RNA–Protein interactions for RNA: ENST00000315491.11

TUBB3-201, Transcript of tubulin beta 3 class III, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TUBB3, Length 1,769 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TUBB3-201ENST00000315491 CHD7Q9P2D1 2997 aa16.76■□□□□ 0.27
TUBB3-201ENST00000315491 SOX1O00570 391 aaPredicted RBP16.76■□□□□ 0.27
TUBB3-201ENST00000315491 ZNF185O15231 689 aa16.76■□□□□ 0.27
TUBB3-201ENST00000315491 PAPLNO95428 1278 aa16.76■□□□□ 0.27
TUBB3-201ENST00000315491 OAS1P00973 400 aaKnown RBP16.76■□□□□ 0.27
TUBB3-201ENST00000315491 RHOP08100 348 aa16.76■□□□□ 0.27
TUBB3-201ENST00000315491 CYP4F8P98187 520 aa16.76■□□□□ 0.27
TUBB3-201ENST00000315491 GPS2Q13227 327 aa16.76■□□□□ 0.27
TUBB3-201ENST00000315491 ZNF211Q13398 564 aaPredicted RBP16.76■□□□□ 0.27
TUBB3-201ENST00000315491 NNTQ13423 1086 aa16.76■□□□□ 0.27
TUBB3-201ENST00000315491 TUBB2AQ13885 445 aa16.76■□□□□ 0.27
TUBB3-201ENST00000315491 ERMARDQ5T6L9 678 aa16.76■□□□□ 0.27
TUBB3-201ENST00000315491 TMEM184AQ6ZMB5 413 aa16.76■□□□□ 0.27
TUBB3-201ENST00000315491 PDZD4Q76G19 769 aaPredicted RBP16.76■□□□□ 0.27
TUBB3-201ENST00000315491 MIB1Q86YT6 1006 aa16.76■□□□□ 0.27
TUBB3-201ENST00000315491 C12orf76Q8N812 135 aaPredicted RBP16.76■□□□□ 0.27
TUBB3-201ENST00000315491 CMASQ8NFW8 434 aaPredicted RBP16.76■□□□□ 0.27
TUBB3-201ENST00000315491 EXD1Q8NHP7 514 aa16.76■□□□□ 0.27
TUBB3-201ENST00000315491 RNF34Q969K3 372 aa16.76■□□□□ 0.27
TUBB3-201ENST00000315491 NTAN1Q96AB6 310 aa16.76■□□□□ 0.27
TUBB3-201ENST00000315491 TUBB2BQ9BVA1 445 aa16.76■□□□□ 0.27
TUBB3-201ENST00000315491 WDCPQ9H6R7 721 aa16.76■□□□□ 0.27
TUBB3-201ENST00000315491 DNMT3LQ9UJW3 386 aa16.76■□□□□ 0.27
TUBB3-201ENST00000315491 CDC23Q9UJX2 597 aa16.76■□□□□ 0.27
TUBB3-201ENST00000315491 A0A1W2PRU2 124 aa16.75■□□□□ 0.27
TUBB3-201ENST00000315491 SLC12A8A0AV02 714 aa16.75■□□□□ 0.27
TUBB3-201ENST00000315491 C2orf78A6NCI8 922 aa16.75■□□□□ 0.27
TUBB3-201ENST00000315491 COCHO43405 550 aa16.75■□□□□ 0.27
TUBB3-201ENST00000315491 GLP2RO95838 553 aa16.75■□□□□ 0.27
TUBB3-201ENST00000315491 SRGAP2BP0DMP2 458 aa16.75■□□□□ 0.27
TUBB3-201ENST00000315491 PYGMP11217 842 aa16.75■□□□□ 0.27
TUBB3-201ENST00000315491 TBX4P57082 545 aa16.75■□□□□ 0.27
TUBB3-201ENST00000315491 TRIP4Q15650 581 aaPredicted RBP16.75■□□□□ 0.27
TUBB3-201ENST00000315491 ARL13BQ3SXY8 428 aa16.75■□□□□ 0.27
TUBB3-201ENST00000315491 ODF2Q5BJF6 829 aa16.75■□□□□ 0.27
TUBB3-201ENST00000315491 BRMS1LQ5PSV4 323 aa16.75■□□□□ 0.27
TUBB3-201ENST00000315491 SEL1L2Q5TEA6 688 aa16.75■□□□□ 0.27
TUBB3-201ENST00000315491 GRASPQ7Z6J2 395 aaPredicted RBP16.75■□□□□ 0.27
TUBB3-201ENST00000315491 RCOR2Q8IZ40 523 aa16.75■□□□□ 0.27
TUBB3-201ENST00000315491 SMG7Q92540 1137 aaKnown RBP16.75■□□□□ 0.27
TUBB3-201ENST00000315491 RBM41Q96IZ5 413 aaKnown RBP16.75■□□□□ 0.27
TUBB3-201ENST00000315491 PIDD1Q9HB75 910 aa16.75■□□□□ 0.27
TUBB3-201ENST00000315491 TRPC7Q9HCX4 862 aa16.75■□□□□ 0.27
TUBB3-201ENST00000315491 STAU2Q9NUL3 570 aaKnown RBP eCLIP16.75■□□□□ 0.27
TUBB3-201ENST00000315491 GPATCH2LQ9NWQ4 482 aa16.75■□□□□ 0.27
TUBB3-201ENST00000315491 PSD3Q9NYI0 1048 aa16.75■□□□□ 0.27
TUBB3-201ENST00000315491 FZD10Q9ULW2 581 aa16.75■□□□□ 0.27
TUBB3-201ENST00000315491 TLR6Q9Y2C9 796 aa16.75■□□□□ 0.27
TUBB3-201ENST00000315491 MRFAP1Q9Y605 127 aa16.75■□□□□ 0.27
TUBB3-201ENST00000315491 MTCH2Q9Y6C9 303 aa16.75■□□□□ 0.27
TUBB3-201ENST00000315491 LAMA3Q16787 3333 aa16.74■□□□□ 0.27
TUBB3-201ENST00000315491 LINC01565O15544 149 aa16.74■□□□□ 0.27
TUBB3-201ENST00000315491 CEP104O60308 925 aa16.74■□□□□ 0.27
TUBB3-201ENST00000315491 GJA1P17302 382 aa16.74■□□□□ 0.27
TUBB3-201ENST00000315491 CCR1P32246 355 aa16.74■□□□□ 0.27
TUBB3-201ENST00000315491 ADRA1BP35368 520 aa16.74■□□□□ 0.27
TUBB3-201ENST00000315491 CCR2P41597 374 aa16.74■□□□□ 0.27
TUBB3-201ENST00000315491 AIF1P55008 147 aa16.74■□□□□ 0.27
TUBB3-201ENST00000315491 PPP2R5DQ14738 602 aa16.74■□□□□ 0.27
TUBB3-201ENST00000315491 ZC3H12AQ5D1E8 599 aaKnown RBP16.74■□□□□ 0.27
TUBB3-201ENST00000315491 TXNDC8Q6A555 127 aa16.74■□□□□ 0.27
TUBB3-201ENST00000315491 AADACL2Q6P093 401 aa16.74■□□□□ 0.27
TUBB3-201ENST00000315491 TMC5Q6UXY8 1006 aa16.74■□□□□ 0.27
TUBB3-201ENST00000315491 PSTKQ8IV42 348 aaKnown RBP16.74■□□□□ 0.27
TUBB3-201ENST00000315491 RAPGEF5Q92565 580 aa16.74■□□□□ 0.27
TUBB3-201ENST00000315491 RNF25Q96BH1 459 aaPredicted RBP16.74■□□□□ 0.27
TUBB3-201ENST00000315491 SLC39A13Q96H72 371 aa16.74■□□□□ 0.27
TUBB3-201ENST00000315491 CAPZA3Q96KX2 299 aa16.74■□□□□ 0.27
TUBB3-201ENST00000315491 TKTL2Q9H0I9 626 aa16.74■□□□□ 0.27
TUBB3-201ENST00000315491 ARHGEF38Q9NXL2 777 aa16.74■□□□□ 0.27
TUBB3-201ENST00000315491 AP4E1Q9UPM8 1137 aa16.74■□□□□ 0.27
TUBB3-201ENST00000315491 LRRD1A4D1F6 860 aa16.74■□□□□ 0.27
TUBB3-201ENST00000315491 PI4K2BG5E9Z4 385 aa16.74■□□□□ 0.27
TUBB3-201ENST00000315491 NRG2O14511 850 aaPredicted RBP16.74■□□□□ 0.27
TUBB3-201ENST00000315491 KDELR1P24390 212 aa16.74■□□□□ 0.27
TUBB3-201ENST00000315491 KPNA1P52294 538 aaPredicted RBP16.74■□□□□ 0.27
TUBB3-201ENST00000315491 NTHL1P78549 312 aa16.74■□□□□ 0.27
TUBB3-201ENST00000315491 SCAPQ12770 1279 aa16.74■□□□□ 0.27
TUBB3-201ENST00000315491 ADGRE1Q14246 886 aa16.74■□□□□ 0.27
TUBB3-201ENST00000315491 CA9Q16790 459 aa16.74■□□□□ 0.27
TUBB3-201ENST00000315491 EFHC2Q5JST6 749 aa16.74■□□□□ 0.27
TUBB3-201ENST00000315491 CREG2Q8IUH2 290 aa16.74■□□□□ 0.27
TUBB3-201ENST00000315491 CCDC50Q8IVM0 306 aa16.74■□□□□ 0.27
TUBB3-201ENST00000315491 RASGEF1CQ8N431 466 aa16.74■□□□□ 0.27
TUBB3-201ENST00000315491 KCTD6Q8NC69 237 aa16.74■□□□□ 0.27
TUBB3-201ENST00000315491 SHKBP1Q8TBC3 707 aa16.74■□□□□ 0.27
TUBB3-201ENST00000315491 FCRL2Q96LA5 508 aaPredicted RBP16.74■□□□□ 0.27
TUBB3-201ENST00000315491 RNF38Q9H0F5 515 aa16.74■□□□□ 0.27
TUBB3-201ENST00000315491 DHX35Q9H5Z1 703 aaKnown RBP16.74■□□□□ 0.27
TUBB3-201ENST00000315491 ANLNQ9NQW6 1124 aa16.74■□□□□ 0.27
TUBB3-201ENST00000315491 TMPRSS4Q9NRS4 437 aa16.74■□□□□ 0.27
TUBB3-201ENST00000315491 SLTMQ9NWH9 1034 aaKnown RBP eCLIP16.74■□□□□ 0.274e-7■■■□□ 18.7
TUBB3-201ENST00000315491 CWC15Q9P013 229 aaKnown RBP16.74■□□□□ 0.27
TUBB3-201ENST00000315491 HBS1LQ9Y450 684 aaKnown RBP16.74■□□□□ 0.27
TUBB3-201ENST00000315491 MOSPD3O75425 235 aa16.73■□□□□ 0.27
TUBB3-201ENST00000315491 OLFM2O95897 454 aa16.73■□□□□ 0.27
TUBB3-201ENST00000315491 SLC2A3P11169 496 aa16.73■□□□□ 0.27
TUBB3-201ENST00000315491 PFKLP17858 780 aa16.73■□□□□ 0.27
TUBB3-201ENST00000315491 POU3F3P20264 500 aaPredicted RBP16.73■□□□□ 0.27
TUBB3-201ENST00000315491 ARSEP51690 589 aa16.73■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 15.9 ms