RNA–Protein interactions for RNA: ENST00000334060.8

SHOX-201, Transcript of short stature homeobox, humanhuman

TSL 5 BASIC

Gene SHOX, Length 1,951 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX-201ENST00000334060 GPR153Q6NV75 609 aa17.19■□□□□ 0.34
SHOX-201ENST00000334060 NT5DC3Q86UY8 548 aa17.19■□□□□ 0.34
SHOX-201ENST00000334060 RNF139Q8WU17 664 aa17.19■□□□□ 0.34
SHOX-201ENST00000334060 ALG3Q92685 438 aa17.19■□□□□ 0.34
SHOX-201ENST00000334060 FCRL2Q96LA5 508 aaPredicted RBP17.19■□□□□ 0.34
SHOX-201ENST00000334060 CNPY3Q9BT09 278 aa17.19■□□□□ 0.34
SHOX-201ENST00000334060 RPP25Q9BUL9 199 aaKnown RBP17.19■□□□□ 0.34
SHOX-201ENST00000334060 LUC7LQ9NQ29 371 aaKnown RBP17.19■□□□□ 0.34
SHOX-201ENST00000334060 COMMD8Q9NX08 183 aa17.19■□□□□ 0.34
SHOX-201ENST00000334060 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP17.19■□□□□ 0.34
SHOX-201ENST00000334060 UXTQ9UBK9 157 aaPredicted RBP17.19■□□□□ 0.34
SHOX-201ENST00000334060 FAM72CH0Y354 149 aa17.19■□□□□ 0.34
SHOX-201ENST00000334060 TRDMT1O14717 391 aaKnown RBP17.19■□□□□ 0.34
SHOX-201ENST00000334060 CKMP06732 381 aa17.19■□□□□ 0.34
SHOX-201ENST00000334060 FSHRP23945 695 aa17.19■□□□□ 0.34
SHOX-201ENST00000334060 SSR1P43307 286 aaKnown RBP17.19■□□□□ 0.34
SHOX-201ENST00000334060 IRAK1P51617 712 aa17.19■□□□□ 0.34
SHOX-201ENST00000334060 HADHBP55084 474 aaKnown RBP17.19■□□□□ 0.34
SHOX-201ENST00000334060 DEUP1Q05D60 604 aa17.19■□□□□ 0.34
SHOX-201ENST00000334060 FAM72AQ5TYM5 149 aa17.19■□□□□ 0.34
SHOX-201ENST00000334060 FAM72DQ6L9T8 149 aa17.19■□□□□ 0.34
SHOX-201ENST00000334060 PPP1R2P3Q6NXS1 205 aa17.19■□□□□ 0.34
SHOX-201ENST00000334060 MSANTD2Q6P1R3 559 aa17.19■□□□□ 0.34
SHOX-201ENST00000334060 SLFN11Q7Z7L1 901 aa17.19■□□□□ 0.34
SHOX-201ENST00000334060 FAM72BQ86X60 149 aa17.19■□□□□ 0.34
SHOX-201ENST00000334060 OVCA2Q8WZ82 227 aa17.19■□□□□ 0.34
SHOX-201ENST00000334060 MRPS31Q92665 395 aaKnown RBP17.19■□□□□ 0.34
SHOX-201ENST00000334060 GOLGA1Q92805 767 aa17.19■□□□□ 0.34
SHOX-201ENST00000334060 USP13Q92995 863 aaPredicted RBP17.19■□□□□ 0.34
SHOX-201ENST00000334060 KCND1Q9NSA2 647 aa17.19■□□□□ 0.34
SHOX-201ENST00000334060 PI4K2BG5E9Z4 385 aa17.18■□□□□ 0.34
SHOX-201ENST00000334060 SART1O43290 800 aaKnown RBP17.18■□□□□ 0.34
SHOX-201ENST00000334060 ATP1A1P05023 1023 aaKnown RBP17.18■□□□□ 0.34
SHOX-201ENST00000334060 CDC25CP30307 473 aa17.18■□□□□ 0.34
SHOX-201ENST00000334060 VCPP55072 806 aaKnown RBP17.18■□□□□ 0.34
SHOX-201ENST00000334060 SNX16P57768 344 aa17.18■□□□□ 0.34
SHOX-201ENST00000334060 DCAF12L1Q5VU92 463 aa17.18■□□□□ 0.34
SHOX-201ENST00000334060 NYAP1Q6ZVC0 841 aa17.18■□□□□ 0.34
SHOX-201ENST00000334060 NETO2Q8NC67 525 aa17.18■□□□□ 0.34
SHOX-201ENST00000334060 PDZD8Q8NEN9 1154 aa17.18■□□□□ 0.34
SHOX-201ENST00000334060 ANKRD7Q92527 254 aa17.18■□□□□ 0.34
SHOX-201ENST00000334060 CD101Q93033 1021 aa17.18■□□□□ 0.34
SHOX-201ENST00000334060 HERPUD2Q9BSE4 406 aa17.18■□□□□ 0.34
SHOX-201ENST00000334060 KLF16Q9BXK1 252 aaPredicted RBP17.18■□□□□ 0.34
SHOX-201ENST00000334060 NACA2Q9H009 215 aa17.18■□□□□ 0.34
SHOX-201ENST00000334060 OGFRQ9NZT2 677 aa17.18■□□□□ 0.34
SHOX-201ENST00000334060 IP6K2Q9UHH9 426 aa17.18■□□□□ 0.34
SHOX-201ENST00000334060 DENND4AQ7Z401 1863 aa17.18■□□□□ 0.34
SHOX-201ENST00000334060 STC2O76061 302 aa17.17■□□□□ 0.34
SHOX-201ENST00000334060 RALAP11233 206 aa17.17■□□□□ 0.34
SHOX-201ENST00000334060 ATP5C1P36542 298 aaKnown RBP17.17■□□□□ 0.34
SHOX-201ENST00000334060 GNG11P61952 73 aa17.17■□□□□ 0.34
SHOX-201ENST00000334060 FAM78AQ5JUQ0 283 aa17.17■□□□□ 0.34
SHOX-201ENST00000334060 NADSYN1Q6IA69 706 aa17.17■□□□□ 0.34
SHOX-201ENST00000334060 ARCQ7LC44 396 aa17.17■□□□□ 0.34
SHOX-201ENST00000334060 ARID3BQ8IVW6 561 aaPredicted RBP17.17■□□□□ 0.34
SHOX-201ENST00000334060 CMTM8Q8IZV2 173 aa17.17■□□□□ 0.34
SHOX-201ENST00000334060 GADD45GIP1Q8TAE8 222 aaPredicted RBP17.17■□□□□ 0.34
SHOX-201ENST00000334060 ZSCAN18Q8TBC5 510 aaPredicted RBP17.17■□□□□ 0.34
SHOX-201ENST00000334060 FNIP1Q8TF40 1166 aa17.17■□□□□ 0.34
SHOX-201ENST00000334060 SLC39A13Q96H72 371 aa17.17■□□□□ 0.34
SHOX-201ENST00000334060 SNRNP25Q9BV90 132 aaKnown RBP17.17■□□□□ 0.34
SHOX-201ENST00000334060 TSGA10Q9BZW7 698 aa17.17■□□□□ 0.34
SHOX-201ENST00000334060 EHD2Q9NZN4 543 aa17.17■□□□□ 0.34
SHOX-201ENST00000334060 DPP7Q9UHL4 492 aa17.17■□□□□ 0.34
SHOX-201ENST00000334060 CD207Q9UJ71 328 aa17.17■□□□□ 0.34
SHOX-201ENST00000334060 ENDOD1O94919 500 aa17.17■□□□□ 0.34
SHOX-201ENST00000334060 POU2F2P09086 479 aa17.17■□□□□ 0.34
SHOX-201ENST00000334060 CXCR5P32302 372 aa17.17■□□□□ 0.34
SHOX-201ENST00000334060 RDXP35241 583 aaKnown RBP17.17■□□□□ 0.34
SHOX-201ENST00000334060 SGSHP51688 502 aa17.17■□□□□ 0.34
SHOX-201ENST00000334060 ZNF211Q13398 564 aaPredicted RBP17.17■□□□□ 0.34
SHOX-201ENST00000334060 C11orf63Q6NUN7 778 aa17.17■□□□□ 0.34
SHOX-201ENST00000334060 NIPA2Q8N8Q9 360 aa17.17■□□□□ 0.34
SHOX-201ENST00000334060 SUSD6Q92537 303 aa17.17■□□□□ 0.34
SHOX-201ENST00000334060 TLR10Q9BXR5 811 aa17.17■□□□□ 0.34
SHOX-201ENST00000334060 TKTL2Q9H0I9 626 aa17.17■□□□□ 0.34
SHOX-201ENST00000334060 SMARCAL1Q9NZC9 954 aa17.17■□□□□ 0.34
SHOX-201ENST00000334060 DNMT3LQ9UJW3 386 aa17.17■□□□□ 0.34
SHOX-201ENST00000334060 USP18Q9UMW8 372 aa17.17■□□□□ 0.34
SHOX-201ENST00000334060 DDX3YO15523 660 aaKnown RBP17.16■□□□□ 0.34
SHOX-201ENST00000334060 CTIFO43310 598 aaKnown RBP17.16■□□□□ 0.34
SHOX-201ENST00000334060 SPOPO43791 374 aa17.16■□□□□ 0.34
SHOX-201ENST00000334060 SRGAP2O75044 1071 aa17.16■□□□□ 0.34
SHOX-201ENST00000334060 RARAP10276 462 aa17.16■□□□□ 0.34
SHOX-201ENST00000334060 HOXB8P17481 243 aaPredicted RBP17.16■□□□□ 0.34
SHOX-201ENST00000334060 FCARP24071 287 aa17.16■□□□□ 0.34
SHOX-201ENST00000334060 TBX4P57082 545 aa17.16■□□□□ 0.34
SHOX-201ENST00000334060 RTL10Q7L3V2 364 aa17.16■□□□□ 0.34
SHOX-201ENST00000334060 C14orf80Q86SX3 495 aa17.16■□□□□ 0.34
SHOX-201ENST00000334060 ARHGAP18Q8N392 663 aa17.16■□□□□ 0.34
SHOX-201ENST00000334060 RSAD2Q8WXG1 361 aa17.16■□□□□ 0.34
SHOX-201ENST00000334060 RAPGEF5Q92565 580 aa17.16■□□□□ 0.34
SHOX-201ENST00000334060 HSPH1Q92598 858 aa17.16■□□□□ 0.34
SHOX-201ENST00000334060 ZFYVE19Q96K21 471 aa17.16■□□□□ 0.34
SHOX-201ENST00000334060 PLA2G2FQ9BZM2 168 aa17.16■□□□□ 0.34
SHOX-201ENST00000334060 TASP1Q9H6P5 420 aa17.16■□□□□ 0.34
SHOX-201ENST00000334060 STAP1Q9ULZ2 295 aa17.16■□□□□ 0.34
SHOX-201ENST00000334060 MFHAS1Q9Y4C4 1052 aa17.16■□□□□ 0.34
SHOX-201ENST00000334060 MBTPS2O43462 519 aa17.15■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms