RNA–Protein interactions for RNA: ENST00000340074.9

UBE3B-201, Transcript of ubiquitin protein ligase E3B, humanhuman

TSL 1 (best) BASIC

Gene UBE3B, Length 1,448 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3B-201ENST00000340074 FSTL4Q6MZW2 842 aa15.88■□□□□ 0.13
UBE3B-201ENST00000340074 PHLDB2Q86SQ0 1253 aa15.88■□□□□ 0.13
UBE3B-201ENST00000340074 NAT16Q8N8M0 369 aa15.88■□□□□ 0.13
UBE3B-201ENST00000340074 DTWD2Q8NBA8 298 aa15.88■□□□□ 0.13
UBE3B-201ENST00000340074 OLIG1Q8TAK6 271 aa15.88■□□□□ 0.13
UBE3B-201ENST00000340074 BHMTQ93088 406 aa15.88■□□□□ 0.13
UBE3B-201ENST00000340074 IQCDQ96DY2 449 aa15.88■□□□□ 0.13
UBE3B-201ENST00000340074 FCRL2Q96LA5 508 aaPredicted RBP15.88■□□□□ 0.13
UBE3B-201ENST00000340074 C11orf70Q9BRQ4 267 aa15.88■□□□□ 0.13
UBE3B-201ENST00000340074 RAPGEFL1Q9UHV5 662 aa15.88■□□□□ 0.13
UBE3B-201ENST00000340074 HCN4Q9Y3Q4 1203 aa15.88■□□□□ 0.13
UBE3B-201ENST00000340074 VPS13AQ96RL7 3174 aa15.87■□□□□ 0.13
UBE3B-201ENST00000340074 NEDD8-MDP1E9PL57 170 aa15.87■□□□□ 0.13
UBE3B-201ENST00000340074 IRAK2O43187 625 aa15.87■□□□□ 0.13
UBE3B-201ENST00000340074 HOXC11O43248 304 aaPredicted RBP15.87■□□□□ 0.13
UBE3B-201ENST00000340074 AP5Z1O43299 807 aa15.87■□□□□ 0.13
UBE3B-201ENST00000340074 EGFP01133 1207 aa15.87■□□□□ 0.13
UBE3B-201ENST00000340074 NOS2P35228 1153 aa15.87■□□□□ 0.13
UBE3B-201ENST00000340074 CHKAP35790 457 aa15.87■□□□□ 0.13
UBE3B-201ENST00000340074 SCNN1AP37088 669 aa15.87■□□□□ 0.13
UBE3B-201ENST00000340074 ZBED6P86452 979 aa15.87■□□□□ 0.13
UBE3B-201ENST00000340074 CDK17Q00537 523 aa15.87■□□□□ 0.13
UBE3B-201ENST00000340074 KLHL30Q0D2K2 578 aa15.87■□□□□ 0.13
UBE3B-201ENST00000340074 PTP4A2Q12974 167 aa15.87■□□□□ 0.13
UBE3B-201ENST00000340074 NNTQ13423 1086 aa15.87■□□□□ 0.13
UBE3B-201ENST00000340074 LRRC32Q14392 662 aa15.87■□□□□ 0.13
UBE3B-201ENST00000340074 NUGGCQ68CJ6 796 aa15.87■□□□□ 0.13
UBE3B-201ENST00000340074 SPECC1LQ69YQ0 1117 aa15.87■□□□□ 0.13
UBE3B-201ENST00000340074 ZNF571Q7Z3V5 609 aaPredicted RBP15.87■□□□□ 0.13
UBE3B-201ENST00000340074 GAS2L3Q86XJ1 694 aa15.87■□□□□ 0.13
UBE3B-201ENST00000340074 PHF13Q86YI8 300 aaPredicted RBP15.87■□□□□ 0.13
UBE3B-201ENST00000340074 UNC45BQ8IWX7 931 aa15.87■□□□□ 0.13
UBE3B-201ENST00000340074 EXOC4Q96A65 974 aa15.87■□□□□ 0.13
UBE3B-201ENST00000340074 P2RY11Q96G91 374 aa15.87■□□□□ 0.13
UBE3B-201ENST00000340074 SLC39A13Q96H72 371 aa15.87■□□□□ 0.13
UBE3B-201ENST00000340074 BBS2Q9BXC9 721 aa15.87■□□□□ 0.13
UBE3B-201ENST00000340074 NUCKS1Q9H1E3 243 aaKnown RBP15.87■□□□□ 0.13
UBE3B-201ENST00000340074 FAM204AQ9H8W3 233 aa15.87■□□□□ 0.13
UBE3B-201ENST00000340074 MARK1Q9P0L2 795 aa15.87■□□□□ 0.13
UBE3B-201ENST00000340074 LUC7L2Q9Y383 392 aaKnown RBP15.87■□□□□ 0.13
UBE3B-201ENST00000340074 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP15.87■□□□□ 0.13
UBE3B-201ENST00000340074 SYNJ2BP-COX16A0A087WUM0 186 aa15.86■□□□□ 0.13
UBE3B-201ENST00000340074 GALR2O43603 387 aaPredicted RBP15.86■□□□□ 0.13
UBE3B-201ENST00000340074 TYRP14679 529 aa15.86■□□□□ 0.13
UBE3B-201ENST00000340074 DRD1P21728 446 aa15.86■□□□□ 0.13
UBE3B-201ENST00000340074 CASP14P31944 242 aa15.86■□□□□ 0.13
UBE3B-201ENST00000340074 MATKP42679 507 aa15.86■□□□□ 0.13
UBE3B-201ENST00000340074 MAGEA9P43362 315 aa15.86■□□□□ 0.13
UBE3B-201ENST00000340074 NUBP1P53384 320 aa15.86■□□□□ 0.13
UBE3B-201ENST00000340074 MESP2Q0VG99 397 aa15.86■□□□□ 0.13
UBE3B-201ENST00000340074 EIF4EBP2Q13542 120 aaPredicted RBP15.86■□□□□ 0.13
UBE3B-201ENST00000340074 DGKKQ5KSL6 1271 aa15.86■□□□□ 0.13
UBE3B-201ENST00000340074 SARM1Q6SZW1 724 aa15.86■□□□□ 0.13
UBE3B-201ENST00000340074 ETFBKMTQ8IXQ9 262 aa15.86■□□□□ 0.13
UBE3B-201ENST00000340074 FAM217AQ8IXS0 508 aa15.86■□□□□ 0.13
UBE3B-201ENST00000340074 CPXM2Q8N436 756 aa15.86■□□□□ 0.13
UBE3B-201ENST00000340074 SYN2Q92777 582 aaPredicted RBP15.86■□□□□ 0.13
UBE3B-201ENST00000340074 EZH1Q92800 747 aaPredicted RBP15.86■□□□□ 0.13
UBE3B-201ENST00000340074 CHRDQ9H2X0 955 aa15.86■□□□□ 0.13
UBE3B-201ENST00000340074 METTL5Q9NRN9 209 aaKnown RBP15.86■□□□□ 0.13
UBE3B-201ENST00000340074 DDIT4Q9NX09 232 aa15.86■□□□□ 0.13
UBE3B-201ENST00000340074 TAS2R14Q9NYV8 317 aa15.86■□□□□ 0.13
UBE3B-201ENST00000340074 PLK2Q9NYY3 685 aa15.86■□□□□ 0.13
UBE3B-201ENST00000340074 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP15.86■□□□□ 0.13
UBE3B-201ENST00000340074 ADAM22Q9P0K1 906 aa15.86■□□□□ 0.13
UBE3B-201ENST00000340074 COX16Q9P0S2 106 aa15.86■□□□□ 0.13
UBE3B-201ENST00000340074 WDR35Q9P2L0 1181 aa15.86■□□□□ 0.13
UBE3B-201ENST00000340074 TMEM59LQ9UK28 342 aa15.86■□□□□ 0.13
UBE3B-201ENST00000340074 M0QYT0 321 aa15.85■□□□□ 0.13
UBE3B-201ENST00000340074 TULP3O75386 442 aa15.85■□□□□ 0.13
UBE3B-201ENST00000340074 LATS1O95835 1130 aa15.85■□□□□ 0.13
UBE3B-201ENST00000340074 EIF2DP41214 584 aaKnown RBP15.85■□□□□ 0.13
UBE3B-201ENST00000340074 MTAPQ13126 283 aa15.85■□□□□ 0.13
UBE3B-201ENST00000340074 NME3Q13232 169 aa15.85■□□□□ 0.13
UBE3B-201ENST00000340074 GAS6Q14393 721 aa15.85■□□□□ 0.13
UBE3B-201ENST00000340074 ZC3H12AQ5D1E8 599 aaKnown RBP15.85■□□□□ 0.13
UBE3B-201ENST00000340074 ADGRF1Q5T601 910 aa15.85■□□□□ 0.13
UBE3B-201ENST00000340074 HGSNATQ68CP4 663 aa15.85■□□□□ 0.13
UBE3B-201ENST00000340074 ACAD10Q6JQN1 1059 aa15.85■□□□□ 0.13
UBE3B-201ENST00000340074 TRNP1Q6NT89 227 aa15.85■□□□□ 0.13
UBE3B-201ENST00000340074 Q6ZS52 159 aa15.85■□□□□ 0.13
UBE3B-201ENST00000340074 MON1BQ7L1V2 547 aa15.85■□□□□ 0.13
UBE3B-201ENST00000340074 VSTM4Q8IW00 320 aa15.85■□□□□ 0.13
UBE3B-201ENST00000340074 PRSS33Q8NF86 280 aa15.85■□□□□ 0.13
UBE3B-201ENST00000340074 PNKPQ96T60 521 aa15.85■□□□□ 0.13
UBE3B-201ENST00000340074 NPY6RQ99463 290 aa15.85■□□□□ 0.13
UBE3B-201ENST00000340074 ADAM33Q9BZ11 813 aa15.85■□□□□ 0.13
UBE3B-201ENST00000340074 SPATA6Q9NWH7 488 aaPredicted RBP15.85■□□□□ 0.13
UBE3B-201ENST00000340074 CALCOCO1Q9P1Z2 691 aa15.85■□□□□ 0.13
UBE3B-201ENST00000340074 STOML2Q9UJZ1 356 aa15.85■□□□□ 0.13
UBE3B-201ENST00000340074 GOLGA6L7A0A1B0GV03 622 aa15.85■□□□□ 0.13
UBE3B-201ENST00000340074 TMCO5BA8MYB1 307 aa15.85■□□□□ 0.13
UBE3B-201ENST00000340074 TRIM24O15164 1050 aa15.85■□□□□ 0.13
UBE3B-201ENST00000340074 CACNG3O60359 315 aa15.85■□□□□ 0.13
UBE3B-201ENST00000340074 ACSL4O60488 711 aa15.85■□□□□ 0.13
UBE3B-201ENST00000340074 TSPAN3O60637 253 aa15.85■□□□□ 0.13
UBE3B-201ENST00000340074 GJB6O95452 261 aa15.85■□□□□ 0.13
UBE3B-201ENST00000340074 MOCS2O96007 188 aaPredicted RBP15.85■□□□□ 0.13
UBE3B-201ENST00000340074 CALB1P05937 261 aa15.85■□□□□ 0.13
UBE3B-201ENST00000340074 TFE3P19532 575 aaPredicted RBP15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms