RNA–Protein interactions for RNA: ENST00000315554.12

CDC42-201, Transcript of cell division cycle 42, humanhuman

APPRIS P5 TSL 1 (best) BASIC

Gene CDC42, Length 1,452 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC42-201ENST00000315554 IQCDQ96DY2 449 aa8.2□□□□□ -1.1
CDC42-201ENST00000315554 MRFAP1L1Q96HT8 127 aa8.2□□□□□ -1.1
CDC42-201ENST00000315554 DNAJC7Q99615 494 aa8.2□□□□□ -1.1
CDC42-201ENST00000315554 NUCKS1Q9H1E3 243 aaKnown RBP8.2□□□□□ -1.1
CDC42-201ENST00000315554 POPDC2Q9HBU9 364 aa8.2□□□□□ -1.1
CDC42-201ENST00000315554 HPS4Q9NQG7 708 aa8.2□□□□□ -1.1
CDC42-201ENST00000315554 SLC2A4RGQ9NR83 387 aa8.2□□□□□ -1.1
CDC42-201ENST00000315554 ABHD10Q9NUJ1 306 aa8.2□□□□□ -1.1
CDC42-201ENST00000315554 THG1LQ9NWX6 298 aaKnown RBP8.2□□□□□ -1.1
CDC42-201ENST00000315554 ADAMTS1Q9UHI8 967 aa8.2□□□□□ -1.1
CDC42-201ENST00000315554 STRIP2Q9ULQ0 834 aa8.2□□□□□ -1.1
CDC42-201ENST00000315554 NCOR1O75376 2440 aa8.2□□□□□ -1.1
CDC42-201ENST00000315554 A0A087X0T9 212 aa8.19□□□□□ -1.1
CDC42-201ENST00000315554 ARNTLO00327 626 aa8.19□□□□□ -1.1
CDC42-201ENST00000315554 TRDMT1O14717 391 aaKnown RBP8.19□□□□□ -1.1
CDC42-201ENST00000315554 CHADO15335 359 aa8.19□□□□□ -1.1
CDC42-201ENST00000315554 GREM1O60565 184 aa8.19□□□□□ -1.1
CDC42-201ENST00000315554 HSF2BPO75031 334 aa8.19□□□□□ -1.1
CDC42-201ENST00000315554 DAB1O75553 588 aa8.19□□□□□ -1.1
CDC42-201ENST00000315554 TRUB2O95900 331 aaKnown RBP8.19□□□□□ -1.1
CDC42-201ENST00000315554 MOCS2O96007 188 aaPredicted RBP8.19□□□□□ -1.1
CDC42-201ENST00000315554 KLKB1P03952 638 aa8.19□□□□□ -1.1
CDC42-201ENST00000315554 FAM228BP0C875 321 aa8.19□□□□□ -1.1
CDC42-201ENST00000315554 ALADP13716 330 aa8.19□□□□□ -1.1
CDC42-201ENST00000315554 TCF3P15923 654 aa8.19□□□□□ -1.1
CDC42-201ENST00000315554 RRM1P23921 792 aa8.19□□□□□ -1.1
CDC42-201ENST00000315554 CORO1AP31146 461 aaKnown RBP8.19□□□□□ -1.1
CDC42-201ENST00000315554 FLT3P36888 993 aa8.19□□□□□ -1.1
CDC42-201ENST00000315554 SULT1E1P49888 294 aa8.19□□□□□ -1.1
CDC42-201ENST00000315554 KPNA1P52294 538 aaPredicted RBP8.19□□□□□ -1.1
CDC42-201ENST00000315554 TBX4P57082 545 aa8.19□□□□□ -1.1
CDC42-201ENST00000315554 SNX16P57768 344 aa8.19□□□□□ -1.1
CDC42-201ENST00000315554 SIGLEC14Q08ET2 396 aa8.19□□□□□ -1.1
CDC42-201ENST00000315554 NME3Q13232 169 aa8.19□□□□□ -1.1
CDC42-201ENST00000315554 ARID5BQ14865 1188 aa8.19□□□□□ -1.1
CDC42-201ENST00000315554 EML3Q32P44 896 aa8.19□□□□□ -1.1
CDC42-201ENST00000315554 SLC44A4Q53GD3 710 aa8.19□□□□□ -1.1
CDC42-201ENST00000315554 RAB6CQ53S08 254 aa8.19□□□□□ -1.1
CDC42-201ENST00000315554 EFHC1Q5JVL4 640 aa8.19□□□□□ -1.1
CDC42-201ENST00000315554 ACAD10Q6JQN1 1059 aa8.19□□□□□ -1.1
CDC42-201ENST00000315554 MSANTD2Q6P1R3 559 aa8.19□□□□□ -1.1
CDC42-201ENST00000315554 KLHDC10Q6PID8 442 aa8.19□□□□□ -1.1
CDC42-201ENST00000315554 TPRG1Q6ZUI0 275 aa8.19□□□□□ -1.1
CDC42-201ENST00000315554 SLC26A9Q7LBE3 791 aa8.19□□□□□ -1.1
CDC42-201ENST00000315554 DDX42Q86XP3 938 aaKnown RBP eCLIP8.19□□□□□ -1.1
CDC42-201ENST00000315554 PHF13Q86YI8 300 aaPredicted RBP8.19□□□□□ -1.1
CDC42-201ENST00000315554 DENND1CQ8IV53 801 aa8.19□□□□□ -1.1
CDC42-201ENST00000315554 MCOLN2Q8IZK6 566 aa8.19□□□□□ -1.1
CDC42-201ENST00000315554 OSCP1Q8WVF1 389 aa8.19□□□□□ -1.1
CDC42-201ENST00000315554 IRF7Q92985 503 aa8.19□□□□□ -1.1
CDC42-201ENST00000315554 BHMTQ93088 406 aa8.19□□□□□ -1.1
CDC42-201ENST00000315554 SLC2A13Q96QE2 648 aa8.19□□□□□ -1.1
CDC42-201ENST00000315554 CDK5RAP1Q96SZ6 601 aaKnown RBP8.19□□□□□ -1.1
CDC42-201ENST00000315554 CHP1Q99653 195 aa8.19□□□□□ -1.1
CDC42-201ENST00000315554 FAM83CQ9BQN1 747 aa8.19□□□□□ -1.1
CDC42-201ENST00000315554 RAB6CQ9H0N0 254 aa8.19□□□□□ -1.1
CDC42-201ENST00000315554 FAM204AQ9H8W3 233 aa8.19□□□□□ -1.1
CDC42-201ENST00000315554 ARHGEF3Q9NR81 526 aa8.19□□□□□ -1.1
CDC42-201ENST00000315554 OLA1Q9NTK5 396 aaKnown RBP8.19□□□□□ -1.1
CDC42-201ENST00000315554 LSM7Q9UK45 103 aaKnown RBP8.19□□□□□ -1.1
CDC42-201ENST00000315554 PIAS3Q9Y6X2 628 aa8.19□□□□□ -1.1
CDC42-201ENST00000315554 CUL9Q8IWT3 2517 aa8.19□□□□□ -1.1
CDC42-201ENST00000315554 HELZP42694 1942 aaKnown RBP8.19□□□□□ -1.1
CDC42-201ENST00000315554 GOLGA6L7A0A1B0GV03 622 aa8.19□□□□□ -1.1
CDC42-201ENST00000315554 E2F8A0AVK6 867 aa8.19□□□□□ -1.1
CDC42-201ENST00000315554 TMEM221A6NGB7 291 aa8.19□□□□□ -1.1
CDC42-201ENST00000315554 M0R296 226 aa8.19□□□□□ -1.1
CDC42-201ENST00000315554 TSPAN3O60637 253 aa8.19□□□□□ -1.1
CDC42-201ENST00000315554 FTLP02792 175 aaPredicted RBP8.19□□□□□ -1.1
CDC42-201ENST00000315554 CYP17A1P05093 508 aa8.19□□□□□ -1.1
CDC42-201ENST00000315554 CALB1P05937 261 aa8.19□□□□□ -1.1
CDC42-201ENST00000315554 ABCB4P21439 1286 aa8.19□□□□□ -1.1
CDC42-201ENST00000315554 ATXN1P54253 815 aaKnown RBP8.19□□□□□ -1.1
CDC42-201ENST00000315554 COG7P83436 770 aa8.19□□□□□ -1.1
CDC42-201ENST00000315554 CDK17Q00537 523 aa8.19□□□□□ -1.1
CDC42-201ENST00000315554 PFKPQ01813 784 aa8.19□□□□□ -1.1
CDC42-201ENST00000315554 GFPT1Q06210 699 aaPredicted RBP8.19□□□□□ -1.1
CDC42-201ENST00000315554 RUNX3Q13761 415 aa8.19□□□□□ -1.1
CDC42-201ENST00000315554 PDGFRLQ15198 375 aa8.19□□□□□ -1.1
CDC42-201ENST00000315554 TRIP4Q15650 581 aaPredicted RBP8.19□□□□□ -1.1
CDC42-201ENST00000315554 MLF2Q15773 248 aaPredicted RBP8.19□□□□□ -1.1
CDC42-201ENST00000315554 TSR1Q2NL82 804 aaKnown RBP8.19□□□□□ -1.1
CDC42-201ENST00000315554 ITPRIPL2Q3MIP1 535 aa8.19□□□□□ -1.1
CDC42-201ENST00000315554 ZC3H12AQ5D1E8 599 aaKnown RBP8.19□□□□□ -1.1
CDC42-201ENST00000315554 OTUD1Q5VV17 481 aaPredicted RBP8.19□□□□□ -1.1
CDC42-201ENST00000315554 DNAJC24Q6P3W2 148 aa8.19□□□□□ -1.1
CDC42-201ENST00000315554 TXNDC11Q6PKC3 985 aa8.19□□□□□ -1.1
CDC42-201ENST00000315554 TPGS1Q6ZTW0 290 aa8.19□□□□□ -1.1
CDC42-201ENST00000315554 ZNF276Q8N554 614 aa8.19□□□□□ -1.1
CDC42-201ENST00000315554 TC2NQ8N9U0 490 aa8.19□□□□□ -1.1
CDC42-201ENST00000315554 FLCNQ8NFG4 579 aa8.19□□□□□ -1.1
CDC42-201ENST00000315554 ZNF653Q96CK0 615 aa8.19□□□□□ -1.1
CDC42-201ENST00000315554 FCRL2Q96LA5 508 aaPredicted RBP8.19□□□□□ -1.1
CDC42-201ENST00000315554 CFAP57Q96MR6 1250 aa8.19□□□□□ -1.1
CDC42-201ENST00000315554 TBCBQ99426 244 aa8.19□□□□□ -1.1
CDC42-201ENST00000315554 SELENOOQ9BVL4 669 aa8.19□□□□□ -1.1
CDC42-201ENST00000315554 FOXQ1Q9C009 403 aa8.19□□□□□ -1.1
CDC42-201ENST00000315554 DEF6Q9H4E7 631 aa8.19□□□□□ -1.1
CDC42-201ENST00000315554 ECT2Q9H8V3 914 aa8.19□□□□□ -1.1
CDC42-201ENST00000315554 SPTLC3Q9NUV7 552 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms