RNA–Protein interactions for RNA: ENST00000343483.6

HOXA9-201, Transcript of homeobox A9, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HOXA9, Length 2,060 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HOXA9-201ENST00000343483 LGALS13Q9UHV8 139 aa19.28■□□□□ 0.68
HOXA9-201ENST00000343483 CFAP69A5D8W1 941 aa19.28■□□□□ 0.68
HOXA9-201ENST00000343483 FOXO6A8MYZ6 492 aa19.28■□□□□ 0.68
HOXA9-201ENST00000343483 HHLA1C9JL84 531 aa19.28■□□□□ 0.68
HOXA9-201ENST00000343483 ALOX15BO15296 676 aa19.28■□□□□ 0.68
HOXA9-201ENST00000343483 B4GALT3O60512 393 aa19.28■□□□□ 0.68
HOXA9-201ENST00000343483 CDH16O75309 829 aa19.28■□□□□ 0.68
HOXA9-201ENST00000343483 EOMESO95936 686 aa19.28■□□□□ 0.68
HOXA9-201ENST00000343483 AMPD1P23109 780 aa19.28■□□□□ 0.68
HOXA9-201ENST00000343483 CLLU1OSQ5K130 101 aa19.28■□□□□ 0.68
HOXA9-201ENST00000343483 FAM171BQ6P995 826 aa19.28■□□□□ 0.68
HOXA9-201ENST00000343483 LRRC34Q8IZ02 419 aa19.28■□□□□ 0.68
HOXA9-201ENST00000343483 THEM5Q8N1Q8 247 aa19.28■□□□□ 0.68
HOXA9-201ENST00000343483 MGARPQ8TDB4 240 aa19.28■□□□□ 0.68
HOXA9-201ENST00000343483 DYDC1Q8WWB3 177 aa19.28■□□□□ 0.68
HOXA9-201ENST00000343483 SUSD3Q96L08 255 aa19.28■□□□□ 0.68
HOXA9-201ENST00000343483 KCNK9Q9NPC2 374 aa19.28■□□□□ 0.68
HOXA9-201ENST00000343483 BCLAF3A2AJT9 711 aaKnown RBP19.27■□□□□ 0.68
HOXA9-201ENST00000343483 KBTBD13C9JR72 458 aa19.27■□□□□ 0.68
HOXA9-201ENST00000343483 ARVCFO00192 962 aa19.27■□□□□ 0.68
HOXA9-201ENST00000343483 SLC10A2Q12908 348 aaPredicted RBP19.27■□□□□ 0.68
HOXA9-201ENST00000343483 TTC31Q49AM3 519 aaPredicted RBP19.27■□□□□ 0.68
HOXA9-201ENST00000343483 MSS51Q4VC12 460 aa19.27■□□□□ 0.68
HOXA9-201ENST00000343483 VSTM1Q6UX27 236 aa19.27■□□□□ 0.68
HOXA9-201ENST00000343483 BNIPLQ7Z465 357 aa19.27■□□□□ 0.68
HOXA9-201ENST00000343483 LRRTM3Q86VH5 581 aa19.27■□□□□ 0.68
HOXA9-201ENST00000343483 CDKL3Q8IVW4 592 aaPredicted RBP19.27■□□□□ 0.68
HOXA9-201ENST00000343483 CYP4X1Q8N118 509 aa19.27■□□□□ 0.68
HOXA9-201ENST00000343483 CSNK1G1Q9HCP0 422 aa19.27■□□□□ 0.68
HOXA9-201ENST00000343483 RAB6BQ9NRW1 208 aa19.27■□□□□ 0.68
HOXA9-201ENST00000343483 PAK5Q9P286 719 aa19.27■□□□□ 0.68
HOXA9-201ENST00000343483 MFHAS1Q9Y4C4 1052 aa19.27■□□□□ 0.68
HOXA9-201ENST00000343483 EXOC1LA0A1B0GW35 172 aa19.26■□□□□ 0.67
HOXA9-201ENST00000343483 INPPL1O15357 1258 aa19.26■□□□□ 0.67
HOXA9-201ENST00000343483 DDHD2O94830 711 aa19.26■□□□□ 0.67
HOXA9-201ENST00000343483 LTFP02788 710 aa19.26■□□□□ 0.67
HOXA9-201ENST00000343483 VIMP08670 466 aaKnown RBP19.26■□□□□ 0.67
HOXA9-201ENST00000343483 PAX3P23760 479 aa19.26■□□□□ 0.67
HOXA9-201ENST00000343483 TSPY1Q01534 308 aa19.26■□□□□ 0.67
HOXA9-201ENST00000343483 RNASELQ05823 741 aaKnown RBP19.26■□□□□ 0.67
HOXA9-201ENST00000343483 LRRC14Q15048 493 aa19.26■□□□□ 0.67
HOXA9-201ENST00000343483 NOMO2Q5JPE7 1267 aa19.26■□□□□ 0.67
HOXA9-201ENST00000343483 NCBP2-AS2Q69YL0 99 aa19.26■□□□□ 0.67
HOXA9-201ENST00000343483 PSTKQ8IV42 348 aaKnown RBP19.26■□□□□ 0.67
HOXA9-201ENST00000343483 URGCPQ8TCY9 931 aa19.26■□□□□ 0.67
HOXA9-201ENST00000343483 EDEM1Q92611 657 aa19.26■□□□□ 0.67
HOXA9-201ENST00000343483 RTP4Q96DX8 246 aa19.26■□□□□ 0.67
HOXA9-201ENST00000343483 DMAP1Q9NPF5 467 aaPredicted RBP19.26■□□□□ 0.67
HOXA9-201ENST00000343483 ETNK2Q9NVF9 386 aa19.26■□□□□ 0.67
HOXA9-201ENST00000343483 USP3Q9Y6I4 520 aa19.26■□□□□ 0.67
HOXA9-201ENST00000343483 TRBV21OR9-2A0A075B6F4 123 aaPredicted RBP19.26■□□□□ 0.67
HOXA9-201ENST00000343483 ARHGEF37A1IGU5 675 aa19.26■□□□□ 0.67
HOXA9-201ENST00000343483 SMAPO00193 183 aa19.26■□□□□ 0.67
HOXA9-201ENST00000343483 CREB3O43889 395 aa19.26■□□□□ 0.67
HOXA9-201ENST00000343483 BRAFP15056 766 aa19.26■□□□□ 0.67
HOXA9-201ENST00000343483 NR2C2P49116 596 aa19.26■□□□□ 0.67
HOXA9-201ENST00000343483 YWHAHQ04917 246 aaPredicted RBP19.26■□□□□ 0.67
HOXA9-201ENST00000343483 EFHC2Q5JST6 749 aa19.26■□□□□ 0.67
HOXA9-201ENST00000343483 LRRC8DQ7L1W4 858 aa19.26■□□□□ 0.67
HOXA9-201ENST00000343483 PDIK1LQ8N165 341 aa19.26■□□□□ 0.67
HOXA9-201ENST00000343483 ANKRD42Q8N9B4 389 aa19.26■□□□□ 0.67
HOXA9-201ENST00000343483 CCDC197Q8NCU1 140 aa19.26■□□□□ 0.67
HOXA9-201ENST00000343483 PYROXD1Q8WU10 500 aa19.26■□□□□ 0.67
HOXA9-201ENST00000343483 RNF139Q8WU17 664 aa19.26■□□□□ 0.67
HOXA9-201ENST00000343483 PKMYT1Q99640 499 aa19.26■□□□□ 0.67
HOXA9-201ENST00000343483 GOLGA6L7A0A1B0GV03 622 aa19.25■□□□□ 0.67
HOXA9-201ENST00000343483 FSBPO95073 299 aa19.25■□□□□ 0.67
HOXA9-201ENST00000343483 BBS9Q3SYG4 887 aa19.25■□□□□ 0.67
HOXA9-201ENST00000343483 SLC45A4Q5BKX6 768 aa19.25■□□□□ 0.67
HOXA9-201ENST00000343483 TAX1BP1Q86VP1 789 aa19.25■□□□□ 0.67
HOXA9-201ENST00000343483 CCDC110Q8TBZ0 833 aa19.25■□□□□ 0.67
HOXA9-201ENST00000343483 RNF208Q9H0X6 261 aa19.25■□□□□ 0.67
HOXA9-201ENST00000343483 ARHGEF4Q9NR80 690 aa19.25■□□□□ 0.67
HOXA9-201ENST00000343483 DDIT4Q9NX09 232 aa19.25■□□□□ 0.67
HOXA9-201ENST00000343483 DTLQ9NZJ0 730 aa19.25■□□□□ 0.67
HOXA9-201ENST00000343483 RCOR3Q9P2K3 495 aaPredicted RBP19.25■□□□□ 0.67
HOXA9-201ENST00000343483 CAPN7Q9Y6W3 813 aa19.25■□□□□ 0.67
HOXA9-201ENST00000343483 TDRD15B5MCY1 1934 aaKnown RBP19.25■□□□□ 0.67
HOXA9-201ENST00000343483 H3BRJ5 948 aa19.24■□□□□ 0.67
HOXA9-201ENST00000343483 CCL5P13501 91 aa19.24■□□□□ 0.67
HOXA9-201ENST00000343483 OR1G1P47890 313 aa19.24■□□□□ 0.67
HOXA9-201ENST00000343483 MAPRE1Q15691 268 aaKnown RBP19.24■□□□□ 0.67
HOXA9-201ENST00000343483 FAXCQ5TGI0 409 aa19.24■□□□□ 0.67
HOXA9-201ENST00000343483 KCNT2Q6UVM3 1135 aa19.24■□□□□ 0.67
HOXA9-201ENST00000343483 PACS2Q86VP3 889 aa19.24■□□□□ 0.67
HOXA9-201ENST00000343483 RIBC1Q8N443 379 aaPredicted RBP19.24■□□□□ 0.67
HOXA9-201ENST00000343483 PHACTR1Q9C0D0 580 aa19.24■□□□□ 0.67
HOXA9-201ENST00000343483 NSRP1Q9H0G5 558 aaKnown RBP19.24■□□□□ 0.67
HOXA9-201ENST00000343483 SAMD15Q9P1V8 674 aa19.24■□□□□ 0.67
HOXA9-201ENST00000343483 PCDHB8Q9UN66 801 aa19.24■□□□□ 0.67
HOXA9-201ENST00000343483 PHF24Q9UPV7 400 aa19.24■□□□□ 0.67
HOXA9-201ENST00000343483 PRG3Q9Y2Y8 225 aaPredicted RBP19.24■□□□□ 0.67
HOXA9-201ENST00000343483 SELPP16109 830 aa19.24■□□□□ 0.67
HOXA9-201ENST00000343483 TYMPP19971 482 aa19.24■□□□□ 0.67
HOXA9-201ENST00000343483 FAM189BP81408 668 aa19.24■□□□□ 0.67
HOXA9-201ENST00000343483 DSC1Q08554 894 aa19.24■□□□□ 0.67
HOXA9-201ENST00000343483 XRCC4Q13426 336 aa19.24■□□□□ 0.67
HOXA9-201ENST00000343483 KCNJ11Q14654 390 aa19.24■□□□□ 0.67
HOXA9-201ENST00000343483 TMED2Q15363 201 aa19.24■□□□□ 0.67
HOXA9-201ENST00000343483 BHLHA9Q7RTU4 235 aa19.24■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms