RNA–Protein interactions for RNA: ENST00000334136.9

HDAC6-201, Transcript of histone deacetylase 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HDAC6, Length 4,190 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-201ENST00000334136 SPDYE1Q8NFV5 336 aaPredicted RBP12.21□□□□□ -0.46
HDAC6-201ENST00000334136 MIEF2Q96C03 454 aa12.21□□□□□ -0.46
HDAC6-201ENST00000334136 ARMC5Q96C12 935 aa12.21□□□□□ -0.46
HDAC6-201ENST00000334136 ZSWIM1Q9BR11 485 aa12.21□□□□□ -0.46
HDAC6-201ENST00000334136 PHTF1Q9UMS5 762 aa12.21□□□□□ -0.46
HDAC6-201ENST00000334136 GMNNO75496 209 aa12.2□□□□□ -0.46
HDAC6-201ENST00000334136 LSM8O95777 96 aaKnown RBP12.2□□□□□ -0.46
HDAC6-201ENST00000334136 KRT7P08729 469 aa12.2□□□□□ -0.46
HDAC6-201ENST00000334136 HOXA11P31270 313 aaPredicted RBP12.2□□□□□ -0.46
HDAC6-201ENST00000334136 TKTL1P51854 596 aa12.2□□□□□ -0.46
HDAC6-201ENST00000334136 KCNJ2P63252 427 aa12.2□□□□□ -0.46
HDAC6-201ENST00000334136 MRPS35P82673 323 aaKnown RBP12.2□□□□□ -0.46
HDAC6-201ENST00000334136 ARHGAP15Q53QZ3 475 aa12.2□□□□□ -0.46
HDAC6-201ENST00000334136 AGAP11Q8TF27 550 aa12.2□□□□□ -0.46
HDAC6-201ENST00000334136 ACSF2Q96CM8 615 aaPredicted RBP12.2□□□□□ -0.46
HDAC6-201ENST00000334136 DHX35Q9H5Z1 703 aaKnown RBP12.2□□□□□ -0.46
HDAC6-201ENST00000334136 ACP6Q9NPH0 428 aa12.2□□□□□ -0.46
HDAC6-201ENST00000334136 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP12.2□□□□□ -0.46
HDAC6-201ENST00000334136 LSM7Q9UK45 103 aaKnown RBP12.2□□□□□ -0.46
HDAC6-201ENST00000334136 C15orf41Q9Y2V0 281 aa12.2□□□□□ -0.46
HDAC6-201ENST00000334136 PJA2O43164 708 aa12.2□□□□□ -0.46
HDAC6-201ENST00000334136 PREPLQ4J6C6 727 aaPredicted RBP12.2□□□□□ -0.46
HDAC6-201ENST00000334136 KCNT2Q6UVM3 1135 aa12.2□□□□□ -0.46
HDAC6-201ENST00000334136 DEPDC1BQ8WUY9 529 aa12.2□□□□□ -0.46
HDAC6-201ENST00000334136 RSPH1Q8WYR4 309 aa12.2□□□□□ -0.46
HDAC6-201ENST00000334136 MRPL45Q9BRJ2 306 aaKnown RBP12.2□□□□□ -0.46
HDAC6-201ENST00000334136 TRIM56Q9BRZ2 755 aaKnown RBP12.2□□□□□ -0.46
HDAC6-201ENST00000334136 SHCBP1LQ9BZQ2 653 aa12.2□□□□□ -0.46
HDAC6-201ENST00000334136 GANQ9H2C0 597 aa12.2□□□□□ -0.46
HDAC6-201ENST00000334136 SALL4Q9UJQ4 1053 aa12.2□□□□□ -0.46
HDAC6-201ENST00000334136 RWDD3Q9Y3V2 267 aa12.2□□□□□ -0.46
HDAC6-201ENST00000334136 OR6C75A6NL08 312 aa12.2□□□□□ -0.46
HDAC6-201ENST00000334136 H3BRJ5 948 aa12.2□□□□□ -0.46
HDAC6-201ENST00000334136 NRP1O14786 923 aa12.2□□□□□ -0.46
HDAC6-201ENST00000334136 MICAL2O94851 1124 aa12.2□□□□□ -0.46
HDAC6-201ENST00000334136 DEUP1Q05D60 604 aa12.2□□□□□ -0.46
HDAC6-201ENST00000334136 CNGA2Q16280 664 aa12.2□□□□□ -0.46
HDAC6-201ENST00000334136 KLHL38Q2WGJ6 581 aa12.2□□□□□ -0.46
HDAC6-201ENST00000334136 ITIH5Q86UX2 942 aa12.2□□□□□ -0.46
HDAC6-201ENST00000334136 SLC7A14Q8TBB6 771 aa12.2□□□□□ -0.46
HDAC6-201ENST00000334136 SH3GL2Q99962 352 aa12.2□□□□□ -0.46
HDAC6-201ENST00000334136 CACNG4Q9UBN1 327 aa12.2□□□□□ -0.46
HDAC6-201ENST00000334136 DDX3XO00571 662 aaKnown RBP eCLIP12.19□□□□□ -0.461e-8■■■■□ 23.1
HDAC6-201ENST00000334136 PPP1R12AO14974 1030 aaPredicted RBP12.19□□□□□ -0.46
HDAC6-201ENST00000334136 DNAJC6O75061 913 aa12.19□□□□□ -0.46
HDAC6-201ENST00000334136 CKMP06732 381 aa12.19□□□□□ -0.46
HDAC6-201ENST00000334136 KRT4P19013 534 aa12.19□□□□□ -0.46
HDAC6-201ENST00000334136 FLT3P36888 993 aa12.19□□□□□ -0.46
HDAC6-201ENST00000334136 RPL21P46778 160 aaKnown RBP12.19□□□□□ -0.46
HDAC6-201ENST00000334136 ENPEPQ07075 957 aa12.19□□□□□ -0.46
HDAC6-201ENST00000334136 LRRC26Q2I0M4 334 aa12.19□□□□□ -0.46
HDAC6-201ENST00000334136 PLPP4Q5VZY2 271 aa12.19□□□□□ -0.46
HDAC6-201ENST00000334136 CCT6BQ92526 530 aa12.19□□□□□ -0.46
HDAC6-201ENST00000334136 SERPINB12Q96P63 405 aa12.19□□□□□ -0.46
HDAC6-201ENST00000334136 MYL4P12829 197 aa12.19□□□□□ -0.46
HDAC6-201ENST00000334136 KCNE1P15382 129 aa12.19□□□□□ -0.46
HDAC6-201ENST00000334136 CREMQ03060 361 aa12.19□□□□□ -0.46
HDAC6-201ENST00000334136 ITKQ08881 620 aa12.19□□□□□ -0.46
HDAC6-201ENST00000334136 THOC5Q13769 683 aaKnown RBP12.19□□□□□ -0.46
HDAC6-201ENST00000334136 PPM1LQ5SGD2 360 aa12.19□□□□□ -0.46
HDAC6-201ENST00000334136 AGMOQ6ZNB7 445 aa12.19□□□□□ -0.46
HDAC6-201ENST00000334136 C3orf62Q6ZUJ4 267 aa12.19□□□□□ -0.46
HDAC6-201ENST00000334136 NOP9Q86U38 636 aaKnown RBP12.19□□□□□ -0.46
HDAC6-201ENST00000334136 YAF2Q8IY57 180 aa12.19□□□□□ -0.46
HDAC6-201ENST00000334136 FAM71AQ8IYT1 594 aa12.19□□□□□ -0.46
HDAC6-201ENST00000334136 FEZF2Q8TBJ5 459 aa12.19□□□□□ -0.46
HDAC6-201ENST00000334136 GIPC2Q8TF65 315 aa12.19□□□□□ -0.46
HDAC6-201ENST00000334136 FAM53CQ9NYF3 392 aa12.19□□□□□ -0.46
HDAC6-201ENST00000334136 PCDHGC5Q9Y5F6 944 aa12.19□□□□□ -0.46
HDAC6-201ENST00000334136 FBXO21O94952 628 aa12.19□□□□□ -0.46
HDAC6-201ENST00000334136 CALCAP01258 141 aa12.19□□□□□ -0.46
HDAC6-201ENST00000334136 ATXN3P54252 364 aaPredicted RBP12.19□□□□□ -0.46
HDAC6-201ENST00000334136 ART3Q13508 389 aa12.19□□□□□ -0.46
HDAC6-201ENST00000334136 ARNTL2Q8WYA1 636 aa12.19□□□□□ -0.46
HDAC6-201ENST00000334136 ZNF516Q92618 1163 aa12.19□□□□□ -0.46
HDAC6-201ENST00000334136 VPS11Q9H270 941 aa12.19□□□□□ -0.46
HDAC6-201ENST00000334136 FBXO44Q9H4M3 255 aa12.19□□□□□ -0.46
HDAC6-201ENST00000334136 CNTN3Q9P232 1028 aa12.19□□□□□ -0.46
HDAC6-201ENST00000334136 ZFATQ9P243 1243 aa12.19□□□□□ -0.46
HDAC6-201ENST00000334136 TJP2Q9UDY2 1190 aa12.19□□□□□ -0.46
HDAC6-201ENST00000334136 SMG5Q9UPR3 1016 aaKnown RBP12.19□□□□□ -0.46
HDAC6-201ENST00000334136 CDY1Q9Y6F8 540 aa12.19□□□□□ -0.46
HDAC6-201ENST00000334136 KRT38O76015 456 aa12.19□□□□□ -0.46
HDAC6-201ENST00000334136 GSTA1P08263 222 aa12.19□□□□□ -0.46
HDAC6-201ENST00000334136 GPD1P21695 349 aa12.19□□□□□ -0.46
HDAC6-201ENST00000334136 CUL3Q13618 768 aa12.19□□□□□ -0.46
HDAC6-201ENST00000334136 NT5DC3Q86UY8 548 aa12.19□□□□□ -0.46
HDAC6-201ENST00000334136 MIB1Q86YT6 1006 aa12.19□□□□□ -0.46
HDAC6-201ENST00000334136 BBS5Q8N3I7 341 aa12.19□□□□□ -0.46
HDAC6-201ENST00000334136 C12orf29Q8N999 325 aa12.19□□□□□ -0.46
HDAC6-201ENST00000334136 BAP1Q92560 729 aa12.19□□□□□ -0.46
HDAC6-201ENST00000334136 MTBPQ96DY7 904 aa12.19□□□□□ -0.46
HDAC6-201ENST00000334136 KREMEN1Q96MU8 473 aa12.19□□□□□ -0.46
HDAC6-201ENST00000334136 PFDN4Q9NQP4 134 aa12.19□□□□□ -0.46
HDAC6-201ENST00000334136 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP12.19□□□□□ -0.46
HDAC6-201ENST00000334136 SENP1Q9P0U3 644 aa12.19□□□□□ -0.46
HDAC6-201ENST00000334136 CHMP2BQ9UQN3 213 aa12.19□□□□□ -0.46
HDAC6-201ENST00000334136 EVPLQ92817 2033 aa12.18□□□□□ -0.46
HDAC6-201ENST00000334136 LOC100653049A0A140TA62 436 aa12.18□□□□□ -0.46
HDAC6-201ENST00000334136 KRT34O76011 436 aa12.18□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 31.9 ms