RNA–Protein interactions for RNA: ENST00000342503.8

RTN1-202, Transcript of reticulon 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene RTN1, Length 1,703 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTN1-202ENST00000342503 SLC5A3P53794 718 aa20.72■□□□□ 0.91
RTN1-202ENST00000342503 BASP1P80723 227 aaKnown RBP20.72■□□□□ 0.91
RTN1-202ENST00000342503 FAAP100Q0VG06 881 aa20.72■□□□□ 0.91
RTN1-202ENST00000342503 IFRD2Q12894 506 aaPredicted RBP20.72■□□□□ 0.91
RTN1-202ENST00000342503 GLIPR1L2Q4G1C9 344 aa20.72■□□□□ 0.91
RTN1-202ENST00000342503 FAM43BQ6ZT52 329 aaPredicted RBP20.72■□□□□ 0.91
RTN1-202ENST00000342503 CENPUQ71F23 418 aa20.72■□□□□ 0.91
RTN1-202ENST00000342503 CEP57Q86XR8 500 aa20.72■□□□□ 0.91
RTN1-202ENST00000342503 SCN4BQ8IWT1 228 aa20.72■□□□□ 0.91
RTN1-202ENST00000342503 CRIPAKQ8N1N5 446 aa20.72■□□□□ 0.91
RTN1-202ENST00000342503 PPP1R12CQ9BZL4 782 aa20.72■□□□□ 0.91
RTN1-202ENST00000342503 MARCH5Q9NX47 278 aa20.72■□□□□ 0.91
RTN1-202ENST00000342503 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP20.72■□□□□ 0.91
RTN1-202ENST00000342503 PAK5Q9P286 719 aa20.72■□□□□ 0.91
RTN1-202ENST00000342503 RGS16O15492 202 aaPredicted RBP20.71■□□□□ 0.91
RTN1-202ENST00000342503 TMEM63AO94886 807 aa20.71■□□□□ 0.91
RTN1-202ENST00000342503 F9P00740 461 aa20.71■□□□□ 0.91
RTN1-202ENST00000342503 AMHP03971 560 aa20.71■□□□□ 0.91
RTN1-202ENST00000342503 ALDH2P05091 517 aa20.71■□□□□ 0.91
RTN1-202ENST00000342503 MNX1P50219 401 aaPredicted RBP20.71■□□□□ 0.91
RTN1-202ENST00000342503 SCAPQ12770 1279 aa20.71■□□□□ 0.91
RTN1-202ENST00000342503 LONRF1Q17RB8 773 aa20.71■□□□□ 0.91
RTN1-202ENST00000342503 SLC45A4Q5BKX6 768 aa20.71■□□□□ 0.91
RTN1-202ENST00000342503 FAM171A1Q5VUB5 890 aa20.71■□□□□ 0.91
RTN1-202ENST00000342503 TAC4Q86UU9 113 aa20.71■□□□□ 0.91
RTN1-202ENST00000342503 CCDC33Q8N5R6 958 aa20.71■□□□□ 0.91
RTN1-202ENST00000342503 QKIQ96PU8 341 aaKnown RBP eCLIP20.71■□□□□ 0.91
RTN1-202ENST00000342503 GPR62Q9BZJ7 368 aa20.71■□□□□ 0.91
RTN1-202ENST00000342503 PRDM16Q9HAZ2 1276 aa20.71■□□□□ 0.91
RTN1-202ENST00000342503 DTLQ9NZJ0 730 aa20.71■□□□□ 0.91
RTN1-202ENST00000342503 MICAL3Q7RTP6 2002 aa20.7■□□□□ 0.91
RTN1-202ENST00000342503 TBKBP1A7MCY6 615 aa20.7■□□□□ 0.9
RTN1-202ENST00000342503 I6L893 689 aaPredicted RBP20.7■□□□□ 0.9
RTN1-202ENST00000342503 EEF2KO00418 725 aaKnown RBP20.7■□□□□ 0.9
RTN1-202ENST00000342503 ALOX15BO15296 676 aa20.7■□□□□ 0.9
RTN1-202ENST00000342503 HOXA2O43364 376 aa20.7■□□□□ 0.9
RTN1-202ENST00000342503 CYP2C18P33260 490 aa20.7■□□□□ 0.9
RTN1-202ENST00000342503 ACTN2P35609 894 aa20.7■□□□□ 0.9
RTN1-202ENST00000342503 PDIA2Q13087 525 aaKnown RBP20.7■□□□□ 0.9
RTN1-202ENST00000342503 AUHQ13825 339 aaKnown RBP20.7■□□□□ 0.9
RTN1-202ENST00000342503 MRPL58Q14197 206 aaKnown RBP20.7■□□□□ 0.9
RTN1-202ENST00000342503 FASTKD3Q14CZ7 662 aaKnown RBP20.7■□□□□ 0.9
RTN1-202ENST00000342503 HIF1AQ16665 826 aa20.7■□□□□ 0.9
RTN1-202ENST00000342503 TRIM60Q495X7 471 aa20.7■□□□□ 0.9
RTN1-202ENST00000342503 CTXN3Q4LDR2 81 aa20.7■□□□□ 0.9
RTN1-202ENST00000342503 HP1BP3Q5SSJ5 553 aaPredicted RBP20.7■□□□□ 0.9
RTN1-202ENST00000342503 KCNT2Q6UVM3 1135 aa20.7■□□□□ 0.9
RTN1-202ENST00000342503 XPO7Q9UIA9 1087 aaKnown RBP20.7■□□□□ 0.9
RTN1-202ENST00000342503 FAM72CH0Y354 149 aa20.7■□□□□ 0.9
RTN1-202ENST00000342503 SMAPO00193 183 aa20.7■□□□□ 0.9
RTN1-202ENST00000342503 MFSD11O43934 449 aa20.7■□□□□ 0.9
RTN1-202ENST00000342503 ABHD2P08910 425 aa20.7■□□□□ 0.9
RTN1-202ENST00000342503 CXCR3P49682 368 aa20.7■□□□□ 0.9
RTN1-202ENST00000342503 ARL4CP56559 192 aa20.7■□□□□ 0.9
RTN1-202ENST00000342503 YWHAGP61981 247 aaKnown RBP eCLIP20.7■□□□□ 0.9
RTN1-202ENST00000342503 PPP2R2AP63151 447 aa20.7■□□□□ 0.9
RTN1-202ENST00000342503 GNGT1P63211 74 aa20.7■□□□□ 0.9
RTN1-202ENST00000342503 TLE2Q04725 743 aa20.7■□□□□ 0.9
RTN1-202ENST00000342503 DPYSQ14117 519 aa20.7■□□□□ 0.9
RTN1-202ENST00000342503 NFE2Q16621 373 aaPredicted RBP20.7■□□□□ 0.9
RTN1-202ENST00000342503 ARL13BQ3SXY8 428 aa20.7■□□□□ 0.9
RTN1-202ENST00000342503 FNBP1LQ5T0N5 605 aa20.7■□□□□ 0.9
RTN1-202ENST00000342503 FAM72AQ5TYM5 149 aa20.7■□□□□ 0.9
RTN1-202ENST00000342503 TTC19Q6DKK2 380 aaPredicted RBP20.7■□□□□ 0.9
RTN1-202ENST00000342503 FAM72DQ6L9T8 149 aa20.7■□□□□ 0.9
RTN1-202ENST00000342503 RFX8Q6ZV50 586 aa20.7■□□□□ 0.9
RTN1-202ENST00000342503 BEND5Q7L4P6 421 aa20.7■□□□□ 0.9
RTN1-202ENST00000342503 DEFB128Q7Z7B8 93 aa20.7■□□□□ 0.9
RTN1-202ENST00000342503 FAM72BQ86X60 149 aa20.7■□□□□ 0.9
RTN1-202ENST00000342503 ZBED8Q8IZ13 594 aa20.7■□□□□ 0.9
RTN1-202ENST00000342503 ARFGAP2Q8N6H7 521 aa20.7■□□□□ 0.9
RTN1-202ENST00000342503 DQX1Q8TE96 717 aaKnown RBP20.7■□□□□ 0.9
RTN1-202ENST00000342503 B3GALT6Q96L58 329 aa20.7■□□□□ 0.9
RTN1-202ENST00000342503 TTC25Q96NG3 672 aa20.7■□□□□ 0.9
RTN1-202ENST00000342503 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.7■□□□□ 0.9
RTN1-202ENST00000342503 BANF1O75531 89 aa20.69■□□□□ 0.9
RTN1-202ENST00000342503 DGKIO75912 1065 aa20.69■□□□□ 0.9
RTN1-202ENST00000342503 FGFR3P22607 806 aa20.69■□□□□ 0.9
RTN1-202ENST00000342503 IFI35P80217 286 aaPredicted RBP20.69■□□□□ 0.9
RTN1-202ENST00000342503 KCNJ11Q14654 390 aa20.69■□□□□ 0.9
RTN1-202ENST00000342503 CCDC13Q8IYE1 715 aa20.69■□□□□ 0.9
RTN1-202ENST00000342503 FUBP3Q96I24 572 aaKnown RBP eCLIP20.69■□□□□ 0.9
RTN1-202ENST00000342503 OLFM3Q96PB7 478 aa20.69■□□□□ 0.9
RTN1-202ENST00000342503 TRIM62Q9BVG3 475 aa20.69■□□□□ 0.9
RTN1-202ENST00000342503 MRPL9Q9BYD2 267 aaKnown RBP20.69■□□□□ 0.9
RTN1-202ENST00000342503 PHACTR1Q9C0D0 580 aa20.69■□□□□ 0.9
RTN1-202ENST00000342503 WDCPQ9H6R7 721 aa20.69■□□□□ 0.9
RTN1-202ENST00000342503 PLXNA3P51805 1871 aa20.69■□□□□ 0.9
RTN1-202ENST00000342503 NT5C1B-RDH14C9J2C7 533 aa20.68■□□□□ 0.9
RTN1-202ENST00000342503 AGTP01019 485 aa20.68■□□□□ 0.9
RTN1-202ENST00000342503 GPR15P49685 360 aa20.68■□□□□ 0.9
RTN1-202ENST00000342503 IRAK1P51617 712 aa20.68■□□□□ 0.9
RTN1-202ENST00000342503 SEMA3BQ13214 749 aa20.68■□□□□ 0.9
RTN1-202ENST00000342503 MSS51Q4VC12 460 aa20.68■□□□□ 0.9
RTN1-202ENST00000342503 SDHAF4Q5VUM1 108 aa20.68■□□□□ 0.9
RTN1-202ENST00000342503 BTBD8Q5XKL5 378 aa20.68■□□□□ 0.9
RTN1-202ENST00000342503 MFSD5Q6N075 450 aa20.68■□□□□ 0.9
RTN1-202ENST00000342503 FUT10Q6P4F1 479 aa20.68■□□□□ 0.9
RTN1-202ENST00000342503 BZW1Q7L1Q6 419 aaKnown RBP20.68■□□□□ 0.9
RTN1-202ENST00000342503 ANKMY2Q8IV38 441 aa20.68■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms