RNA–Protein interactions for RNA: ENST00000325110.10

HMGCS1-201, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene HMGCS1, Length 3,506 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-201ENST00000325110 ADAM32Q8TC27 787 aa13.31□□□□□ -0.28
HMGCS1-201ENST00000325110 MED10Q9BTT4 135 aa13.31□□□□□ -0.28
HMGCS1-201ENST00000325110 POPDC2Q9HBU9 364 aa13.31□□□□□ -0.28
HMGCS1-201ENST00000325110 TNFSF13BQ9Y275 285 aa13.31□□□□□ -0.28
HMGCS1-201ENST00000325110 KIAA1217Q5T5P2 1943 aa13.31□□□□□ -0.28
HMGCS1-201ENST00000325110 GOLGA8QA0A0J9YX86 632 aa13.31□□□□□ -0.28
HMGCS1-201ENST00000325110 GOLGA8OA6NCC3 632 aa13.31□□□□□ -0.28
HMGCS1-201ENST00000325110 SLC15A5A6NIM6 579 aa13.31□□□□□ -0.28
HMGCS1-201ENST00000325110 ADM5C9JUS6 153 aa13.31□□□□□ -0.28
HMGCS1-201ENST00000325110 GOLGA8NF8WBI6 632 aa13.31□□□□□ -0.28
HMGCS1-201ENST00000325110 TPP1O14773 563 aa13.31□□□□□ -0.28
HMGCS1-201ENST00000325110 TGFB3P10600 412 aa13.31□□□□□ -0.28
HMGCS1-201ENST00000325110 AKAP5P24588 427 aa13.31□□□□□ -0.28
HMGCS1-201ENST00000325110 BAG6P46379 1132 aa13.31□□□□□ -0.28
HMGCS1-201ENST00000325110 NEK3P51956 506 aa13.31□□□□□ -0.28
HMGCS1-201ENST00000325110 AP2B1P63010 937 aa13.31□□□□□ -0.28
HMGCS1-201ENST00000325110 IFRD2Q12894 506 aaPredicted RBP13.31□□□□□ -0.28
HMGCS1-201ENST00000325110 ITGA9Q13797 1035 aa13.31□□□□□ -0.28
HMGCS1-201ENST00000325110 TCHHL1Q5QJ38 904 aaPredicted RBP13.31□□□□□ -0.28
HMGCS1-201ENST00000325110 CMC1Q7Z7K0 106 aa13.31□□□□□ -0.28
HMGCS1-201ENST00000325110 CAND1Q86VP6 1230 aaKnown RBP13.31□□□□□ -0.28
HMGCS1-201ENST00000325110 TMPRSS6Q8IU80 811 aa13.31□□□□□ -0.28
HMGCS1-201ENST00000325110 TNS4Q8IZW8 715 aa13.31□□□□□ -0.28
HMGCS1-201ENST00000325110 AFG1LQ8WV93 481 aa13.31□□□□□ -0.28
HMGCS1-201ENST00000325110 SYT15Q9BQS2 421 aa13.31□□□□□ -0.28
HMGCS1-201ENST00000325110 SNX25Q9H3E2 840 aa13.31□□□□□ -0.28
HMGCS1-201ENST00000325110 RPS6KL1Q9Y6S9 549 aa13.31□□□□□ -0.28
HMGCS1-201ENST00000325110 DCAF8L1A6NGE4 600 aa13.31□□□□□ -0.28
HMGCS1-201ENST00000325110 E9PBE3 544 aa13.31□□□□□ -0.28
HMGCS1-201ENST00000325110 FAM189A1O60320 539 aa13.31□□□□□ -0.28
HMGCS1-201ENST00000325110 KLHL41O60662 606 aa13.31□□□□□ -0.28
HMGCS1-201ENST00000325110 LGR5O75473 907 aa13.31□□□□□ -0.28
HMGCS1-201ENST00000325110 HSPA4LO95757 839 aa13.31□□□□□ -0.28
HMGCS1-201ENST00000325110 GNAT1P11488 350 aa13.31□□□□□ -0.28
HMGCS1-201ENST00000325110 PDK2Q15119 407 aa13.31□□□□□ -0.28
HMGCS1-201ENST00000325110 RABGAP1LQ5R372 815 aa13.31□□□□□ -0.28
HMGCS1-201ENST00000325110 COLGALT1Q8NBJ5 622 aa13.31□□□□□ -0.28
HMGCS1-201ENST00000325110 KCNK13Q9HB14 408 aa13.31□□□□□ -0.28
HMGCS1-201ENST00000325110 TMPRSS4Q9NRS4 437 aa13.31□□□□□ -0.28
HMGCS1-201ENST00000325110 ZNF358Q9NW07 568 aa13.31□□□□□ -0.28
HMGCS1-201ENST00000325110 UBP1Q9NZI7 540 aa13.31□□□□□ -0.28
HMGCS1-201ENST00000325110 TAGLN3Q9UI15 199 aa13.31□□□□□ -0.28
HMGCS1-201ENST00000325110 CORO1CQ9ULV4 474 aaPredicted RBP13.31□□□□□ -0.28
HMGCS1-201ENST00000325110 LOXHD1Q8IVV2 1947 aa13.31□□□□□ -0.28
HMGCS1-201ENST00000325110 CYP3A5P20815 502 aa13.3□□□□□ -0.28
HMGCS1-201ENST00000325110 ADORA2AP29274 412 aa13.3□□□□□ -0.28
HMGCS1-201ENST00000325110 SULT1E1P49888 294 aa13.3□□□□□ -0.28
HMGCS1-201ENST00000325110 CTC1Q2NKJ3 1217 aa13.3□□□□□ -0.28
HMGCS1-201ENST00000325110 EXOC8Q8IYI6 725 aa13.3□□□□□ -0.28
HMGCS1-201ENST00000325110 PQLC3Q8N755 202 aa13.3□□□□□ -0.28
HMGCS1-201ENST00000325110 C18orf25Q96B23 403 aaPredicted RBP13.3□□□□□ -0.28
HMGCS1-201ENST00000325110 SKA1Q96BD8 255 aa13.3□□□□□ -0.28
HMGCS1-201ENST00000325110 ZNF669Q96BR6 464 aaPredicted RBP13.3□□□□□ -0.28
HMGCS1-201ENST00000325110 SCYL1Q96KG9 808 aa13.3□□□□□ -0.28
HMGCS1-201ENST00000325110 DPEP3Q9H4B8 488 aa13.3□□□□□ -0.28
HMGCS1-201ENST00000325110 USP29Q9HBJ7 922 aa13.3□□□□□ -0.28
HMGCS1-201ENST00000325110 SSU72Q9NP77 194 aaKnown RBP13.3□□□□□ -0.28
HMGCS1-201ENST00000325110 LRCH1Q9Y2L9 728 aa13.3□□□□□ -0.28
HMGCS1-201ENST00000325110 DGKIO75912 1065 aa13.3□□□□□ -0.28
HMGCS1-201ENST00000325110 ETV4P43268 484 aa13.3□□□□□ -0.28
HMGCS1-201ENST00000325110 SLC6A3Q01959 620 aa13.3□□□□□ -0.28
HMGCS1-201ENST00000325110 RIOX2Q8IUF8 465 aa13.3□□□□□ -0.28
HMGCS1-201ENST00000325110 ULK2Q8IYT8 1036 aa13.3□□□□□ -0.28
HMGCS1-201ENST00000325110 MZB1Q8WU39 189 aa13.3□□□□□ -0.28
HMGCS1-201ENST00000325110 EBNA1BP2Q99848 306 aaKnown RBP13.3□□□□□ -0.28
HMGCS1-201ENST00000325110 FZD8Q9H461 694 aa13.3□□□□□ -0.28
HMGCS1-201ENST00000325110 PNPOQ9NVS9 261 aa13.3□□□□□ -0.28
HMGCS1-201ENST00000325110 KCNK4Q9NYG8 393 aa13.3□□□□□ -0.28
HMGCS1-201ENST00000325110 PAPSS1O43252 624 aaPredicted RBP13.3□□□□□ -0.28
HMGCS1-201ENST00000325110 ITM2AO43736 263 aa13.3□□□□□ -0.28
HMGCS1-201ENST00000325110 PROCP04070 461 aa13.3□□□□□ -0.28
HMGCS1-201ENST00000325110 CALRP27797 417 aaKnown RBP13.3□□□□□ -0.28
HMGCS1-201ENST00000325110 RABGGTBP53611 331 aa13.3□□□□□ -0.28
HMGCS1-201ENST00000325110 CACNA2D1P54289 1103 aa13.3□□□□□ -0.28
HMGCS1-201ENST00000325110 ASPHQ12797 758 aa13.3□□□□□ -0.28
HMGCS1-201ENST00000325110 TTC30AQ86WT1 665 aa13.3□□□□□ -0.28
HMGCS1-201ENST00000325110 CHSY1Q86X52 802 aa13.3□□□□□ -0.28
HMGCS1-201ENST00000325110 CYP3A43Q9HB55 503 aa13.3□□□□□ -0.28
HMGCS1-201ENST00000325110 CYLDQ9NQC7 956 aa13.3□□□□□ -0.28
HMGCS1-201ENST00000325110 LNPEPQ9UIQ6 1025 aa13.3□□□□□ -0.28
HMGCS1-201ENST00000325110 GAS2O43903 313 aaKnown RBP13.29□□□□□ -0.28
HMGCS1-201ENST00000325110 ACAT1P24752 427 aaKnown RBP13.29□□□□□ -0.28
HMGCS1-201ENST00000325110 MRPS5P82675 430 aaKnown RBP13.29□□□□□ -0.28
HMGCS1-201ENST00000325110 ILDR2Q71H61 639 aa13.29□□□□□ -0.28
HMGCS1-201ENST00000325110 CCDC185Q8N715 623 aa13.29□□□□□ -0.28
HMGCS1-201ENST00000325110 TFB1MQ8WVM0 346 aaKnown RBP13.29□□□□□ -0.28
HMGCS1-201ENST00000325110 RNF34Q969K3 372 aa13.29□□□□□ -0.28
HMGCS1-201ENST00000325110 DCPSQ96C86 337 aaKnown RBP13.29□□□□□ -0.28
HMGCS1-201ENST00000325110 PTCD3Q96EY7 689 aaKnown RBP13.29□□□□□ -0.28
HMGCS1-201ENST00000325110 C12orf42Q96LP6 360 aa13.29□□□□□ -0.28
HMGCS1-201ENST00000325110 PDZD7Q9H5P4 517 aa13.29□□□□□ -0.28
HMGCS1-201ENST00000325110 TUBGCP4Q9UGJ1 667 aa13.29□□□□□ -0.28
HMGCS1-201ENST00000325110 HBS1LQ9Y450 684 aaKnown RBP13.29□□□□□ -0.28
HMGCS1-201ENST00000325110 RARBP10826 455 aa13.29□□□□□ -0.28
HMGCS1-201ENST00000325110 TGM2P21980 687 aa13.29□□□□□ -0.28
HMGCS1-201ENST00000325110 PSMB4P28070 264 aa13.29□□□□□ -0.28
HMGCS1-201ENST00000325110 SLC1A6P48664 564 aa13.29□□□□□ -0.28
HMGCS1-201ENST00000325110 SNX16P57768 344 aa13.29□□□□□ -0.28
HMGCS1-201ENST00000325110 SLC18A2Q05940 514 aa13.29□□□□□ -0.28
HMGCS1-201ENST00000325110 RALGPS1Q5JS13 557 aa13.29□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms