RNA–Protein interactions for RNA: ENST00000317516.11

TPM1-203, Transcript of tropomyosin 1, humanhuman

TSL 1 (best) BASIC

Gene TPM1, Length 738 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-203ENST00000317516 FBXO21O94952 628 aa18.55■□□□□ 0.56
TPM1-203ENST00000317516 BRD2P25440 801 aaKnown RBP18.55■□□□□ 0.56
TPM1-203ENST00000317516 RGS7P49802 495 aa18.55■□□□□ 0.56
TPM1-203ENST00000317516 ZNF132P52740 706 aa18.55■□□□□ 0.56
TPM1-203ENST00000317516 DAOAP59103 153 aa18.55■□□□□ 0.56
TPM1-203ENST00000317516 MAP7D1Q3KQU3 841 aa18.55■□□□□ 0.56
TPM1-203ENST00000317516 MPPE1Q53F39 396 aa18.55■□□□□ 0.56
TPM1-203ENST00000317516 STPG1Q5TH74 334 aa18.55■□□□□ 0.56
TPM1-203ENST00000317516 RNF43Q68DV7 783 aa18.55■□□□□ 0.56
TPM1-203ENST00000317516 PMF1Q6P1K2 205 aa18.55■□□□□ 0.56
TPM1-203ENST00000317516 ENOSF1Q7L5Y1 443 aa18.55■□□□□ 0.56
TPM1-203ENST00000317516 IPO4Q8TEX9 1081 aaKnown RBP18.55■□□□□ 0.56
TPM1-203ENST00000317516 INTS2Q9H0H0 1204 aaKnown RBP18.55■□□□□ 0.56
TPM1-203ENST00000317516 SMOC1Q9H4F8 434 aa18.55■□□□□ 0.56
TPM1-203ENST00000317516 UBE2TQ9NPD8 197 aaPredicted RBP18.55■□□□□ 0.56
TPM1-203ENST00000317516 SFMBT1Q9UHJ3 866 aa18.55■□□□□ 0.56
TPM1-203ENST00000317516 HCN2Q9UL51 889 aa18.55■□□□□ 0.56
TPM1-203ENST00000317516 A0A1W2PQF6 199 aa18.54■□□□□ 0.56
TPM1-203ENST00000317516 AP5Z1O43299 807 aa18.54■□□□□ 0.56
TPM1-203ENST00000317516 MED7O43513 233 aa18.54■□□□□ 0.56
TPM1-203ENST00000317516 LATS1O95835 1130 aa18.54■□□□□ 0.56
TPM1-203ENST00000317516 KRT5P13647 590 aa18.54■□□□□ 0.56
TPM1-203ENST00000317516 GABRG2P18507 467 aa18.54■□□□□ 0.56
TPM1-203ENST00000317516 MFAP3P55082 362 aa18.54■□□□□ 0.56
TPM1-203ENST00000317516 STARD3Q14849 445 aa18.54■□□□□ 0.56
TPM1-203ENST00000317516 ARHGEF19Q8IW93 802 aa18.54■□□□□ 0.56
TPM1-203ENST00000317516 UNC45BQ8IWX7 931 aa18.54■□□□□ 0.56
TPM1-203ENST00000317516 FAM217AQ8IXS0 508 aa18.54■□□□□ 0.56
TPM1-203ENST00000317516 MLKLQ8NB16 471 aa18.54■□□□□ 0.56
TPM1-203ENST00000317516 PIGKQ92643 395 aa18.54■□□□□ 0.56
TPM1-203ENST00000317516 ACOX2Q99424 681 aa18.54■□□□□ 0.56
TPM1-203ENST00000317516 CNTN6Q9UQ52 1028 aa18.54■□□□□ 0.56
TPM1-203ENST00000317516 MYOFQ9NZM1 2061 aa18.53■□□□□ 0.56
TPM1-203ENST00000317516 MSANTD3-TMEFF1A0A0A6YYJ0 341 aa18.53■□□□□ 0.56
TPM1-203ENST00000317516 SART1O43290 800 aaKnown RBP18.53■□□□□ 0.56
TPM1-203ENST00000317516 ACADSBP45954 432 aa18.53■□□□□ 0.56
TPM1-203ENST00000317516 ARID5AQ03989 594 aa18.53■□□□□ 0.56
TPM1-203ENST00000317516 EIF4HQ15056 248 aaKnown RBP18.53■□□□□ 0.56
TPM1-203ENST00000317516 PPM1JQ5JR12 505 aa18.53■□□□□ 0.56
TPM1-203ENST00000317516 ADGRF1Q5T601 910 aa18.53■□□□□ 0.56
TPM1-203ENST00000317516 ANKS1BQ7Z6G8 1248 aa18.53■□□□□ 0.56
TPM1-203ENST00000317516 TMEFF1Q8IYR6 380 aa18.53■□□□□ 0.56
TPM1-203ENST00000317516 TMA16Q96EY4 203 aaKnown RBP18.53■□□□□ 0.56
TPM1-203ENST00000317516 KREMEN1Q96MU8 473 aa18.53■□□□□ 0.56
TPM1-203ENST00000317516 ZSWIM1Q9BR11 485 aa18.53■□□□□ 0.56
TPM1-203ENST00000317516 RXFP3Q9NSD7 469 aa18.53■□□□□ 0.56
TPM1-203ENST00000317516 CACNA2D2Q9NY47 1150 aa18.53■□□□□ 0.56
TPM1-203ENST00000317516 CALCOCO1Q9P1Z2 691 aa18.53■□□□□ 0.56
TPM1-203ENST00000317516 STON1Q9Y6Q2 735 aa18.53■□□□□ 0.56
TPM1-203ENST00000317516 LTFP02788 710 aa18.52■□□□□ 0.56
TPM1-203ENST00000317516 SLC11A2P49281 568 aa18.52■□□□□ 0.56
TPM1-203ENST00000317516 TPD52L1Q16890 204 aaPredicted RBP18.52■□□□□ 0.56
TPM1-203ENST00000317516 GEN1Q17RS7 908 aa18.52■□□□□ 0.56
TPM1-203ENST00000317516 LYSMD4Q5XG99 296 aa18.52■□□□□ 0.56
TPM1-203ENST00000317516 NUGGCQ68CJ6 796 aa18.52■□□□□ 0.56
TPM1-203ENST00000317516 TCEAL6Q6IPX3 200 aa18.52■□□□□ 0.56
TPM1-203ENST00000317516 MSANTD2Q6P1R3 559 aa18.52■□□□□ 0.56
TPM1-203ENST00000317516 SYT12Q8IV01 421 aa18.52■□□□□ 0.56
TPM1-203ENST00000317516 TCEAL3Q969E4 200 aa18.52■□□□□ 0.56
TPM1-203ENST00000317516 PIWIL1Q96J94 861 aaKnown RBP18.52■□□□□ 0.56
TPM1-203ENST00000317516 EDEM2Q9BV94 578 aa18.52■□□□□ 0.56
TPM1-203ENST00000317516 TRIM62Q9BVG3 475 aa18.52■□□□□ 0.56
TPM1-203ENST00000317516 IRX2Q9BZI1 471 aaPredicted RBP18.52■□□□□ 0.56
TPM1-203ENST00000317516 MIS12Q9H081 205 aa18.52■□□□□ 0.56
TPM1-203ENST00000317516 ST7Q9NRC1 585 aa18.52■□□□□ 0.56
TPM1-203ENST00000317516 ELOVL2Q9NXB9 296 aa18.52■□□□□ 0.56
TPM1-203ENST00000317516 THAP10Q9P2Z0 257 aaPredicted RBP18.52■□□□□ 0.56
TPM1-203ENST00000317516 MBD1Q9UIS9 605 aaPredicted RBP18.52■□□□□ 0.56
TPM1-203ENST00000317516 STOML2Q9UJZ1 356 aa18.52■□□□□ 0.56
TPM1-203ENST00000317516 PIK3R2O00459 728 aa18.51■□□□□ 0.55
TPM1-203ENST00000317516 SYNCRIPO60506 623 aaKnown RBP18.51■□□□□ 0.55
TPM1-203ENST00000317516 GPD2P43304 727 aa18.51■□□□□ 0.55
TPM1-203ENST00000317516 RPL6Q02878 288 aaKnown RBP18.51■□□□□ 0.55
TPM1-203ENST00000317516 LMAN2Q12907 356 aa18.51■□□□□ 0.55
TPM1-203ENST00000317516 MEA1Q16626 185 aa18.51■□□□□ 0.55
TPM1-203ENST00000317516 DAB2IPQ5VWQ8 1189 aa18.51■□□□□ 0.55
TPM1-203ENST00000317516 KIAA1211LQ6NV74 962 aa18.51■□□□□ 0.55
TPM1-203ENST00000317516 GBP6Q6ZN66 633 aa18.51■□□□□ 0.55
TPM1-203ENST00000317516 FRMD1Q8N878 549 aa18.51■□□□□ 0.55
TPM1-203ENST00000317516 STK32AQ8WU08 396 aa18.51■□□□□ 0.55
TPM1-203ENST00000317516 NUSAP1Q9BXS6 441 aaKnown RBP18.51■□□□□ 0.55
TPM1-203ENST00000317516 CIPCQ9C0C6 399 aa18.51■□□□□ 0.55
TPM1-203ENST00000317516 EVLQ9UI08 416 aaPredicted RBP18.51■□□□□ 0.55
TPM1-203ENST00000317516 RAD54BQ9Y620 910 aa18.51■□□□□ 0.55
TPM1-203ENST00000317516 SPAG17Q6Q759 2223 aa18.51■□□□□ 0.55
TPM1-203ENST00000317516 NCOR2Q9Y618 2525 aa18.5■□□□□ 0.55
TPM1-203ENST00000317516 WASH3PC4AMC7 463 aa18.5■□□□□ 0.55
TPM1-203ENST00000317516 TM4SF5O14894 197 aa18.5■□□□□ 0.55
TPM1-203ENST00000317516 MSI1O43347 362 aaKnown RBP18.5■□□□□ 0.55
TPM1-203ENST00000317516 TSPAN3O60637 253 aa18.5■□□□□ 0.55
TPM1-203ENST00000317516 GABBR2O75899 941 aa18.5■□□□□ 0.55
TPM1-203ENST00000317516 LETM1O95202 739 aaPredicted RBP18.5■□□□□ 0.55
TPM1-203ENST00000317516 NCAM1P13591 858 aa18.5■□□□□ 0.55
TPM1-203ENST00000317516 NDUFV2P19404 249 aa18.5■□□□□ 0.55
TPM1-203ENST00000317516 HOXD12P35452 270 aa18.5■□□□□ 0.55
TPM1-203ENST00000317516 PTGER3P43115 390 aa18.5■□□□□ 0.55
TPM1-203ENST00000317516 TBX4P57082 545 aa18.5■□□□□ 0.55
TPM1-203ENST00000317516 RING1Q06587 406 aa18.5■□□□□ 0.55
TPM1-203ENST00000317516 SMYD5Q6GMV2 418 aa18.5■□□□□ 0.55
TPM1-203ENST00000317516 ARMCX6Q7L4S7 300 aa18.5■□□□□ 0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms