RNA–Protein interactions for RNA: ENST00000329399.6

PDLIM1-201, Transcript of PDZ and LIM domain 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PDLIM1, Length 1,452 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM1-201ENST00000329399 CLEC20AQ6ZU45 233 aa17.16■□□□□ 0.34
PDLIM1-201ENST00000329399 MON1AQ86VX9 555 aa17.16■□□□□ 0.34
PDLIM1-201ENST00000329399 CMTM8Q8IZV2 173 aa17.16■□□□□ 0.34
PDLIM1-201ENST00000329399 USP13Q92995 863 aaPredicted RBP17.16■□□□□ 0.34
PDLIM1-201ENST00000329399 ZFYVE19Q96K21 471 aa17.16■□□□□ 0.34
PDLIM1-201ENST00000329399 HSFY1Q96LI6 401 aa17.16■□□□□ 0.34
PDLIM1-201ENST00000329399 WNT16Q9UBV4 365 aa17.16■□□□□ 0.34
PDLIM1-201ENST00000329399 CHORDC1Q9UHD1 332 aaPredicted RBP17.16■□□□□ 0.34
PDLIM1-201ENST00000329399 FBXL21Q9UKT6 434 aa17.16■□□□□ 0.34
PDLIM1-201ENST00000329399 OBSL1O75147 1896 aa17.15■□□□□ 0.34
PDLIM1-201ENST00000329399 GOLGA6L10A0A0M3HER8 536 aa17.15■□□□□ 0.34
PDLIM1-201ENST00000329399 ATMINO43313 823 aaPredicted RBP17.15■□□□□ 0.34
PDLIM1-201ENST00000329399 FGF19O95750 216 aa17.15■□□□□ 0.34
PDLIM1-201ENST00000329399 KRT3P12035 628 aa17.15■□□□□ 0.34
PDLIM1-201ENST00000329399 CD72P21854 359 aa17.15■□□□□ 0.34
PDLIM1-201ENST00000329399 CXCR5P32302 372 aa17.15■□□□□ 0.34
PDLIM1-201ENST00000329399 RPL34P49207 117 aaKnown RBP17.15■□□□□ 0.34
PDLIM1-201ENST00000329399 BST2Q10589 180 aaKnown RBP17.15■□□□□ 0.34
PDLIM1-201ENST00000329399 BRD3Q15059 726 aa17.15■□□□□ 0.34
PDLIM1-201ENST00000329399 ARHGAP15Q53QZ3 475 aa17.15■□□□□ 0.34
PDLIM1-201ENST00000329399 CWF19L1Q69YN2 538 aaKnown RBP17.15■□□□□ 0.34
PDLIM1-201ENST00000329399 ARCQ7LC44 396 aa17.15■□□□□ 0.34
PDLIM1-201ENST00000329399 TMEM110Q86TL2 294 aa17.15■□□□□ 0.34
PDLIM1-201ENST00000329399 MFSD6LQ8IWD5 586 aa17.15■□□□□ 0.34
PDLIM1-201ENST00000329399 RHOT1Q8IXI2 618 aa17.15■□□□□ 0.34
PDLIM1-201ENST00000329399 NUP93Q8N1F7 819 aa17.15■□□□□ 0.34
PDLIM1-201ENST00000329399 ARL14EPQ8N8R7 260 aaPredicted RBP17.15■□□□□ 0.34
PDLIM1-201ENST00000329399 SMARCD1Q96GM5 515 aa17.15■□□□□ 0.34
PDLIM1-201ENST00000329399 RUNDC3BQ96NL0 473 aa17.15■□□□□ 0.34
PDLIM1-201ENST00000329399 SLC4A5Q9BY07 1137 aa17.15■□□□□ 0.34
PDLIM1-201ENST00000329399 RNF38Q9H0F5 515 aa17.15■□□□□ 0.34
PDLIM1-201ENST00000329399 DMAP1Q9NPF5 467 aaPredicted RBP17.15■□□□□ 0.34
PDLIM1-201ENST00000329399 IL37Q9NZH6 218 aa17.15■□□□□ 0.34
PDLIM1-201ENST00000329399 TMEM59LQ9UK28 342 aa17.15■□□□□ 0.34
PDLIM1-201ENST00000329399 PACSIN2Q9UNF0 486 aaPredicted RBP17.15■□□□□ 0.34
PDLIM1-201ENST00000329399 ZNF840PA6NDX5 716 aa17.14■□□□□ 0.33
PDLIM1-201ENST00000329399 TULP2O00295 520 aa17.14■□□□□ 0.33
PDLIM1-201ENST00000329399 ARNTLO00327 626 aa17.14■□□□□ 0.33
PDLIM1-201ENST00000329399 PDE2AO00408 941 aaPredicted RBP17.14■□□□□ 0.33
PDLIM1-201ENST00000329399 PSMC3P17980 439 aa17.14■□□□□ 0.33
PDLIM1-201ENST00000329399 COL9A1P20849 921 aa17.14■□□□□ 0.33
PDLIM1-201ENST00000329399 GDI1P31150 447 aa17.14■□□□□ 0.33
PDLIM1-201ENST00000329399 SLC5A3P53794 718 aa17.14■□□□□ 0.33
PDLIM1-201ENST00000329399 GOLGA7BQ2TAP0 167 aa17.14■□□□□ 0.33
PDLIM1-201ENST00000329399 PTPN20Q4JDL3 420 aa17.14■□□□□ 0.33
PDLIM1-201ENST00000329399 SLC44A4Q53GD3 710 aa17.14■□□□□ 0.33
PDLIM1-201ENST00000329399 WDR93Q6P2C0 686 aa17.14■□□□□ 0.33
PDLIM1-201ENST00000329399 FBXL6Q8N531 539 aa17.14■□□□□ 0.33
PDLIM1-201ENST00000329399 SLC35F5Q8WV83 523 aa17.14■□□□□ 0.33
PDLIM1-201ENST00000329399 TRMT61BQ9BVS5 477 aaKnown RBP17.14■□□□□ 0.33
PDLIM1-201ENST00000329399 UBXN6Q9BZV1 441 aa17.14■□□□□ 0.33
PDLIM1-201ENST00000329399 TRPC7Q9HCX4 862 aa17.14■□□□□ 0.33
PDLIM1-201ENST00000329399 RAB21Q9UL25 225 aa17.14■□□□□ 0.33
PDLIM1-201ENST00000329399 MTF2Q9Y483 593 aaPredicted RBP17.14■□□□□ 0.33
PDLIM1-201ENST00000329399 CCDC151A5D8V7 595 aa17.13■□□□□ 0.33
PDLIM1-201ENST00000329399 ERLIN1O75477 346 aa17.13■□□□□ 0.33
PDLIM1-201ENST00000329399 WEE1P30291 646 aa17.13■□□□□ 0.33
PDLIM1-201ENST00000329399 TTC30AQ86WT1 665 aa17.13■□□□□ 0.33
PDLIM1-201ENST00000329399 XYLT1Q86Y38 959 aa17.13■□□□□ 0.33
PDLIM1-201ENST00000329399 TMEM105Q8N8V8 129 aa17.13■□□□□ 0.33
PDLIM1-201ENST00000329399 LRRN4CLQ8ND94 238 aa17.13■□□□□ 0.33
PDLIM1-201ENST00000329399 FLCNQ8NFG4 579 aa17.13■□□□□ 0.33
PDLIM1-201ENST00000329399 TTC8Q8TAM2 541 aa17.13■□□□□ 0.33
PDLIM1-201ENST00000329399 MRPS31Q92665 395 aaKnown RBP17.13■□□□□ 0.33
PDLIM1-201ENST00000329399 GCNAQ96QF7 691 aa17.13■□□□□ 0.33
PDLIM1-201ENST00000329399 PSMB7Q99436 277 aa17.13■□□□□ 0.33
PDLIM1-201ENST00000329399 HEBP1Q9NRV9 189 aa17.13■□□□□ 0.33
PDLIM1-201ENST00000329399 DDX56Q9NY93 547 aaKnown RBP17.13■□□□□ 0.33
PDLIM1-201ENST00000329399 UXTQ9UBK9 157 aaPredicted RBP17.13■□□□□ 0.33
PDLIM1-201ENST00000329399 TMEM110-MUSTN1A8MSY1 372 aa17.12■□□□□ 0.33
PDLIM1-201ENST00000329399 FAM200BP0CF97 657 aa17.12■□□□□ 0.33
PDLIM1-201ENST00000329399 H2AFXP16104 143 aaPredicted RBP17.12■□□□□ 0.33
PDLIM1-201ENST00000329399 YWHAQP27348 245 aa17.12■□□□□ 0.33
PDLIM1-201ENST00000329399 TNK2Q07912 1038 aa17.12■□□□□ 0.33
PDLIM1-201ENST00000329399 FCHO2Q0JRZ9 810 aa17.12■□□□□ 0.33
PDLIM1-201ENST00000329399 POLNQ7Z5Q5 900 aa17.12■□□□□ 0.33
PDLIM1-201ENST00000329399 KATNAL2Q8IYT4 538 aa17.12■□□□□ 0.33
PDLIM1-201ENST00000329399 HNRNPLLQ8WVV9 542 aaKnown RBP17.12■□□□□ 0.33
PDLIM1-201ENST00000329399 CEP295NLQ96MC4 621 aa17.12■□□□□ 0.33
PDLIM1-201ENST00000329399 CPXM1Q96SM3 734 aa17.12■□□□□ 0.33
PDLIM1-201ENST00000329399 DUSP16Q9BY84 665 aa17.12■□□□□ 0.33
PDLIM1-201ENST00000329399 FOXQ1Q9C009 403 aa17.12■□□□□ 0.33
PDLIM1-201ENST00000329399 GOLPH3Q9H4A6 298 aa17.12■□□□□ 0.33
PDLIM1-201ENST00000329399 ARHGEF3Q9NR81 526 aa17.12■□□□□ 0.33
PDLIM1-201ENST00000329399 HOMER3Q9NSC5 361 aa17.12■□□□□ 0.33
PDLIM1-201ENST00000329399 OSER1Q9NX31 292 aa17.12■□□□□ 0.33
PDLIM1-201ENST00000329399 GMIPQ9P107 970 aa17.12■□□□□ 0.33
PDLIM1-201ENST00000329399 FAM92AA1XBS5 289 aa17.12■□□□□ 0.33
PDLIM1-201ENST00000329399 OTOL1A6NHN0 477 aaPredicted RBP17.12■□□□□ 0.33
PDLIM1-201ENST00000329399 XPO1O14980 1071 aaKnown RBP17.12■□□□□ 0.33
PDLIM1-201ENST00000329399 GABBR2O75899 941 aa17.12■□□□□ 0.33
PDLIM1-201ENST00000329399 ERBB2P04626 1255 aa17.12■□□□□ 0.33
PDLIM1-201ENST00000329399 AVPR2P30518 371 aa17.12■□□□□ 0.33
PDLIM1-201ENST00000329399 PLA2G4AP47712 749 aa17.12■□□□□ 0.33
PDLIM1-201ENST00000329399 COPS2P61201 443 aa17.12■□□□□ 0.33
PDLIM1-201ENST00000329399 HADHQ16836 314 aaKnown RBP17.12■□□□□ 0.33
PDLIM1-201ENST00000329399 MAATS1Q7Z4T9 603 aa17.12■□□□□ 0.33
PDLIM1-201ENST00000329399 EIF1ADQ8N9N8 165 aaKnown RBP17.12■□□□□ 0.33
PDLIM1-201ENST00000329399 EXD1Q8NHP7 514 aa17.12■□□□□ 0.33
PDLIM1-201ENST00000329399 CCDC26Q8TAB7 109 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 18.8 ms