RNA–Protein interactions for RNA: ENST00000333235.3

CSPG4P4Y-201, Transcript of CSPG4 pseudogene 4 Y-linked, humanhuman

BASIC

Gene CSPG4P4Y, Length 3,724 nt, Biotype unprocessed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSPG4P4Y-201ENST00000333235 DSTYKQ6XUX3 929 aa12.08□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 ZNF410Q86VK4 478 aa12.08□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 TMPRSS6Q8IU80 811 aa12.08□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 PPTC7Q8NI37 304 aa12.08□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 CSPG4P5Q96PW8 444 aa12.08□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 MIPEPQ99797 713 aa12.08□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 ZFATQ9P243 1243 aa12.08□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 KANSL3Q9P2N6 904 aa12.08□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 PCDHA11Q9Y5I1 949 aa12.08□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 PARP14Q460N5 1801 aa12.08□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 SSC5DA1L4H1 1573 aa12.08□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 CREB3O43889 395 aa12.08□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 ITGBL1O95965 494 aaPredicted RBP12.08□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 PFKMP08237 780 aa12.08□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 CCDC130P13994 396 aa12.08□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 GM2AP17900 193 aa12.08□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 GARSP41250 739 aaKnown RBP12.08□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 ADCYAP1R1P41586 468 aa12.08□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 PTPN9P43378 593 aa12.08□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 IFRD2Q12894 506 aaPredicted RBP12.08□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 SMAD1Q15797 465 aaKnown RBP12.08□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 DPYSL2Q16555 572 aa12.08□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 EFHC1Q5JVL4 640 aa12.08□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 NOTUMQ6P988 496 aa12.08□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 SLC27A1Q6PCB7 646 aa12.08□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 HACE1Q8IYU2 909 aa12.08□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 CXorf38Q8TB03 319 aa12.08□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 SREK1Q8WXA9 508 aaKnown RBP12.08□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 USP6NLQ92738 828 aa12.08□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 TLE6Q9H808 572 aa12.08□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 THAP1Q9NVV9 213 aa12.08□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 APOBEC2Q9Y235 224 aaKnown RBP12.08□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 HES2Q9Y543 173 aa12.08□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 WDR27A2RRH5 827 aa12.07□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 RFPL1O75677 317 aa12.07□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 L1CAMP32004 1257 aa12.07□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 CRHR1P34998 444 aa12.07□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 GCKP35557 465 aa12.07□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 SULT1E1P49888 294 aa12.07□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 ATXN1P54253 815 aaKnown RBP12.07□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 PPIL2Q13356 520 aa12.07□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 THOC5Q13769 683 aaKnown RBP12.07□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 DCAF6Q58WW2 860 aa12.07□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 FBXO47Q5MNV8 452 aa12.07□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 ZCCHC23Q6ZST2 131 aa12.07□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 SLC26A9Q7LBE3 791 aa12.07□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 ENDOVQ8N8Q3 282 aaKnown RBP12.07□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 ANKRD52Q8NB46 1076 aa12.07□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 COLGALT1Q8NBJ5 622 aa12.07□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 GPRC5AQ8NFJ5 357 aa12.07□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 PGBD4Q96DM1 585 aa12.07□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 ZNF560Q96MR9 790 aa12.07□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 TRIM56Q9BRZ2 755 aaKnown RBP12.07□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 MMADHCQ9H3L0 296 aaPredicted RBP12.07□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 LRRC4Q9HBW1 653 aa12.07□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 VTA1Q9NP79 307 aa12.07□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 UBQLN1Q9UMX0 589 aaKnown RBP12.07□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 ARHGAP42A6NI28 874 aa12.07□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 HUS1O60921 280 aa12.07□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 DNAL1Q4LDG9 190 aa12.07□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 SNX30Q5VWJ9 437 aa12.07□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 KYAT3Q6YP21 454 aaKnown RBP12.07□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 MPP5Q8N3R9 675 aa12.07□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 LRRC52Q8N7C0 313 aa12.07□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 APPL2Q8NEU8 664 aa12.07□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 PTCD3Q96EY7 689 aaKnown RBP12.07□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 TNIP3Q96KP6 325 aa12.07□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 SIGLEC10Q96LC7 697 aa12.07□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 VCXQ9H320 206 aa12.07□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 KCNK13Q9HB14 408 aa12.07□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 RNF19AQ9NV58 838 aa12.07□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 TUBGCP4Q9UGJ1 667 aa12.07□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 COL1A2P08123 1366 aa12.07□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 A0A0A0MRY4 1105 aa12.07□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 BIRC5O15392 142 aa12.07□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 CD4P01730 458 aa12.07□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 BPGMP07738 259 aa12.07□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 GOT1P17174 413 aa12.07□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 GNAZP19086 355 aa12.07□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 ATP6V1C1P21283 382 aa12.07□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 TYK2P29597 1187 aa12.07□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 CRADDP78560 199 aa12.07□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 KLC1Q07866 573 aa12.07□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 FASTKD1Q53R41 847 aaKnown RBP12.07□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 CFAP157Q5JU67 520 aa12.07□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 RINLQ6ZS11 566 aa12.07□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 PDZD4Q76G19 769 aaPredicted RBP12.07□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 CCNJLQ8IV13 435 aa12.07□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 CLEC4CQ8WTT0 213 aa12.07□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 C18orf25Q96B23 403 aaPredicted RBP12.07□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 SPATA13Q96N96 652 aa12.07□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 THTPAQ9BU02 230 aa12.07□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 PIH1D1Q9NWS0 290 aaKnown RBP12.07□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 CNTN3Q9P232 1028 aa12.07□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 STAP1Q9ULZ2 295 aa12.07□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 DERAQ9Y315 318 aa12.07□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 PPEF2O14830 753 aa12.06□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 PPP1R12AO14974 1030 aaPredicted RBP12.06□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 MAP3K7O43318 606 aa12.06□□□□□ -0.48
CSPG4P4Y-201ENST00000333235 GLRA3O75311 464 aa12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 59.1 ms