RNA–Protein interactions for RNA: ENST00000339488.8

PTCHD4-201, Transcript of patched domain containing 4, humanhuman

APPRIS P1 TSL 2 BASIC

Gene PTCHD4, Length 2,850 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCHD4-201ENST00000339488 CCDC28AQ8IWP9 274 aa9.94□□□□□ -0.82
PTCHD4-201ENST00000339488 BLIDQ8IZY5 108 aa9.94□□□□□ -0.82
PTCHD4-201ENST00000339488 LILRB2Q8N423 598 aa9.94□□□□□ -0.82
PTCHD4-201ENST00000339488 BBOF1Q8ND07 529 aa9.94□□□□□ -0.82
PTCHD4-201ENST00000339488 SGCDQ92629 289 aa9.94□□□□□ -0.82
PTCHD4-201ENST00000339488 CFAP57Q96MR6 1250 aa9.94□□□□□ -0.82
PTCHD4-201ENST00000339488 ZNF641Q96N77 438 aaPredicted RBP9.94□□□□□ -0.82
PTCHD4-201ENST00000339488 UQCC2Q9BRT2 126 aa9.94□□□□□ -0.82
PTCHD4-201ENST00000339488 CCSER2Q9H7U1 834 aa9.94□□□□□ -0.82
PTCHD4-201ENST00000339488 AVENQ9NQS1 362 aaPredicted RBP9.94□□□□□ -0.82
PTCHD4-201ENST00000339488 VPS45Q9NRW7 570 aa9.94□□□□□ -0.82
PTCHD4-201ENST00000339488 COMMD8Q9NX08 183 aa9.94□□□□□ -0.82
PTCHD4-201ENST00000339488 MAT2BQ9NZL9 334 aa9.94□□□□□ -0.82
PTCHD4-201ENST00000339488 PSMC3IPQ9P2W1 217 aaPredicted RBP9.94□□□□□ -0.82
PTCHD4-201ENST00000339488 POTEMA6NI47 508 aa9.94□□□□□ -0.82
PTCHD4-201ENST00000339488 CFLARO15519 480 aa9.94□□□□□ -0.82
PTCHD4-201ENST00000339488 SCO2O43819 266 aa9.94□□□□□ -0.82
PTCHD4-201ENST00000339488 TOP3BO95985 862 aaKnown RBP9.94□□□□□ -0.82
PTCHD4-201ENST00000339488 EIF2S1P05198 315 aaKnown RBP9.94□□□□□ -0.82
PTCHD4-201ENST00000339488 SLC5A1P13866 664 aa9.94□□□□□ -0.82
PTCHD4-201ENST00000339488 PTPN9P43378 593 aa9.94□□□□□ -0.82
PTCHD4-201ENST00000339488 KRT6CP48668 564 aa9.94□□□□□ -0.82
PTCHD4-201ENST00000339488 GRB10Q13322 594 aa9.94□□□□□ -0.82
PTCHD4-201ENST00000339488 GNA13Q14344 377 aa9.94□□□□□ -0.82
PTCHD4-201ENST00000339488 PON2Q15165 354 aa9.94□□□□□ -0.82
PTCHD4-201ENST00000339488 MAPRE1Q15691 268 aaKnown RBP9.94□□□□□ -0.82
PTCHD4-201ENST00000339488 CYP1B1Q16678 543 aa9.94□□□□□ -0.82
PTCHD4-201ENST00000339488 KIZQ2M2Z5 673 aa9.94□□□□□ -0.82
PTCHD4-201ENST00000339488 KLHL38Q2WGJ6 581 aa9.94□□□□□ -0.82
PTCHD4-201ENST00000339488 Q3C1V9 767 aa9.94□□□□□ -0.82
PTCHD4-201ENST00000339488 C2CD6Q53TS8 623 aa9.94□□□□□ -0.82
PTCHD4-201ENST00000339488 GJC2Q5T442 439 aaPredicted RBP9.94□□□□□ -0.82
PTCHD4-201ENST00000339488 ZFYVE27Q5T4F4 411 aa9.94□□□□□ -0.82
PTCHD4-201ENST00000339488 SLC9A4Q6AI14 798 aa9.94□□□□□ -0.82
PTCHD4-201ENST00000339488 BNC2Q6ZN30 1099 aaPredicted RBP9.94□□□□□ -0.82
PTCHD4-201ENST00000339488 TICAM1Q8IUC6 712 aa9.94□□□□□ -0.82
PTCHD4-201ENST00000339488 THNSL1Q8IYQ7 743 aa9.94□□□□□ -0.82
PTCHD4-201ENST00000339488 HERVK_113Q902F9 699 aa9.94□□□□□ -0.82
PTCHD4-201ENST00000339488 SERAC1Q96JX3 654 aa9.94□□□□□ -0.82
PTCHD4-201ENST00000339488 TBATAQ96M53 351 aa9.94□□□□□ -0.82
PTCHD4-201ENST00000339488 HEXIM2Q96MH2 286 aaKnown RBP9.94□□□□□ -0.82
PTCHD4-201ENST00000339488 RIOK1Q9BRS2 568 aaKnown RBP9.94□□□□□ -0.82
PTCHD4-201ENST00000339488 BBS2Q9BXC9 721 aa9.94□□□□□ -0.82
PTCHD4-201ENST00000339488 NPLQ9BXD5 320 aaPredicted RBP9.94□□□□□ -0.82
PTCHD4-201ENST00000339488 DDX24Q9GZR7 859 aaKnown RBP eCLIP9.94□□□□□ -0.82
PTCHD4-201ENST00000339488 NYXQ9GZU5 481 aa9.94□□□□□ -0.82
PTCHD4-201ENST00000339488 SP140LQ9H930 580 aa9.94□□□□□ -0.82
PTCHD4-201ENST00000339488 NANOGQ9H9S0 305 aa9.94□□□□□ -0.82
PTCHD4-201ENST00000339488 SIX2Q9NPC8 291 aa9.94□□□□□ -0.82
PTCHD4-201ENST00000339488 DDX28Q9NUL7 540 aaKnown RBP9.94□□□□□ -0.82
PTCHD4-201ENST00000339488 BABAM1Q9NWV8 329 aa9.94□□□□□ -0.82
PTCHD4-201ENST00000339488 PADI4Q9UM07 663 aa9.94□□□□□ -0.82
PTCHD4-201ENST00000339488 GOLGA8QA0A0J9YX86 632 aa9.93□□□□□ -0.82
PTCHD4-201ENST00000339488 GOLGA8OA6NCC3 632 aa9.93□□□□□ -0.82
PTCHD4-201ENST00000339488 GOLGA8NF8WBI6 632 aa9.93□□□□□ -0.82
PTCHD4-201ENST00000339488 LINC01387J3KSC0 135 aa9.93□□□□□ -0.82
PTCHD4-201ENST00000339488 NUAK1O60285 661 aa9.93□□□□□ -0.82
PTCHD4-201ENST00000339488 LYPLA1O75608 230 aaPredicted RBP9.93□□□□□ -0.82
PTCHD4-201ENST00000339488 ALDH1A2O94788 518 aa9.93□□□□□ -0.82
PTCHD4-201ENST00000339488 FKBP9O95302 570 aa9.93□□□□□ -0.82
PTCHD4-201ENST00000339488 MATN1P21941 496 aa9.93□□□□□ -0.82
PTCHD4-201ENST00000339488 TGM1P22735 817 aa9.93□□□□□ -0.82
PTCHD4-201ENST00000339488 CYP2C18P33260 490 aa9.93□□□□□ -0.82
PTCHD4-201ENST00000339488 SLC26A2P50443 739 aa9.93□□□□□ -0.82
PTCHD4-201ENST00000339488 GPX6P59796 221 aa9.93□□□□□ -0.82
PTCHD4-201ENST00000339488 MRPS15P82914 257 aaKnown RBP9.93□□□□□ -0.82
PTCHD4-201ENST00000339488 IL1RL1Q01638 556 aa9.93□□□□□ -0.82
PTCHD4-201ENST00000339488 GALNT2Q10471 571 aa9.93□□□□□ -0.82
PTCHD4-201ENST00000339488 COASYQ13057 564 aa9.93□□□□□ -0.82
PTCHD4-201ENST00000339488 BFSP2Q13515 415 aa9.93□□□□□ -0.82
PTCHD4-201ENST00000339488 VWA5B1Q5TIE3 1220 aa9.93□□□□□ -0.82
PTCHD4-201ENST00000339488 UGT3A1Q6NUS8 523 aa9.93□□□□□ -0.82
PTCHD4-201ENST00000339488 GSTA5Q7RTV2 222 aa9.93□□□□□ -0.82
PTCHD4-201ENST00000339488 NUDCD3Q8IVD9 361 aa9.93□□□□□ -0.82
PTCHD4-201ENST00000339488 LSMEM2Q8N112 164 aa9.93□□□□□ -0.82
PTCHD4-201ENST00000339488 LCORLQ8N3X6 602 aa9.93□□□□□ -0.82
PTCHD4-201ENST00000339488 FBXW8Q8N3Y1 598 aa9.93□□□□□ -0.82
PTCHD4-201ENST00000339488 MAGEB6Q8N7X4 407 aa9.93□□□□□ -0.82
PTCHD4-201ENST00000339488 ASCC1Q8N9N2 400 aaKnown RBP9.93□□□□□ -0.82
PTCHD4-201ENST00000339488 BHLHE22Q8NFJ8 381 aaPredicted RBP9.93□□□□□ -0.82
PTCHD4-201ENST00000339488 SDR42E1Q8WUS8 393 aa9.93□□□□□ -0.82
PTCHD4-201ENST00000339488 TFB1MQ8WVM0 346 aaKnown RBP9.93□□□□□ -0.82
PTCHD4-201ENST00000339488 IMPG2Q9BZV3 1241 aa9.93□□□□□ -0.82
PTCHD4-201ENST00000339488 CLPBQ9H078 707 aa9.93□□□□□ -0.82
PTCHD4-201ENST00000339488 POLMQ9NP87 494 aaPredicted RBP9.93□□□□□ -0.82
PTCHD4-201ENST00000339488 C12orf71A8MTZ7 269 aa9.93□□□□□ -0.82
PTCHD4-201ENST00000339488 AGRPO00253 132 aa9.93□□□□□ -0.82
PTCHD4-201ENST00000339488 PDE8AO60658 829 aa9.93□□□□□ -0.82
PTCHD4-201ENST00000339488 NOL3O60936 208 aaKnown RBP9.93□□□□□ -0.82
PTCHD4-201ENST00000339488 RNASEH2AO75792 299 aaKnown RBP9.93□□□□□ -0.82
PTCHD4-201ENST00000339488 BCL10O95999 233 aa9.93□□□□□ -0.82
PTCHD4-201ENST00000339488 GSTM1P09488 218 aa9.93□□□□□ -0.82
PTCHD4-201ENST00000339488 AKR1B1P15121 316 aa9.93□□□□□ -0.82
PTCHD4-201ENST00000339488 HSPA6P17066 643 aa9.93□□□□□ -0.82
PTCHD4-201ENST00000339488 NR2F2P24468 414 aa9.93□□□□□ -0.82
PTCHD4-201ENST00000339488 FMO4P31512 558 aa9.93□□□□□ -0.82
PTCHD4-201ENST00000339488 IL6STP40189 918 aaPredicted RBP9.93□□□□□ -0.82
PTCHD4-201ENST00000339488 NAMPTP43490 491 aa9.93□□□□□ -0.82
PTCHD4-201ENST00000339488 POLD2P49005 469 aa9.93□□□□□ -0.82
PTCHD4-201ENST00000339488 PTK6Q13882 451 aa9.93□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 67.3 ms