RNA–Protein interactions for RNA: ENST00000340541.4

VAPA-201, Transcript of VAMP associated protein A, humanhuman

TSL 5 BASIC

Gene VAPA, Length 1,227 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPA-201ENST00000340541 SFMBT1Q9UHJ3 866 aa16.09■□□□□ 0.17
VAPA-201ENST00000340541 LSM7Q9UK45 103 aaKnown RBP16.09■□□□□ 0.17
VAPA-201ENST00000340541 STRIP2Q9ULQ0 834 aa16.09■□□□□ 0.17
VAPA-201ENST00000340541 DYNC1LI1Q9Y6G9 523 aaKnown RBP16.09■□□□□ 0.17
VAPA-201ENST00000340541 DCDC2BA2VCK2 349 aa16.08■□□□□ 0.16
VAPA-201ENST00000340541 ANTXRLA6NF34 631 aa16.08■□□□□ 0.16
VAPA-201ENST00000340541 HMBSP08397 361 aa16.08■□□□□ 0.16
VAPA-201ENST00000340541 CHRM1P11229 460 aaPredicted RBP16.08■□□□□ 0.16
VAPA-201ENST00000340541 CDK11BP21127 795 aaKnown RBP16.08■□□□□ 0.16
VAPA-201ENST00000340541 EIF2DP41214 584 aaKnown RBP16.08■□□□□ 0.16
VAPA-201ENST00000340541 LIMK1P53667 647 aa16.08■□□□□ 0.16
VAPA-201ENST00000340541 BPIFB4P59827 614 aa16.08■□□□□ 0.16
VAPA-201ENST00000340541 POLR2FP61218 127 aaKnown RBP16.08■□□□□ 0.16
VAPA-201ENST00000340541 GAD2Q05329 585 aa16.08■□□□□ 0.16
VAPA-201ENST00000340541 SRSF5Q13243 272 aaKnown RBP16.08■□□□□ 0.16
VAPA-201ENST00000340541 FMNL3Q8IVF7 1028 aa16.08■□□□□ 0.16
VAPA-201ENST00000340541 SFTPA1Q8IWL2 248 aa16.08■□□□□ 0.16
VAPA-201ENST00000340541 RNF139Q8WU17 664 aa16.08■□□□□ 0.16
VAPA-201ENST00000340541 PIWIL1Q96J94 861 aaKnown RBP16.08■□□□□ 0.16
VAPA-201ENST00000340541 ZC3H10Q96K80 434 aaKnown RBP16.08■□□□□ 0.16
VAPA-201ENST00000340541 MARK1Q9P0L2 795 aa16.08■□□□□ 0.16
VAPA-201ENST00000340541 RALGAPA1Q6GYQ0 2036 aa16.07■□□□□ 0.16
VAPA-201ENST00000340541 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.07■□□□□ 0.16
VAPA-201ENST00000340541 SMTNL1A8MU46 457 aa16.07■□□□□ 0.16
VAPA-201ENST00000340541 K7EQS6 105 aa16.07■□□□□ 0.16
VAPA-201ENST00000340541 MSI1O43347 362 aaKnown RBP16.07■□□□□ 0.16
VAPA-201ENST00000340541 RNF40O75150 1001 aa16.07■□□□□ 0.16
VAPA-201ENST00000340541 RPP40O75818 363 aaKnown RBP16.07■□□□□ 0.16
VAPA-201ENST00000340541 IGLV3-27P01718 113 aa16.07■□□□□ 0.16
VAPA-201ENST00000340541 ZNF806P0C7X5 589 aa16.07■□□□□ 0.16
VAPA-201ENST00000340541 CORO1AP31146 461 aaKnown RBP16.07■□□□□ 0.16
VAPA-201ENST00000340541 CDH5P33151 784 aaPredicted RBP16.07■□□□□ 0.16
VAPA-201ENST00000340541 UBXN1Q04323 297 aa16.07■□□□□ 0.16
VAPA-201ENST00000340541 BEND5Q7L4P6 421 aa16.07■□□□□ 0.16
VAPA-201ENST00000340541 NOP9Q86U38 636 aaKnown RBP16.07■□□□□ 0.16
VAPA-201ENST00000340541 FAM217AQ8IXS0 508 aa16.07■□□□□ 0.16
VAPA-201ENST00000340541 C1orf131Q8NDD1 294 aaKnown RBP16.07■□□□□ 0.16
VAPA-201ENST00000340541 EPS8L1Q8TE68 723 aa16.07■□□□□ 0.16
VAPA-201ENST00000340541 PLD4Q96BZ4 506 aa16.07■□□□□ 0.16
VAPA-201ENST00000340541 AGO1Q9UL18 857 aaKnown RBP16.07■□□□□ 0.16
VAPA-201ENST00000340541 HBS1LQ9Y450 684 aaKnown RBP16.07■□□□□ 0.16
VAPA-201ENST00000340541 DAAM1Q9Y4D1 1078 aa16.07■□□□□ 0.16
VAPA-201ENST00000340541 PCDHGA5Q9Y5G8 931 aa16.07■□□□□ 0.16
VAPA-201ENST00000340541 A0A0A0MRY4 1105 aa16.06■□□□□ 0.16
VAPA-201ENST00000340541 TEX33O43247 280 aa16.06■□□□□ 0.16
VAPA-201ENST00000340541 SART1O43290 800 aaKnown RBP16.06■□□□□ 0.16
VAPA-201ENST00000340541 TULP3O75386 442 aa16.06■□□□□ 0.16
VAPA-201ENST00000340541 ADRB1P08588 477 aa16.06■□□□□ 0.16
VAPA-201ENST00000340541 HOXC13P31276 330 aa16.06■□□□□ 0.16
VAPA-201ENST00000340541 KRT9P35527 623 aa16.06■□□□□ 0.16
VAPA-201ENST00000340541 TAF5Q15542 800 aa16.06■□□□□ 0.16
VAPA-201ENST00000340541 ANO4Q32M45 955 aa16.06■□□□□ 0.16
VAPA-201ENST00000340541 ZSCAN23Q3MJ62 389 aa16.06■□□□□ 0.16
VAPA-201ENST00000340541 PTPN20Q4JDL3 420 aa16.06■□□□□ 0.16
VAPA-201ENST00000340541 SYPL2Q5VXT5 272 aa16.06■□□□□ 0.16
VAPA-201ENST00000340541 SYT13Q7L8C5 426 aa16.06■□□□□ 0.16
VAPA-201ENST00000340541 DENND1CQ8IV53 801 aa16.06■□□□□ 0.16
VAPA-201ENST00000340541 PPP1R13BQ96KQ4 1090 aa16.06■□□□□ 0.16
VAPA-201ENST00000340541 PNKPQ96T60 521 aa16.06■□□□□ 0.16
VAPA-201ENST00000340541 DCLK3Q9C098 648 aa16.06■□□□□ 0.16
VAPA-201ENST00000340541 CBX8Q9HC52 389 aa16.06■□□□□ 0.16
VAPA-201ENST00000340541 NLRC4Q9NPP4 1024 aa16.06■□□□□ 0.16
VAPA-201ENST00000340541 RTN4Q9NQC3 1192 aaKnown RBP16.06■□□□□ 0.16
VAPA-201ENST00000340541 EBF1Q9UH73 591 aa16.06■□□□□ 0.16
VAPA-201ENST00000340541 NOCTQ9UK39 431 aaKnown RBP16.06■□□□□ 0.16
VAPA-201ENST00000340541 NAALADL1Q9UQQ1 740 aa16.06■□□□□ 0.16
VAPA-201ENST00000340541 ZNF510Q9Y2H8 683 aa16.06■□□□□ 0.16
VAPA-201ENST00000340541 GFRA2O00451 464 aa16.05■□□□□ 0.16
VAPA-201ENST00000340541 TRIM24O15164 1050 aa16.05■□□□□ 0.16
VAPA-201ENST00000340541 CACNG3O60359 315 aa16.05■□□□□ 0.16
VAPA-201ENST00000340541 GFPT2O94808 682 aa16.05■□□□□ 0.16
VAPA-201ENST00000340541 EPN2O95208 641 aa16.05■□□□□ 0.16
VAPA-201ENST00000340541 KAT7O95251 611 aa16.05■□□□□ 0.16
VAPA-201ENST00000340541 PENKP01210 267 aaPredicted RBP16.05■□□□□ 0.16
VAPA-201ENST00000340541 ERBB2P04626 1255 aa16.05■□□□□ 0.16
VAPA-201ENST00000340541 NCAM1P13591 858 aa16.05■□□□□ 0.16
VAPA-201ENST00000340541 SOX5P35711 763 aa16.05■□□□□ 0.16
VAPA-201ENST00000340541 SKOR2Q2VWA4 1001 aaPredicted RBP16.05■□□□□ 0.16
VAPA-201ENST00000340541 TAF3Q5VWG9 929 aa16.05■□□□□ 0.16
VAPA-201ENST00000340541 TPGS1Q6ZTW0 290 aa16.05■□□□□ 0.16
VAPA-201ENST00000340541 NAT16Q8N8M0 369 aa16.05■□□□□ 0.16
VAPA-201ENST00000340541 DQX1Q8TE96 717 aaKnown RBP16.05■□□□□ 0.16
VAPA-201ENST00000340541 GOLGA1Q92805 767 aa16.05■□□□□ 0.16
VAPA-201ENST00000340541 ACDQ96AP0 544 aa16.05■□□□□ 0.16
VAPA-201ENST00000340541 FAM149B1Q96BN6 582 aa16.05■□□□□ 0.16
VAPA-201ENST00000340541 BBS2Q9BXC9 721 aa16.05■□□□□ 0.16
VAPA-201ENST00000340541 POLR3BQ9NW08 1133 aaPredicted RBP16.05■□□□□ 0.16
VAPA-201ENST00000340541 STOML2Q9UJZ1 356 aa16.05■□□□□ 0.16
VAPA-201ENST00000340541 PALM2-AKAP2B1ALY0 433 aaPredicted RBP16.04■□□□□ 0.16
VAPA-201ENST00000340541 NEDD8-MDP1E9PL57 170 aa16.04■□□□□ 0.16
VAPA-201ENST00000340541 AXIN1O15169 862 aa16.04■□□□□ 0.16
VAPA-201ENST00000340541 MMEP08473 750 aa16.04■□□□□ 0.16
VAPA-201ENST00000340541 TYRP14679 529 aa16.04■□□□□ 0.16
VAPA-201ENST00000340541 CHRNB2P17787 502 aa16.04■□□□□ 0.16
VAPA-201ENST00000340541 YWHAZP63104 245 aaKnown RBP16.04■□□□□ 0.16
VAPA-201ENST00000340541 KDSRQ06136 332 aa16.04■□□□□ 0.16
VAPA-201ENST00000340541 PPM1JQ5JR12 505 aa16.04■□□□□ 0.16
VAPA-201ENST00000340541 FYB2Q5VWT5 728 aa16.04■□□□□ 0.16
VAPA-201ENST00000340541 OLFML1Q6UWY5 402 aa16.04■□□□□ 0.16
VAPA-201ENST00000340541 FAM183BPQ6ZVS7 135 aa16.04■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms