RNA–Protein interactions for RNA: ENST00000331433.4

CLCNKA-201, Transcript of chloride voltage-gated channel Ka, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene CLCNKA, Length 2,475 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCNKA-201ENST00000331433 NME3Q13232 169 aa15.37■□□□□ 0.05
CLCNKA-201ENST00000331433 UNC5AQ6ZN44 842 aa15.37■□□□□ 0.05
CLCNKA-201ENST00000331433 SH2D5Q6ZV89 423 aa15.37■□□□□ 0.05
CLCNKA-201ENST00000331433 LRRC6Q86X45 466 aa15.37■□□□□ 0.05
CLCNKA-201ENST00000331433 MCUQ8NE86 351 aa15.37■□□□□ 0.05
CLCNKA-201ENST00000331433 FAM111AQ96PZ2 611 aa15.37■□□□□ 0.05
CLCNKA-201ENST00000331433 CEP41Q9BYV8 373 aa15.37■□□□□ 0.05
CLCNKA-201ENST00000331433 CHKBQ9Y259 395 aa15.37■□□□□ 0.05
CLCNKA-201ENST00000331433 TRIM49D1C9J1S8 452 aa15.37■□□□□ 0.05
CLCNKA-201ENST00000331433 MGRN1O60291 552 aa15.37■□□□□ 0.05
CLCNKA-201ENST00000331433 DAB1O75553 588 aa15.37■□□□□ 0.05
CLCNKA-201ENST00000331433 CTSHP09668 335 aa15.37■□□□□ 0.05
CLCNKA-201ENST00000331433 HOXC8P31273 242 aa15.37■□□□□ 0.05
CLCNKA-201ENST00000331433 MAGEA3P43357 314 aa15.37■□□□□ 0.05
CLCNKA-201ENST00000331433 OVGP1Q12889 678 aa15.37■□□□□ 0.05
CLCNKA-201ENST00000331433 IRF5Q13568 498 aa15.37■□□□□ 0.05
CLCNKA-201ENST00000331433 SNCBQ16143 134 aa15.37■□□□□ 0.05
CLCNKA-201ENST00000331433 ICE2Q659A1 982 aa15.37■□□□□ 0.05
CLCNKA-201ENST00000331433 TRMT10BQ6PF06 316 aaKnown RBP15.37■□□□□ 0.05
CLCNKA-201ENST00000331433 NME8Q8N427 588 aa15.37■□□□□ 0.05
CLCNKA-201ENST00000331433 GSTCDQ8NEC7 633 aa15.37■□□□□ 0.05
CLCNKA-201ENST00000331433 TFB1MQ8WVM0 346 aaKnown RBP15.37■□□□□ 0.05
CLCNKA-201ENST00000331433 HTR3CQ8WXA8 447 aa15.37■□□□□ 0.05
CLCNKA-201ENST00000331433 LPPQ93052 612 aa15.37■□□□□ 0.05
CLCNKA-201ENST00000331433 ERP27Q96DN0 273 aa15.37■□□□□ 0.05
CLCNKA-201ENST00000331433 APOPT1Q96IL0 206 aa15.37■□□□□ 0.05
CLCNKA-201ENST00000331433 SIGLEC10Q96LC7 697 aa15.37■□□□□ 0.05
CLCNKA-201ENST00000331433 OLFM3Q96PB7 478 aa15.37■□□□□ 0.05
CLCNKA-201ENST00000331433 DNAI2Q9GZS0 605 aa15.37■□□□□ 0.05
CLCNKA-201ENST00000331433 LRRC4Q9HBW1 653 aa15.37■□□□□ 0.05
CLCNKA-201ENST00000331433 NPHS2Q9NP85 383 aa15.37■□□□□ 0.05
CLCNKA-201ENST00000331433 KRT82Q9NSB4 513 aa15.37■□□□□ 0.05
CLCNKA-201ENST00000331433 PIH1D1Q9NWS0 290 aaKnown RBP15.37■□□□□ 0.05
CLCNKA-201ENST00000331433 CFAP73A6NFT4 308 aa15.36■□□□□ 0.05
CLCNKA-201ENST00000331433 M0QYT0 321 aa15.36■□□□□ 0.05
CLCNKA-201ENST00000331433 CREB3O43889 395 aa15.36■□□□□ 0.05
CLCNKA-201ENST00000331433 GNAT1P11488 350 aa15.36■□□□□ 0.05
CLCNKA-201ENST00000331433 NQO1P15559 274 aaKnown RBP15.36■□□□□ 0.05
CLCNKA-201ENST00000331433 NEK3P51956 506 aa15.36■□□□□ 0.05
CLCNKA-201ENST00000331433 CBLBQ13191 982 aa15.36■□□□□ 0.05
CLCNKA-201ENST00000331433 BMPR2Q13873 1038 aa15.36■□□□□ 0.05
CLCNKA-201ENST00000331433 CTU1Q7Z7A3 348 aaKnown RBP15.36■□□□□ 0.05
CLCNKA-201ENST00000331433 SIX6OS1Q8N1H7 587 aa15.36■□□□□ 0.05
CLCNKA-201ENST00000331433 ADAM32Q8TC27 787 aa15.36■□□□□ 0.05
CLCNKA-201ENST00000331433 RNF139Q8WU17 664 aa15.36■□□□□ 0.05
CLCNKA-201ENST00000331433 C10orf82Q8WW14 230 aa15.36■□□□□ 0.05
CLCNKA-201ENST00000331433 WNT8BQ93098 351 aa15.36■□□□□ 0.05
CLCNKA-201ENST00000331433 KLHL29Q96CT2 875 aa15.36■□□□□ 0.05
CLCNKA-201ENST00000331433 TSPAN18Q96SJ8 248 aa15.36■□□□□ 0.05
CLCNKA-201ENST00000331433 GAD1Q99259 594 aa15.36■□□□□ 0.05
CLCNKA-201ENST00000331433 TSPYL2Q9H2G4 693 aaPredicted RBP15.36■□□□□ 0.05
CLCNKA-201ENST00000331433 CRTAC1Q9NQ79 661 aa15.36■□□□□ 0.05
CLCNKA-201ENST00000331433 DDX43Q9NXZ2 648 aaKnown RBP15.36■□□□□ 0.05
CLCNKA-201ENST00000331433 CDY2AQ9Y6F7 541 aa15.36■□□□□ 0.05
CLCNKA-201ENST00000331433 USH1CQ9Y6N9 552 aa15.36■□□□□ 0.05
CLCNKA-201ENST00000331433 GABRDO14764 452 aa15.36■□□□□ 0.05
CLCNKA-201ENST00000331433 DGKIO75912 1065 aa15.36■□□□□ 0.05
CLCNKA-201ENST00000331433 APOEP02649 317 aa15.36■□□□□ 0.05
CLCNKA-201ENST00000331433 CSH1P0DML2 217 aa15.36■□□□□ 0.05
CLCNKA-201ENST00000331433 CSH2P0DML3 217 aa15.36■□□□□ 0.05
CLCNKA-201ENST00000331433 TPSB2P20231 275 aa15.36■□□□□ 0.05
CLCNKA-201ENST00000331433 PRKCHP24723 683 aa15.36■□□□□ 0.05
CLCNKA-201ENST00000331433 RGS2P41220 211 aa15.36■□□□□ 0.05
CLCNKA-201ENST00000331433 TKTL1P51854 596 aa15.36■□□□□ 0.05
CLCNKA-201ENST00000331433 SLC18A2Q05940 514 aa15.36■□□□□ 0.05
CLCNKA-201ENST00000331433 TPSAB1Q15661 275 aa15.36■□□□□ 0.05
CLCNKA-201ENST00000331433 ANKRD20A2Q5SQ80 823 aa15.36■□□□□ 0.05
CLCNKA-201ENST00000331433 ANKRD20A1Q5TYW2 823 aa15.36■□□□□ 0.05
CLCNKA-201ENST00000331433 ANKRD20A3Q5VUR7 823 aa15.36■□□□□ 0.05
CLCNKA-201ENST00000331433 CDHR3Q6ZTQ4 885 aa15.36■□□□□ 0.05
CLCNKA-201ENST00000331433 RNF169Q8NCN4 708 aa15.36■□□□□ 0.05
CLCNKA-201ENST00000331433 TTC17Q96AE7 1141 aa15.36■□□□□ 0.05
CLCNKA-201ENST00000331433 SENP8Q96LD8 212 aa15.36■□□□□ 0.05
CLCNKA-201ENST00000331433 MANSC1Q9H8J5 431 aa15.36■□□□□ 0.05
CLCNKA-201ENST00000331433 PIGVQ9NUD9 493 aa15.36■□□□□ 0.05
CLCNKA-201ENST00000331433 NRP1O14786 923 aa15.35■□□□□ 0.05
CLCNKA-201ENST00000331433 ALADP13716 330 aa15.35■□□□□ 0.05
CLCNKA-201ENST00000331433 NOS2P35228 1153 aa15.35■□□□□ 0.05
CLCNKA-201ENST00000331433 ETV4P43268 484 aa15.35■□□□□ 0.05
CLCNKA-201ENST00000331433 ZNF157P51786 506 aaPredicted RBP15.35■□□□□ 0.05
CLCNKA-201ENST00000331433 CLCNKBP51801 687 aa15.35■□□□□ 0.05
CLCNKA-201ENST00000331433 MRPS6P82932 125 aaKnown RBP15.35■□□□□ 0.05
CLCNKA-201ENST00000331433 CCDC15Q0P6D6 951 aa15.35■□□□□ 0.05
CLCNKA-201ENST00000331433 AP1B1Q10567 949 aa15.35■□□□□ 0.05
CLCNKA-201ENST00000331433 SEMA5AQ13591 1074 aa15.35■□□□□ 0.05
CLCNKA-201ENST00000331433 TTC39BQ5VTQ0 682 aaPredicted RBP15.35■□□□□ 0.05
CLCNKA-201ENST00000331433 C4orf22Q6V702 233 aa15.35■□□□□ 0.05
CLCNKA-201ENST00000331433 TP53INP2Q8IXH6 220 aa15.35■□□□□ 0.05
CLCNKA-201ENST00000331433 NT5C3BQ969T7 300 aa15.35■□□□□ 0.05
CLCNKA-201ENST00000331433 NPY6RQ99463 290 aa15.35■□□□□ 0.05
CLCNKA-201ENST00000331433 APBA2Q99767 749 aa15.35■□□□□ 0.05
CLCNKA-201ENST00000331433 EBNA1BP2Q99848 306 aaKnown RBP15.35■□□□□ 0.05
CLCNKA-201ENST00000331433 VPS11Q9H270 941 aa15.35■□□□□ 0.05
CLCNKA-201ENST00000331433 TMEM30AQ9NV96 361 aa15.35■□□□□ 0.05
CLCNKA-201ENST00000331433 ST3GAL5Q9UNP4 418 aa15.35■□□□□ 0.05
CLCNKA-201ENST00000331433 FAM200BP0CF97 657 aa15.35■□□□□ 0.05
CLCNKA-201ENST00000331433 IBSPP21815 317 aaPredicted RBP15.35■□□□□ 0.05
CLCNKA-201ENST00000331433 CRADDP78560 199 aa15.35■□□□□ 0.05
CLCNKA-201ENST00000331433 SETDB1Q15047 1291 aa15.35■□□□□ 0.05
CLCNKA-201ENST00000331433 PLEKHG4Q58EX7 1191 aa15.35■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 156.6 ms