RNA–Protein interactions for RNA: ENST00000343090.10

UBE4B-202, Transcript of ubiquitination factor E4B, humanhuman

TSL 1 (best) BASIC

Gene UBE4B, Length 5,267 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE4B-202ENST00000343090 RRP1BQ14684 758 aaKnown RBP8.29□□□□□ -1.08
UBE4B-202ENST00000343090 LINC00523Q86TU6 105 aa8.29□□□□□ -1.08
UBE4B-202ENST00000343090 FITM2Q8N6M3 262 aa8.29□□□□□ -1.08
UBE4B-202ENST00000343090 CERKQ8TCT0 537 aa8.29□□□□□ -1.08
UBE4B-202ENST00000343090 ZNF75CPQ92670 426 aaPredicted RBP8.29□□□□□ -1.08
UBE4B-202ENST00000343090 SEMA4DQ92854 862 aa8.29□□□□□ -1.08
UBE4B-202ENST00000343090 SRPK1Q96SB4 655 aaKnown RBP8.29□□□□□ -1.08
UBE4B-202ENST00000343090 KIAA1257Q9ULG3 409 aa8.29□□□□□ -1.08
UBE4B-202ENST00000343090 CASTOR2A6NHX0 329 aa8.29□□□□□ -1.08
UBE4B-202ENST00000343090 KCNK1O00180 336 aa8.29□□□□□ -1.08
UBE4B-202ENST00000343090 SKIV2L2P42285 1042 aaKnown RBP8.29□□□□□ -1.08
UBE4B-202ENST00000343090 CSHL1Q14406 222 aa8.29□□□□□ -1.08
UBE4B-202ENST00000343090 POU6F1Q14863 301 aa8.29□□□□□ -1.08
UBE4B-202ENST00000343090 LLGL2Q6P1M3 1020 aa8.29□□□□□ -1.08
UBE4B-202ENST00000343090 TDRD5Q8NAT2 981 aaKnown RBP8.29□□□□□ -1.08
UBE4B-202ENST00000343090 SERBP1Q8NC51 408 aaKnown RBP eCLIP8.29□□□□□ -1.08
UBE4B-202ENST00000343090 ETNPPLQ8TBG4 499 aa8.29□□□□□ -1.08
UBE4B-202ENST00000343090 TUBGCP3Q96CW5 907 aa8.29□□□□□ -1.08
UBE4B-202ENST00000343090 DCUN1D1Q96GG9 259 aa8.29□□□□□ -1.08
UBE4B-202ENST00000343090 ZNF180Q9UJW8 692 aa8.29□□□□□ -1.08
UBE4B-202ENST00000343090 ITGB1BP2Q9UKP3 347 aa8.29□□□□□ -1.08
UBE4B-202ENST00000343090 BARX2Q9UMQ3 279 aaPredicted RBP8.29□□□□□ -1.08
UBE4B-202ENST00000343090 ATRNO75882 1429 aa8.29□□□□□ -1.08
UBE4B-202ENST00000343090 E5RJQ4 531 aa8.28□□□□□ -1.08
UBE4B-202ENST00000343090 SPTLC1O15269 473 aa8.28□□□□□ -1.08
UBE4B-202ENST00000343090 TGFB1I1O43294 461 aa8.28□□□□□ -1.08
UBE4B-202ENST00000343090 USP12O75317 370 aa8.28□□□□□ -1.08
UBE4B-202ENST00000343090 HMGCRP04035 888 aa8.28□□□□□ -1.08
UBE4B-202ENST00000343090 CETPP11597 493 aa8.28□□□□□ -1.08
UBE4B-202ENST00000343090 ADIGQ0VDE8 80 aa8.28□□□□□ -1.08
UBE4B-202ENST00000343090 MAMLD1Q13495 774 aa8.28□□□□□ -1.08
UBE4B-202ENST00000343090 C15orf59Q2T9L4 293 aaPredicted RBP8.28□□□□□ -1.08
UBE4B-202ENST00000343090 TCHHL1Q5QJ38 904 aaPredicted RBP8.28□□□□□ -1.08
UBE4B-202ENST00000343090 ANO7Q6IWH7 933 aa8.28□□□□□ -1.08
UBE4B-202ENST00000343090 CCNJLQ8IV13 435 aa8.28□□□□□ -1.08
UBE4B-202ENST00000343090 SNX31Q8N9S9 440 aa8.28□□□□□ -1.08
UBE4B-202ENST00000343090 FAM162AQ96A26 154 aa8.28□□□□□ -1.08
UBE4B-202ENST00000343090 ECSITQ9BQ95 431 aa8.28□□□□□ -1.08
UBE4B-202ENST00000343090 DCUN1D5Q9BTE7 237 aa8.28□□□□□ -1.08
UBE4B-202ENST00000343090 GPR63Q9BZJ6 419 aa8.28□□□□□ -1.08
UBE4B-202ENST00000343090 NEUROG2Q9H2A3 272 aa8.28□□□□□ -1.08
UBE4B-202ENST00000343090 ZC4H2Q9NQZ6 224 aa8.28□□□□□ -1.08
UBE4B-202ENST00000343090 SNX13Q9Y5W8 968 aa8.28□□□□□ -1.08
UBE4B-202ENST00000343090 TRPC5OSA6NMA1 111 aa8.28□□□□□ -1.08
UBE4B-202ENST00000343090 DAB1O75553 588 aa8.28□□□□□ -1.08
UBE4B-202ENST00000343090 RBL1P28749 1068 aa8.28□□□□□ -1.08
UBE4B-202ENST00000343090 FMO1Q01740 532 aa8.28□□□□□ -1.08
UBE4B-202ENST00000343090 RAD51Q06609 339 aa8.28□□□□□ -1.08
UBE4B-202ENST00000343090 BST2Q10589 180 aaKnown RBP8.28□□□□□ -1.08
UBE4B-202ENST00000343090 GALNTL6Q49A17 601 aa8.28□□□□□ -1.08
UBE4B-202ENST00000343090 SEL1L3Q68CR1 1132 aa8.28□□□□□ -1.08
UBE4B-202ENST00000343090 EXOC3L1Q86VI1 746 aa8.28□□□□□ -1.08
UBE4B-202ENST00000343090 DCP1BQ8IZD4 617 aaKnown RBP8.28□□□□□ -1.08
UBE4B-202ENST00000343090 DEFB107AQ8IZN7 70 aa8.28□□□□□ -1.08
UBE4B-202ENST00000343090 RNF148Q8N7C7 305 aa8.28□□□□□ -1.08
UBE4B-202ENST00000343090 SH3TC2Q8TF17 1288 aa8.28□□□□□ -1.08
UBE4B-202ENST00000343090 DIS3LQ8TF46 1054 aaKnown RBP8.28□□□□□ -1.08
UBE4B-202ENST00000343090 ZC3H15Q8WU90 426 aaKnown RBP8.28□□□□□ -1.08
UBE4B-202ENST00000343090 ZFRQ96KR1 1074 aaKnown RBP8.28□□□□□ -1.08
UBE4B-202ENST00000343090 LRMDAQ9H2I8 198 aa8.28□□□□□ -1.08
UBE4B-202ENST00000343090 PTPRHQ9HD43 1115 aa8.28□□□□□ -1.08
UBE4B-202ENST00000343090 AVENQ9NQS1 362 aaPredicted RBP8.28□□□□□ -1.08
UBE4B-202ENST00000343090 PCDHGB4Q9UN71 923 aa8.28□□□□□ -1.08
UBE4B-202ENST00000343090 STARD13Q9Y3M8 1113 aa8.28□□□□□ -1.08
UBE4B-202ENST00000343090 CYP3A7-CYP3A51PA0A087WV96 503 aa8.28□□□□□ -1.08
UBE4B-202ENST00000343090 H3BRB1 525 aa8.28□□□□□ -1.08
UBE4B-202ENST00000343090 DPYSL4O14531 572 aa8.28□□□□□ -1.08
UBE4B-202ENST00000343090 FKBP9O95302 570 aa8.28□□□□□ -1.08
UBE4B-202ENST00000343090 NUDT17P0C025 328 aa8.28□□□□□ -1.08
UBE4B-202ENST00000343090 HIST1H2AGP0C0S8 130 aaPredicted RBP8.28□□□□□ -1.08
UBE4B-202ENST00000343090 FAM58BPP0C7Q3 252 aa8.28□□□□□ -1.08
UBE4B-202ENST00000343090 ODC1P11926 461 aa8.28□□□□□ -1.08
UBE4B-202ENST00000343090 CCDC130P13994 396 aa8.28□□□□□ -1.08
UBE4B-202ENST00000343090 HIST1H2ADP20671 130 aa8.28□□□□□ -1.08
UBE4B-202ENST00000343090 CYP3A7P24462 503 aa8.28□□□□□ -1.08
UBE4B-202ENST00000343090 CHN2P52757 468 aa8.28□□□□□ -1.08
UBE4B-202ENST00000343090 MPP3Q13368 585 aa8.28□□□□□ -1.08
UBE4B-202ENST00000343090 ACAP1Q15027 740 aa8.28□□□□□ -1.08
UBE4B-202ENST00000343090 INAQ16352 499 aa8.28□□□□□ -1.08
UBE4B-202ENST00000343090 UGCGQ16739 394 aa8.28□□□□□ -1.08
UBE4B-202ENST00000343090 SLC5A9Q2M3M2 681 aa8.28□□□□□ -1.08
UBE4B-202ENST00000343090 C16orf46Q6P387 395 aa8.28□□□□□ -1.08
UBE4B-202ENST00000343090 FKBP9P1Q75LS8 142 aa8.28□□□□□ -1.08
UBE4B-202ENST00000343090 FAM83AQ86UY5 434 aa8.28□□□□□ -1.08
UBE4B-202ENST00000343090 TMPRSS6Q8IU80 811 aa8.28□□□□□ -1.08
UBE4B-202ENST00000343090 BRSK2Q8IWQ3 736 aa8.28□□□□□ -1.08
UBE4B-202ENST00000343090 UNC45BQ8IWX7 931 aa8.28□□□□□ -1.08
UBE4B-202ENST00000343090 ZCCHC9Q8N567 271 aaKnown RBP8.28□□□□□ -1.08
UBE4B-202ENST00000343090 TMCO5AQ8N6Q1 288 aa8.28□□□□□ -1.08
UBE4B-202ENST00000343090 ZNF555Q8NEP9 628 aa8.28□□□□□ -1.08
UBE4B-202ENST00000343090 ALG3Q92685 438 aa8.28□□□□□ -1.08
UBE4B-202ENST00000343090 MKL1Q969V6 931 aa8.28□□□□□ -1.08
UBE4B-202ENST00000343090 ABHD8Q96I13 439 aa8.28□□□□□ -1.08
UBE4B-202ENST00000343090 HIST1H2AHQ96KK5 128 aa8.28□□□□□ -1.08
UBE4B-202ENST00000343090 INPP4AQ96PE3 977 aaPredicted RBP8.28□□□□□ -1.08
UBE4B-202ENST00000343090 HIST1H2AJQ99878 128 aa8.28□□□□□ -1.08
UBE4B-202ENST00000343090 H2AFJQ9BTM1 129 aa8.28□□□□□ -1.08
UBE4B-202ENST00000343090 PIF1Q9H611 641 aa8.28□□□□□ -1.08
UBE4B-202ENST00000343090 TUT1Q9H6E5 874 aaKnown RBP8.28□□□□□ -1.08
UBE4B-202ENST00000343090 VANGL2Q9ULK5 521 aa8.28□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms