RNA–Protein interactions for RNA: ENST00000339397.4

SRFBP1-201, Transcript of serum response factor binding protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SRFBP1, Length 2,855 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRFBP1-201ENST00000339397 ZNF670Q9BS34 389 aa7.67□□□□□ -1.18
SRFBP1-201ENST00000339397 XRN2Q9H0D6 950 aaKnown RBP eCLIP7.67□□□□□ -1.18
SRFBP1-201ENST00000339397 VPS37BQ9H9H4 285 aa7.67□□□□□ -1.18
SRFBP1-201ENST00000339397 KIF9Q9HAQ2 790 aa7.67□□□□□ -1.18
SRFBP1-201ENST00000339397 CSNK1G1Q9HCP0 422 aa7.67□□□□□ -1.18
SRFBP1-201ENST00000339397 CYLDQ9NQC7 956 aa7.67□□□□□ -1.18
SRFBP1-201ENST00000339397 ABI2Q9NYB9 513 aaPredicted RBP7.67□□□□□ -1.18
SRFBP1-201ENST00000339397 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP7.67□□□□□ -1.18
SRFBP1-201ENST00000339397 SFMBT1Q9UHJ3 866 aa7.67□□□□□ -1.18
SRFBP1-201ENST00000339397 MSI1O43347 362 aaKnown RBP7.67□□□□□ -1.18
SRFBP1-201ENST00000339397 DAB1O75553 588 aa7.67□□□□□ -1.18
SRFBP1-201ENST00000339397 CYP11A1P05108 521 aa7.67□□□□□ -1.18
SRFBP1-201ENST00000339397 APRTP07741 180 aa7.67□□□□□ -1.18
SRFBP1-201ENST00000339397 CHN1P15882 459 aa7.67□□□□□ -1.18
SRFBP1-201ENST00000339397 ADRA1BP35368 520 aa7.67□□□□□ -1.18
SRFBP1-201ENST00000339397 GRIK1P39086 918 aa7.67□□□□□ -1.18
SRFBP1-201ENST00000339397 ARPP19P56211 112 aa7.67□□□□□ -1.18
SRFBP1-201ENST00000339397 HIF1AQ16665 826 aa7.67□□□□□ -1.18
SRFBP1-201ENST00000339397 C6orf118Q5T5N4 469 aa7.67□□□□□ -1.18
SRFBP1-201ENST00000339397 RSPO2Q6UXX9 243 aaPredicted RBP7.67□□□□□ -1.18
SRFBP1-201ENST00000339397 C3orf62Q6ZUJ4 267 aa7.67□□□□□ -1.18
SRFBP1-201ENST00000339397 DEFB128Q7Z7B8 93 aa7.67□□□□□ -1.18
SRFBP1-201ENST00000339397 SCN4BQ8IWT1 228 aa7.67□□□□□ -1.18
SRFBP1-201ENST00000339397 PPIL6Q8IXY8 311 aa7.67□□□□□ -1.18
SRFBP1-201ENST00000339397 SLAIN1Q8ND83 568 aa7.67□□□□□ -1.18
SRFBP1-201ENST00000339397 MGARPQ8TDB4 240 aa7.67□□□□□ -1.18
SRFBP1-201ENST00000339397 RNF139Q8WU17 664 aa7.67□□□□□ -1.18
SRFBP1-201ENST00000339397 DEPDC1BQ8WUY9 529 aa7.67□□□□□ -1.18
SRFBP1-201ENST00000339397 PPP1R12CQ9BZL4 782 aa7.67□□□□□ -1.18
SRFBP1-201ENST00000339397 ETNK1Q9HBU6 452 aa7.67□□□□□ -1.18
SRFBP1-201ENST00000339397 OSER1Q9NX31 292 aa7.67□□□□□ -1.18
SRFBP1-201ENST00000339397 ALOX15BO15296 676 aa7.66□□□□□ -1.18
SRFBP1-201ENST00000339397 UPP2O95045 317 aa7.66□□□□□ -1.18
SRFBP1-201ENST00000339397 SELPP16109 830 aa7.66□□□□□ -1.18
SRFBP1-201ENST00000339397 STIP1P31948 543 aaKnown RBP7.66□□□□□ -1.18
SRFBP1-201ENST00000339397 CCT5P48643 541 aa7.66□□□□□ -1.18
SRFBP1-201ENST00000339397 USP46P62068 366 aa7.66□□□□□ -1.18
SRFBP1-201ENST00000339397 SMAD1Q15797 465 aaKnown RBP7.66□□□□□ -1.18
SRFBP1-201ENST00000339397 QPCTQ16769 361 aa7.66□□□□□ -1.18
SRFBP1-201ENST00000339397 HOOK3Q86VS8 718 aa7.66□□□□□ -1.18
SRFBP1-201ENST00000339397 METTL23Q86XA0 190 aa7.66□□□□□ -1.18
SRFBP1-201ENST00000339397 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP7.66□□□□□ -1.18
SRFBP1-201ENST00000339397 FBXO36Q8NEA4 188 aa7.66□□□□□ -1.18
SRFBP1-201ENST00000339397 ARHGEF2Q92974 986 aaKnown RBP7.66□□□□□ -1.18
SRFBP1-201ENST00000339397 TSEN34Q9BSV6 310 aaKnown RBP7.66□□□□□ -1.18
SRFBP1-201ENST00000339397 COLEC11Q9BWP8 271 aa7.66□□□□□ -1.18
SRFBP1-201ENST00000339397 RNF208Q9H0X6 261 aa7.66□□□□□ -1.18
SRFBP1-201ENST00000339397 CRISPLD1Q9H336 500 aa7.66□□□□□ -1.18
SRFBP1-201ENST00000339397 NMUR1Q9HB89 426 aa7.66□□□□□ -1.18
SRFBP1-201ENST00000339397 CNGB3Q9NQW8 809 aa7.66□□□□□ -1.18
SRFBP1-201ENST00000339397 CHMP2BQ9UQN3 213 aa7.66□□□□□ -1.18
SRFBP1-201ENST00000339397 SLC27A5Q9Y2P5 690 aa7.66□□□□□ -1.18
SRFBP1-201ENST00000339397 SCN5AQ14524 2016 aa7.66□□□□□ -1.18
SRFBP1-201ENST00000339397 REV3LO60673 3130 aa7.66□□□□□ -1.18
SRFBP1-201ENST00000339397 LOC101059915A0A1B0GWI6 518 aaPredicted RBP7.66□□□□□ -1.18
SRFBP1-201ENST00000339397 KBTBD13C9JR72 458 aa7.66□□□□□ -1.18
SRFBP1-201ENST00000339397 E7EVH7 732 aa7.66□□□□□ -1.18
SRFBP1-201ENST00000339397 KCNK1O00180 336 aa7.66□□□□□ -1.18
SRFBP1-201ENST00000339397 EOMESO95936 686 aa7.66□□□□□ -1.18
SRFBP1-201ENST00000339397 CYP2C18P33260 490 aa7.66□□□□□ -1.18
SRFBP1-201ENST00000339397 RDXP35241 583 aaKnown RBP7.66□□□□□ -1.18
SRFBP1-201ENST00000339397 SCNN1AP37088 669 aa7.66□□□□□ -1.18
SRFBP1-201ENST00000339397 MMP13P45452 471 aa7.66□□□□□ -1.18
SRFBP1-201ENST00000339397 IFNAR2P48551 515 aa7.66□□□□□ -1.18
SRFBP1-201ENST00000339397 SLC5A3P53794 718 aa7.66□□□□□ -1.18
SRFBP1-201ENST00000339397 KCNJ11Q14654 390 aa7.66□□□□□ -1.18
SRFBP1-201ENST00000339397 FAM171A1Q5VUB5 890 aa7.66□□□□□ -1.18
SRFBP1-201ENST00000339397 LEKR1Q6ZMV7 388 aa7.66□□□□□ -1.18
SRFBP1-201ENST00000339397 TAC4Q86UU9 113 aa7.66□□□□□ -1.18
SRFBP1-201ENST00000339397 NPWQ8N729 165 aa7.66□□□□□ -1.18
SRFBP1-201ENST00000339397 BBOF1Q8ND07 529 aa7.66□□□□□ -1.18
SRFBP1-201ENST00000339397 FAM129AQ9BZQ8 928 aa7.66□□□□□ -1.18
SRFBP1-201ENST00000339397 TKTL2Q9H0I9 626 aa7.66□□□□□ -1.18
SRFBP1-201ENST00000339397 SIK2Q9H0K1 926 aa7.66□□□□□ -1.18
SRFBP1-201ENST00000339397 RSPH14Q9UHP6 348 aa7.66□□□□□ -1.18
SRFBP1-201ENST00000339397 PHF24Q9UPV7 400 aa7.66□□□□□ -1.18
SRFBP1-201ENST00000339397 SHOC2Q9UQ13 582 aa7.66□□□□□ -1.18
SRFBP1-201ENST00000339397 A0A1W2PPM1 405 aa7.65□□□□□ -1.18
SRFBP1-201ENST00000339397 TNFRSF10BO14763 440 aa7.65□□□□□ -1.18
SRFBP1-201ENST00000339397 TADA2AO75478 443 aa7.65□□□□□ -1.18
SRFBP1-201ENST00000339397 TBX18O95935 607 aa7.65□□□□□ -1.18
SRFBP1-201ENST00000339397 RPLP2P05387 115 aaKnown RBP7.65□□□□□ -1.18
SRFBP1-201ENST00000339397 FAM163BP0C2L3 166 aa7.65□□□□□ -1.18
SRFBP1-201ENST00000339397 SRGAP2BP0DMP2 458 aa7.65□□□□□ -1.18
SRFBP1-201ENST00000339397 TGM2P21980 687 aa7.65□□□□□ -1.18
SRFBP1-201ENST00000339397 ELK3P41970 407 aa7.65□□□□□ -1.18
SRFBP1-201ENST00000339397 CRADDP78560 199 aa7.65□□□□□ -1.18
SRFBP1-201ENST00000339397 AP1B1Q10567 949 aa7.65□□□□□ -1.18
SRFBP1-201ENST00000339397 PLEKHG4Q58EX7 1191 aa7.65□□□□□ -1.18
SRFBP1-201ENST00000339397 PM20D1Q6GTS8 502 aa7.65□□□□□ -1.18
SRFBP1-201ENST00000339397 VSTM1Q6UX27 236 aa7.65□□□□□ -1.18
SRFBP1-201ENST00000339397 CAND1Q86VP6 1230 aaKnown RBP7.65□□□□□ -1.18
SRFBP1-201ENST00000339397 RELL1Q8IUW5 271 aa7.65□□□□□ -1.18
SRFBP1-201ENST00000339397 SRRM1Q8IYB3 904 aaKnown RBP7.65□□□□□ -1.18
SRFBP1-201ENST00000339397 MPP5Q8N3R9 675 aa7.65□□□□□ -1.18
SRFBP1-201ENST00000339397 CCNYQ8ND76 341 aa7.65□□□□□ -1.18
SRFBP1-201ENST00000339397 CCHCR1Q8TD31 782 aa7.65□□□□□ -1.18
SRFBP1-201ENST00000339397 PYROXD1Q8WU10 500 aa7.65□□□□□ -1.18
SRFBP1-201ENST00000339397 BCL7CQ8WUZ0 217 aaPredicted RBP7.65□□□□□ -1.18
SRFBP1-201ENST00000339397 CASD1Q96PB1 797 aa7.65□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 79.8 ms