RNA–Protein interactions for RNA: ENST00000338368.7

PRKDC-202, Transcript of protein kinase, DNA-activated, catalytic subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRKDC, Length 12,784 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKDC-202ENST00000338368 LOC100653049A0A140TA62 436 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 DCDC2CA8MYV0 355 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 SH3BP5O60239 455 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 KRT34O76011 436 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 MGAT5Q09328 741 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 SLC12A1Q13621 1099 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 TSTA3Q13630 321 aaPredicted RBP6.48□□□□□ -1.37
PRKDC-202ENST00000338368 TARBP2Q15633 366 aaKnown RBP6.48□□□□□ -1.37
PRKDC-202ENST00000338368 ANKRD20A2Q5SQ80 823 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 ANKRD20A1Q5TYW2 823 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 CYB5D1Q6P9G0 228 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 STRADAQ7RTN6 431 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 ASIC4Q96FT7 647 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 EIF2AQ9BY44 585 aaKnown RBP6.48□□□□□ -1.37
PRKDC-202ENST00000338368 PRDM12Q9H4Q4 367 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 EPS15L1Q9UBC2 864 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 HAO1Q9UJM8 370 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 TELO2Q9Y4R8 837 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 SNX3O60493 162 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 CDKN2BP42772 138 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 AQP5P55064 265 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 MMRN1Q13201 1228 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 NBPF20Q3BBV1 942 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 MARC1Q5VT66 337 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 KANSL3Q9P2N6 904 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 DCDC2Q9UHG0 476 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 NUDT5Q9UKK9 219 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 SLC12A8A0AV02 714 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 PARP6Q2NL67 630 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 MUC3BQ9H195 1237 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 LSM7Q9UK45 103 aaKnown RBP6.48□□□□□ -1.37
PRKDC-202ENST00000338368 PRDM4Q9UKN5 801 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 CABYRO75952 493 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 CYBBP04839 570 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 RALBP11234 206 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 NPY2RP49146 381 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 ATN1P54259 1190 aaPredicted RBP6.48□□□□□ -1.37
PRKDC-202ENST00000338368 EP400NLQ6ZTU2 488 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 VAT1Q99536 393 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 NRDE2Q9H7Z3 1164 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 ABCC13Q9NSE7 274 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 CDH9Q9ULB4 789 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 HOXA2O43364 376 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 MYL2P10916 166 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 PTGIRP43119 386 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 ERFP50548 548 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 POU5F1Q01860 360 aaKnown RBP6.48□□□□□ -1.37
PRKDC-202ENST00000338368 EFEMP1Q12805 493 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 HSP90AA5PQ58FG0 334 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 ILDR2Q71H61 639 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 TAS2R42Q7RTR8 314 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 LONP2Q86WA8 852 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 TEKT4Q8WW24 435 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 PRDM5Q9NQX1 630 aaPredicted RBP6.48□□□□□ -1.37
PRKDC-202ENST00000338368 MAP3K7O43318 606 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 VAPBO95292 243 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 ASGR1P07306 291 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 GOT1P17174 413 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 ERCC2P18074 760 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 BGNP21810 368 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 CASP2P42575 452 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 ASPAP45381 313 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 STRA8Q7Z7C7 330 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 ZNF75CPQ92670 426 aaPredicted RBP6.48□□□□□ -1.37
PRKDC-202ENST00000338368 LPPQ93052 612 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 TRPM5Q9NZQ8 1165 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 PADI3Q9ULW8 664 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 YWHAQP27348 245 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 NNMTP40261 264 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 MMP13P45452 471 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 TAS1R3Q7RTX0 852 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 STRA6Q9BX79 667 aa6.48□□□□□ -1.37
PRKDC-202ENST00000338368 SERPINB4P48594 390 aa6.47□□□□□ -1.37
PRKDC-202ENST00000338368 ZNF135P52742 658 aaPredicted RBP6.47□□□□□ -1.37
PRKDC-202ENST00000338368 FAM171A1Q5VUB5 890 aa6.47□□□□□ -1.37
PRKDC-202ENST00000338368 EFHBQ8N7U6 833 aa6.47□□□□□ -1.37
PRKDC-202ENST00000338368 KCNV2Q8TDN2 545 aa6.47□□□□□ -1.37
PRKDC-202ENST00000338368 HMX1Q9NP08 348 aaPredicted RBP6.47□□□□□ -1.37
PRKDC-202ENST00000338368 RUVBL2Q9Y230 463 aaKnown RBP6.47□□□□□ -1.37
PRKDC-202ENST00000338368 PTCH2Q9Y6C5 1203 aa6.47□□□□□ -1.37
PRKDC-202ENST00000338368 PTPRJQ12913 1337 aa6.47□□□□□ -1.37
PRKDC-202ENST00000338368 SLC26A9Q7LBE3 791 aa6.47□□□□□ -1.37
PRKDC-202ENST00000338368 PCYT2Q99447 389 aa6.47□□□□□ -1.37
PRKDC-202ENST00000338368 LGMNQ99538 433 aa6.47□□□□□ -1.37
PRKDC-202ENST00000338368 LRRC4CQ9HCJ2 640 aa6.47□□□□□ -1.37
PRKDC-202ENST00000338368 ACOT9Q9Y305 439 aa6.47□□□□□ -1.37
PRKDC-202ENST00000338368 MAGEB16A2A368 324 aa6.47□□□□□ -1.37
PRKDC-202ENST00000338368 IGF2BP3O00425 579 aaKnown RBP eCLIP6.47□□□□□ -1.37
PRKDC-202ENST00000338368 SMIM24O75264 130 aa6.47□□□□□ -1.37
PRKDC-202ENST00000338368 BANF1O75531 89 aa6.47□□□□□ -1.37
PRKDC-202ENST00000338368 GPD2P43304 727 aa6.47□□□□□ -1.37
PRKDC-202ENST00000338368 SLC11A2P49281 568 aa6.47□□□□□ -1.37
PRKDC-202ENST00000338368 NOMO1Q15155 1222 aa6.47□□□□□ -1.37
PRKDC-202ENST00000338368 CHADLQ6NUI6 762 aa6.47□□□□□ -1.37
PRKDC-202ENST00000338368 APBB2Q92870 758 aa6.47□□□□□ -1.37
PRKDC-202ENST00000338368 CCDC124Q96CT7 223 aaKnown RBP6.47□□□□□ -1.37
PRKDC-202ENST00000338368 GRHL1Q9NZI5 618 aa6.47□□□□□ -1.37
PRKDC-202ENST00000338368 COL2A1P02458 1487 aaPredicted RBP6.47□□□□□ -1.37
PRKDC-202ENST00000338368 A0A1W2PPM1 405 aa6.47□□□□□ -1.37
PRKDC-202ENST00000338368 TTLL13PA6NNM8 815 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.4 ms