RNA–Protein interactions for RNA: ENST00000334731.6

C9orf85-201, Transcript of chromosome 9 open reading frame 85, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf85, Length 1,279 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf85-201ENST00000334731 WDR3Q9UNX4 943 aaKnown RBP eCLIP11.74□□□□□ -0.53
C9orf85-201ENST00000334731 CNTN6Q9UQ52 1028 aa11.74□□□□□ -0.53
C9orf85-201ENST00000334731 PCDHGA5Q9Y5G8 931 aa11.74□□□□□ -0.53
C9orf85-201ENST00000334731 DCHS1Q96JQ0 3298 aa11.74□□□□□ -0.53
C9orf85-201ENST00000334731 A0A1W2PQF6 199 aa11.73□□□□□ -0.53
C9orf85-201ENST00000334731 DCDC2BA2VCK2 349 aa11.73□□□□□ -0.53
C9orf85-201ENST00000334731 PIK3R2O00459 728 aa11.73□□□□□ -0.53
C9orf85-201ENST00000334731 LCP1P13796 627 aa11.73□□□□□ -0.53
C9orf85-201ENST00000334731 BCKDHBP21953 392 aa11.73□□□□□ -0.53
C9orf85-201ENST00000334731 NTSR1P30989 418 aa11.73□□□□□ -0.53
C9orf85-201ENST00000334731 GBP1P32455 592 aa11.73□□□□□ -0.53
C9orf85-201ENST00000334731 WASP42768 502 aa11.73□□□□□ -0.53
C9orf85-201ENST00000334731 DGKGP49619 791 aa11.73□□□□□ -0.53
C9orf85-201ENST00000334731 RGS7P49802 495 aa11.73□□□□□ -0.53
C9orf85-201ENST00000334731 DAOAP59103 153 aa11.73□□□□□ -0.53
C9orf85-201ENST00000334731 SF3A2Q15428 464 aaKnown RBP11.73□□□□□ -0.53
C9orf85-201ENST00000334731 STILQ15468 1287 aa11.73□□□□□ -0.53
C9orf85-201ENST00000334731 FYB2Q5VWT5 728 aa11.73□□□□□ -0.53
C9orf85-201ENST00000334731 EGFLAMQ63HQ2 1017 aa11.73□□□□□ -0.53
C9orf85-201ENST00000334731 TRMT11Q7Z4G4 463 aaKnown RBP11.73□□□□□ -0.53
C9orf85-201ENST00000334731 C11orf74Q86VG3 221 aa11.73□□□□□ -0.53
C9orf85-201ENST00000334731 IRF2BP1Q8IU81 584 aa11.73□□□□□ -0.53
C9orf85-201ENST00000334731 HMGB4Q8WW32 186 aa11.73□□□□□ -0.53
C9orf85-201ENST00000334731 ATG2BQ96BY7 2078 aa11.73□□□□□ -0.53
C9orf85-201ENST00000334731 RTKNQ9BST9 563 aa11.73□□□□□ -0.53
C9orf85-201ENST00000334731 UBE2TQ9NPD8 197 aaPredicted RBP11.73□□□□□ -0.53
C9orf85-201ENST00000334731 ABCC13Q9NSE7 274 aa11.73□□□□□ -0.53
C9orf85-201ENST00000334731 OLA1Q9NTK5 396 aaKnown RBP11.73□□□□□ -0.53
C9orf85-201ENST00000334731 HBS1LQ9Y450 684 aaKnown RBP11.73□□□□□ -0.53
C9orf85-201ENST00000334731 DMXL1Q9Y485 3027 aa11.73□□□□□ -0.53
C9orf85-201ENST00000334731 TCRBV21S2A2A0A5A6 115 aa11.72□□□□□ -0.53
C9orf85-201ENST00000334731 MED19A0JLT2 244 aaPredicted RBP11.72□□□□□ -0.53
C9orf85-201ENST00000334731 BCLAF3A2AJT9 711 aaKnown RBP11.72□□□□□ -0.53
C9orf85-201ENST00000334731 M0QYV0 167 aa11.72□□□□□ -0.53
C9orf85-201ENST00000334731 SLC30A4O14863 429 aa11.72□□□□□ -0.53
C9orf85-201ENST00000334731 MPLP40238 635 aa11.72□□□□□ -0.53
C9orf85-201ENST00000334731 P2RY2P41231 377 aa11.72□□□□□ -0.53
C9orf85-201ENST00000334731 RPL34P49207 117 aaKnown RBP11.72□□□□□ -0.53
C9orf85-201ENST00000334731 HARS2P49590 506 aaKnown RBP11.72□□□□□ -0.53
C9orf85-201ENST00000334731 MAP7D1Q3KQU3 841 aa11.72□□□□□ -0.53
C9orf85-201ENST00000334731 PMS2CLQ68D20 193 aa11.72□□□□□ -0.53
C9orf85-201ENST00000334731 CREBRFQ8IUR6 639 aa11.72□□□□□ -0.53
C9orf85-201ENST00000334731 FAM217AQ8IXS0 508 aa11.72□□□□□ -0.53
C9orf85-201ENST00000334731 CHPFQ8IZ52 775 aa11.72□□□□□ -0.53
C9orf85-201ENST00000334731 CPXM2Q8N436 756 aa11.72□□□□□ -0.53
C9orf85-201ENST00000334731 FRMD1Q8N878 549 aa11.72□□□□□ -0.53
C9orf85-201ENST00000334731 MLKLQ8NB16 471 aa11.72□□□□□ -0.53
C9orf85-201ENST00000334731 RNF139Q8WU17 664 aa11.72□□□□□ -0.53
C9orf85-201ENST00000334731 RLN3Q8WXF3 142 aa11.72□□□□□ -0.53
C9orf85-201ENST00000334731 IRGQQ8WZA9 623 aa11.72□□□□□ -0.53
C9orf85-201ENST00000334731 PLD4Q96BZ4 506 aa11.72□□□□□ -0.53
C9orf85-201ENST00000334731 HSFY1Q96LI6 401 aa11.72□□□□□ -0.53
C9orf85-201ENST00000334731 GABRG3Q99928 467 aa11.72□□□□□ -0.53
C9orf85-201ENST00000334731 CRACR2AQ9BSW2 395 aa11.72□□□□□ -0.53
C9orf85-201ENST00000334731 SMOC1Q9H4F8 434 aa11.72□□□□□ -0.53
C9orf85-201ENST00000334731 CD248Q9HCU0 757 aa11.72□□□□□ -0.53
C9orf85-201ENST00000334731 VPS45Q9NRW7 570 aa11.72□□□□□ -0.53
C9orf85-201ENST00000334731 RXFP3Q9NSD7 469 aa11.72□□□□□ -0.53
C9orf85-201ENST00000334731 BCCIPQ9P287 314 aaKnown RBP eCLIP11.72□□□□□ -0.53
C9orf85-201ENST00000334731 SFMBT1Q9UHJ3 866 aa11.72□□□□□ -0.53
C9orf85-201ENST00000334731 CLEC4EQ9ULY5 219 aa11.72□□□□□ -0.53
C9orf85-201ENST00000334731 SLC27A6Q9Y2P4 619 aa11.72□□□□□ -0.53
C9orf85-201ENST00000334731 CAVIN2O95810 425 aa11.71□□□□□ -0.53
C9orf85-201ENST00000334731 KRT5P13647 590 aa11.71□□□□□ -0.53
C9orf85-201ENST00000334731 HOXB2P14652 356 aa11.71□□□□□ -0.53
C9orf85-201ENST00000334731 GABRG2P18507 467 aa11.71□□□□□ -0.53
C9orf85-201ENST00000334731 GPD2P43304 727 aa11.71□□□□□ -0.53
C9orf85-201ENST00000334731 MFAP3P55082 362 aa11.71□□□□□ -0.53
C9orf85-201ENST00000334731 CREB5Q02930 508 aa11.71□□□□□ -0.53
C9orf85-201ENST00000334731 AASDHQ4L235 1098 aaPredicted RBP11.71□□□□□ -0.53
C9orf85-201ENST00000334731 SDE2Q6IQ49 451 aa11.71□□□□□ -0.53
C9orf85-201ENST00000334731 SCUBE3Q8IX30 993 aa11.71□□□□□ -0.53
C9orf85-201ENST00000334731 PGBD3Q8N328 593 aa11.71□□□□□ -0.53
C9orf85-201ENST00000334731 C12orf50Q8NA57 414 aaPredicted RBP11.71□□□□□ -0.53
C9orf85-201ENST00000334731 CLEC4CQ8WTT0 213 aa11.71□□□□□ -0.53
C9orf85-201ENST00000334731 PIWIL1Q96J94 861 aaKnown RBP11.71□□□□□ -0.53
C9orf85-201ENST00000334731 CLSTN2Q9H4D0 955 aa11.71□□□□□ -0.53
C9orf85-201ENST00000334731 MBD1Q9UIS9 605 aaPredicted RBP11.71□□□□□ -0.53
C9orf85-201ENST00000334731 STOML2Q9UJZ1 356 aa11.71□□□□□ -0.53
C9orf85-201ENST00000334731 SDK1Q7Z5N4 2213 aa11.7□□□□□ -0.54
C9orf85-201ENST00000334731 WASH3PC4AMC7 463 aa11.7□□□□□ -0.54
C9orf85-201ENST00000334731 GFRA2O00451 464 aa11.7□□□□□ -0.54
C9orf85-201ENST00000334731 MSI1O43347 362 aaKnown RBP11.7□□□□□ -0.54
C9orf85-201ENST00000334731 FBXO21O94952 628 aa11.7□□□□□ -0.54
C9orf85-201ENST00000334731 LTFP02788 710 aa11.7□□□□□ -0.54
C9orf85-201ENST00000334731 CYBBP04839 570 aa11.7□□□□□ -0.54
C9orf85-201ENST00000334731 FYNP06241 537 aa11.7□□□□□ -0.54
C9orf85-201ENST00000334731 SLC9A1P19634 815 aa11.7□□□□□ -0.54
C9orf85-201ENST00000334731 LIMK1P53667 647 aa11.7□□□□□ -0.54
C9orf85-201ENST00000334731 APBA1Q02410 837 aa11.7□□□□□ -0.54
C9orf85-201ENST00000334731 BYSLQ13895 437 aaKnown RBP11.7□□□□□ -0.54
C9orf85-201ENST00000334731 GEN1Q17RS7 908 aa11.7□□□□□ -0.54
C9orf85-201ENST00000334731 TCEAL6Q6IPX3 200 aa11.7□□□□□ -0.54
C9orf85-201ENST00000334731 KIAA1211LQ6NV74 962 aa11.7□□□□□ -0.54
C9orf85-201ENST00000334731 MSANTD2Q6P1R3 559 aa11.7□□□□□ -0.54
C9orf85-201ENST00000334731 DENND1BQ6P3S1 775 aa11.7□□□□□ -0.54
C9orf85-201ENST00000334731 GJB7Q6PEY0 223 aa11.7□□□□□ -0.54
C9orf85-201ENST00000334731 TRIM65Q6PJ69 517 aa11.7□□□□□ -0.54
C9orf85-201ENST00000334731 GBP6Q6ZN66 633 aa11.7□□□□□ -0.54
C9orf85-201ENST00000334731 ENOSF1Q7L5Y1 443 aa11.7□□□□□ -0.54
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms