RNA–Protein interactions for RNA: ENST00000336300.9

MRPL55-202, Transcript of mitochondrial ribosomal protein L55, humanhuman

APPRIS P1 TSL 2 BASIC

Gene MRPL55, Length 722 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MRPL55-202ENST00000336300 IER2Q9BTL4 223 aa16.46■□□□□ 0.23
MRPL55-202ENST00000336300 BBS2Q9BXC9 721 aa16.46■□□□□ 0.23
MRPL55-202ENST00000336300 HAUS4Q9H6D7 363 aa16.46■□□□□ 0.23
MRPL55-202ENST00000336300 FAM204AQ9H8W3 233 aa16.46■□□□□ 0.23
MRPL55-202ENST00000336300 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP16.46■□□□□ 0.23
MRPL55-202ENST00000336300 SHISA7A6NL88 538 aa16.45■□□□□ 0.22
MRPL55-202ENST00000336300 NEDD8-MDP1E9PL57 170 aa16.45■□□□□ 0.22
MRPL55-202ENST00000336300 GOLGA8SH3BPF8 625 aa16.45■□□□□ 0.22
MRPL55-202ENST00000336300 HOXC11O43248 304 aaPredicted RBP16.45■□□□□ 0.22
MRPL55-202ENST00000336300 DAB1O75553 588 aa16.45■□□□□ 0.22
MRPL55-202ENST00000336300 TRUB2O95900 331 aaKnown RBP16.45■□□□□ 0.22
MRPL55-202ENST00000336300 APOEP02649 317 aa16.45■□□□□ 0.22
MRPL55-202ENST00000336300 KLKB1P03952 638 aa16.45■□□□□ 0.22
MRPL55-202ENST00000336300 CHRNB1P11230 501 aa16.45■□□□□ 0.22
MRPL55-202ENST00000336300 PRKCIP41743 596 aa16.45■□□□□ 0.22
MRPL55-202ENST00000336300 MATKP42679 507 aa16.45■□□□□ 0.22
MRPL55-202ENST00000336300 CENPCQ03188 943 aa16.45■□□□□ 0.22
MRPL55-202ENST00000336300 MTA1Q13330 715 aa16.45■□□□□ 0.22
MRPL55-202ENST00000336300 FBXO43Q4G163 708 aa16.45■□□□□ 0.22
MRPL55-202ENST00000336300 TMEM196Q5HYL7 178 aa16.45■□□□□ 0.22
MRPL55-202ENST00000336300 ADGRF1Q5T601 910 aa16.45■□□□□ 0.22
MRPL55-202ENST00000336300 MMS22LQ6ZRQ5 1243 aa16.45■□□□□ 0.22
MRPL55-202ENST00000336300 SND1Q7KZF4 910 aaKnown RBP eCLIP16.45■□□□□ 0.22
MRPL55-202ENST00000336300 CPXM2Q8N436 756 aa16.45■□□□□ 0.22
MRPL55-202ENST00000336300 SLC30A5Q8TAD4 765 aa16.45■□□□□ 0.22
MRPL55-202ENST00000336300 ADAM32Q8TC27 787 aa16.45■□□□□ 0.22
MRPL55-202ENST00000336300 AZIN2Q96A70 460 aa16.45■□□□□ 0.22
MRPL55-202ENST00000336300 PNKPQ96T60 521 aa16.45■□□□□ 0.22
MRPL55-202ENST00000336300 PCDHB18PQ96TA0 734 aa16.45■□□□□ 0.22
MRPL55-202ENST00000336300 TRIM5Q9C035 493 aa16.45■□□□□ 0.22
MRPL55-202ENST00000336300 IRF2BPLQ9H1B7 796 aa16.45■□□□□ 0.22
MRPL55-202ENST00000336300 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.45■□□□□ 0.22
MRPL55-202ENST00000336300 DDIT4Q9NX09 232 aa16.45■□□□□ 0.22
MRPL55-202ENST00000336300 DEC1Q9P2X7 70 aa16.45■□□□□ 0.22
MRPL55-202ENST00000336300 PAXBP1Q9Y5B6 917 aa16.45■□□□□ 0.22
MRPL55-202ENST00000336300 KIF26AQ9ULI4 1882 aaPredicted RBP16.44■□□□□ 0.22
MRPL55-202ENST00000336300 F5P12259 2224 aa16.44■□□□□ 0.22
MRPL55-202ENST00000336300 GALR2O43603 387 aaPredicted RBP16.44■□□□□ 0.22
MRPL55-202ENST00000336300 TYRP14679 529 aa16.44■□□□□ 0.22
MRPL55-202ENST00000336300 CCR1P32246 355 aa16.44■□□□□ 0.22
MRPL55-202ENST00000336300 C1QBPQ07021 282 aaKnown RBP16.44■□□□□ 0.22
MRPL55-202ENST00000336300 PPP2R5DQ14738 602 aa16.44■□□□□ 0.22
MRPL55-202ENST00000336300 ACAD10Q6JQN1 1059 aa16.44■□□□□ 0.22
MRPL55-202ENST00000336300 ARCQ7LC44 396 aa16.44■□□□□ 0.22
MRPL55-202ENST00000336300 TAC4Q86UU9 113 aa16.44■□□□□ 0.22
MRPL55-202ENST00000336300 PHF13Q86YI8 300 aaPredicted RBP16.44■□□□□ 0.22
MRPL55-202ENST00000336300 NAT16Q8N8M0 369 aa16.44■□□□□ 0.22
MRPL55-202ENST00000336300 DDI1Q8WTU0 396 aa16.44■□□□□ 0.22
MRPL55-202ENST00000336300 CHFRQ96EP1 664 aa16.44■□□□□ 0.22
MRPL55-202ENST00000336300 PIWIL1Q96J94 861 aaKnown RBP16.44■□□□□ 0.22
MRPL55-202ENST00000336300 C11orf70Q9BRQ4 267 aa16.44■□□□□ 0.22
MRPL55-202ENST00000336300 SPATA6Q9NWH7 488 aaPredicted RBP16.44■□□□□ 0.22
MRPL55-202ENST00000336300 ZNHIT6Q9NWK9 470 aaKnown RBP16.44■□□□□ 0.22
MRPL55-202ENST00000336300 MARK1Q9P0L2 795 aa16.44■□□□□ 0.22
MRPL55-202ENST00000336300 ZDBF2Q9HCK1 2354 aa16.44■□□□□ 0.22
MRPL55-202ENST00000336300 SYNJ2BP-COX16A0A087WUM0 186 aa16.43■□□□□ 0.22
MRPL55-202ENST00000336300 FAM170AA1A519 330 aa16.43■□□□□ 0.22
MRPL55-202ENST00000336300 TYW5A2RUC4 315 aaKnown RBP16.43■□□□□ 0.22
MRPL55-202ENST00000336300 ANKRD62A6NC57 917 aa16.43■□□□□ 0.22
MRPL55-202ENST00000336300 IRAK2O43187 625 aa16.43■□□□□ 0.22
MRPL55-202ENST00000336300 ACSL4O60488 711 aa16.43■□□□□ 0.22
MRPL55-202ENST00000336300 ATG13O75143 517 aa16.43■□□□□ 0.22
MRPL55-202ENST00000336300 F9P00740 461 aa16.43■□□□□ 0.22
MRPL55-202ENST00000336300 IGLV3-27P01718 113 aa16.43■□□□□ 0.22
MRPL55-202ENST00000336300 APODP05090 189 aa16.43■□□□□ 0.22
MRPL55-202ENST00000336300 SERPING1P05155 500 aa16.43■□□□□ 0.22
MRPL55-202ENST00000336300 COL9A1P20849 921 aa16.43■□□□□ 0.22
MRPL55-202ENST00000336300 ABCB4P21439 1286 aa16.43■□□□□ 0.22
MRPL55-202ENST00000336300 CASP14P31944 242 aa16.43■□□□□ 0.22
MRPL55-202ENST00000336300 GRIA2P42262 883 aa16.43■□□□□ 0.22
MRPL55-202ENST00000336300 CCINQ13939 588 aa16.43■□□□□ 0.22
MRPL55-202ENST00000336300 MPPE1Q53F39 396 aa16.43■□□□□ 0.22
MRPL55-202ENST00000336300 C2CD6Q53TS8 623 aa16.43■□□□□ 0.22
MRPL55-202ENST00000336300 TDRD12Q587J7 1177 aaKnown RBP16.43■□□□□ 0.22
MRPL55-202ENST00000336300 SARM1Q6SZW1 724 aa16.43■□□□□ 0.22
MRPL55-202ENST00000336300 C1orf210Q8IVY1 113 aa16.43■□□□□ 0.22
MRPL55-202ENST00000336300 VSTM4Q8IW00 320 aa16.43■□□□□ 0.22
MRPL55-202ENST00000336300 ZNF687Q8N1G0 1237 aa16.43■□□□□ 0.22
MRPL55-202ENST00000336300 ATP6V0D2Q8N8Y2 350 aa16.43■□□□□ 0.22
MRPL55-202ENST00000336300 TMA16Q96EY4 203 aaKnown RBP16.43■□□□□ 0.22
MRPL55-202ENST00000336300 VCPIP1Q96JH7 1222 aa16.43■□□□□ 0.22
MRPL55-202ENST00000336300 SELENOOQ9BVL4 669 aa16.43■□□□□ 0.22
MRPL55-202ENST00000336300 IRX2Q9BZI1 471 aaPredicted RBP16.43■□□□□ 0.22
MRPL55-202ENST00000336300 ARHGEF4Q9NR80 690 aa16.43■□□□□ 0.22
MRPL55-202ENST00000336300 COX16Q9P0S2 106 aa16.43■□□□□ 0.22
MRPL55-202ENST00000336300 DLGAP2Q9P1A6 1054 aa16.43■□□□□ 0.22
MRPL55-202ENST00000336300 STOML2Q9UJZ1 356 aa16.43■□□□□ 0.22
MRPL55-202ENST00000336300 COL4A2P08572 1712 aa16.42■□□□□ 0.22
MRPL55-202ENST00000336300 TBC1D3BA6NDS4 549 aa16.42■□□□□ 0.22
MRPL55-202ENST00000336300 M0QYT0 321 aa16.42■□□□□ 0.22
MRPL55-202ENST00000336300 LAMTOR5O43504 91 aa16.42■□□□□ 0.22
MRPL55-202ENST00000336300 GYPCP04921 128 aa16.42■□□□□ 0.22
MRPL55-202ENST00000336300 KRT3P12035 628 aa16.42■□□□□ 0.22
MRPL55-202ENST00000336300 GZMAP12544 262 aa16.42■□□□□ 0.22
MRPL55-202ENST00000336300 SKILP12757 684 aa16.42■□□□□ 0.22
MRPL55-202ENST00000336300 DESP17661 470 aa16.42■□□□□ 0.22
MRPL55-202ENST00000336300 OPRD1P41143 372 aa16.42■□□□□ 0.22
MRPL55-202ENST00000336300 NME3Q13232 169 aa16.42■□□□□ 0.22
MRPL55-202ENST00000336300 FZD5Q13467 585 aa16.42■□□□□ 0.22
MRPL55-202ENST00000336300 SLC25A52Q3SY17 297 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 41.5 ms