□□□□ 0.05
VIPAS39-202ENST00000343765 RALGAPA2Q2PPJ7 1873 aa15.37■□□□□ 0.05
VIPAS39-202ENST00000343765 IQCA1LA6NCM1 817 aa15.37■□□□□ 0.05
VIPAS39-202ENST00000343765 M0QYT0 321 aa15.37■□□□□ 0.05
VIPAS39-202ENST00000343765 XPO1O14980 1071 aaKnown RBP15.37■□□□□ 0.05
VIPAS39-202ENST00000343765 XPOTO43592 962 aaKnown RBP15.37■□□□□ 0.05
VIPAS39-202ENST00000343765 EPHB2P29323 1055 aa15.37■□□□□ 0.05
VIPAS39-202ENST00000343765 PNPLA4P41247 253 aa15.37■□□□□ 0.05
VIPAS39-202ENST00000343765 ARFIP2P53365 341 aa15.37■□□□□ 0.05
VIPAS39-202ENST00000343765 MAP3K7CLP57077 242 aa15.37■□□□□ 0.05
VIPAS39-202ENST00000343765 MRPS5P82675 430 aaKnown RBP15.37■□□□□ 0.05
VIPAS39-202ENST00000343765 WLSQ5T9L3 541 aa15.37■□□□□ 0.05
VIPAS39-202ENST00000343765 SYPL2Q5VXT5 272 aa15.37■□□□□ 0.05
VIPAS39-202ENST00000343765 HFE2Q6ZVN8 426 aa15.37■□□□□ 0.05
VIPAS39-202ENST00000343765 COLGALT1Q8NBJ5 622 aa15.37■□□□□ 0.05
VIPAS39-202ENST00000343765 FBXO41Q8TF61 875 aa15.37■□□□□ 0.05
VIPAS39-202ENST00000343765 HSFY1Q96LI6 401 aa15.37■□□□□ 0.05
VIPAS39-202ENST00000343765 TMEM120AQ9BXJ8 343 aa15.37■□□□□ 0.05
VIPAS39-202ENST00000343765 ZNF395Q9H8N7 513 aaPredicted RBP15.37■□□□□ 0.05
VIPAS39-202ENST00000343765 LRRC4Q9HBW1 653 aa15.37■□□□□ 0.05
VIPAS39-202ENST00000343765 IL1RAPL1Q9NZN1 696 aa15.37■□□□□ 0.05
VIPAS39-202ENST00000343765 TIMM13Q9Y5L4 95 aaPredicted RBP15.37■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms