RNA–Protein interactions for RNA: ENST00000312970.12

TPM3-203, Transcript of tropomyosin 3, humanhuman

TSL 5

Gene TPM3, Length 750 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-203ENST00000312970 RMND1Q9NWS8 449 aa8.56□□□□□ -1.04
TPM3-203ENST00000312970 CLIC5Q9NZA1 410 aa8.56□□□□□ -1.04
TPM3-203ENST00000312970 MARK1Q9P0L2 795 aa8.56□□□□□ -1.04
TPM3-203ENST00000312970 EVLQ9UI08 416 aaPredicted RBP8.56□□□□□ -1.04
TPM3-203ENST00000312970 MBD1Q9UIS9 605 aaPredicted RBP8.56□□□□□ -1.04
TPM3-203ENST00000312970 FBXO10Q9UK96 956 aa8.56□□□□□ -1.04
TPM3-203ENST00000312970 HCN2Q9UL51 889 aa8.56□□□□□ -1.04
TPM3-203ENST00000312970 A0A1W2PQF6 199 aa8.55□□□□□ -1.04
TPM3-203ENST00000312970 ANKRD33BA6NCL7 494 aa8.55□□□□□ -1.04
TPM3-203ENST00000312970 PRRT4C9JH25 899 aa8.55□□□□□ -1.04
TPM3-203ENST00000312970 GFRA2O00451 464 aa8.55□□□□□ -1.04
TPM3-203ENST00000312970 CDX4O14627 284 aaPredicted RBP8.55□□□□□ -1.04
TPM3-203ENST00000312970 MDM4O15151 490 aa8.55□□□□□ -1.04
TPM3-203ENST00000312970 AP5Z1O43299 807 aa8.55□□□□□ -1.04
TPM3-203ENST00000312970 ZNF217O75362 1048 aa8.55□□□□□ -1.04
TPM3-203ENST00000312970 STC2O76061 302 aa8.55□□□□□ -1.04
TPM3-203ENST00000312970 KLKB1P03952 638 aa8.55□□□□□ -1.04
TPM3-203ENST00000312970 GABRG2P18507 467 aa8.55□□□□□ -1.04
TPM3-203ENST00000312970 WASP42768 502 aa8.55□□□□□ -1.04
TPM3-203ENST00000312970 PRCPP42785 496 aa8.55□□□□□ -1.04
TPM3-203ENST00000312970 PTGER3P43115 390 aa8.55□□□□□ -1.04
TPM3-203ENST00000312970 DGKGP49619 791 aa8.55□□□□□ -1.04
TPM3-203ENST00000312970 MXI1P50539 228 aa8.55□□□□□ -1.04
TPM3-203ENST00000312970 RAD23BP54727 409 aa8.55□□□□□ -1.04
TPM3-203ENST00000312970 SLC8A3P57103 927 aa8.55□□□□□ -1.04
TPM3-203ENST00000312970 PNOCQ13519 176 aa8.55□□□□□ -1.04
TPM3-203ENST00000312970 TRIM61Q5EBN2 209 aa8.55□□□□□ -1.04
TPM3-203ENST00000312970 LYSMD4Q5XG99 296 aa8.55□□□□□ -1.04
TPM3-203ENST00000312970 EGFLAMQ63HQ2 1017 aa8.55□□□□□ -1.04
TPM3-203ENST00000312970 PSAPL1Q6NUJ1 521 aa8.55□□□□□ -1.04
TPM3-203ENST00000312970 Q6ZNB5 142 aa8.55□□□□□ -1.04
TPM3-203ENST00000312970 SMYD4Q8IYR2 804 aaPredicted RBP8.55□□□□□ -1.04
TPM3-203ENST00000312970 ARHGAP18Q8N392 663 aa8.55□□□□□ -1.04
TPM3-203ENST00000312970 ANKRD52Q8NB46 1076 aa8.55□□□□□ -1.04
TPM3-203ENST00000312970 SLC4A11Q8NBS3 891 aa8.55□□□□□ -1.04
TPM3-203ENST00000312970 CEP76Q8TAP6 659 aa8.55□□□□□ -1.04
TPM3-203ENST00000312970 TATDN2Q93075 761 aa8.55□□□□□ -1.04
TPM3-203ENST00000312970 GSDMAQ96QA5 445 aa8.55□□□□□ -1.04
TPM3-203ENST00000312970 ACOX2Q99424 681 aa8.55□□□□□ -1.04
TPM3-203ENST00000312970 TMEM74BQ9NUR3 256 aa8.55□□□□□ -1.04
TPM3-203ENST00000312970 PLK2Q9NYY3 685 aa8.55□□□□□ -1.04
TPM3-203ENST00000312970 PILRBQ9UKJ0 227 aa8.55□□□□□ -1.04
TPM3-203ENST00000312970 TNRC6BQ9UPQ9 1833 aaKnown RBP8.54□□□□□ -1.04
TPM3-203ENST00000312970 GOLGA6L4A6NEF3 574 aa8.54□□□□□ -1.04
TPM3-203ENST00000312970 HMBSP08397 361 aa8.54□□□□□ -1.04
TPM3-203ENST00000312970 CEACAM1P13688 526 aa8.54□□□□□ -1.04
TPM3-203ENST00000312970 CSRP1P21291 193 aaKnown RBP8.54□□□□□ -1.04
TPM3-203ENST00000312970 ITPKAP23677 461 aa8.54□□□□□ -1.04
TPM3-203ENST00000312970 HOXD12P35452 270 aa8.54□□□□□ -1.04
TPM3-203ENST00000312970 NOVA1P51513 510 aaKnown RBP8.54□□□□□ -1.04
TPM3-203ENST00000312970 TKTL1P51854 596 aa8.54□□□□□ -1.04
TPM3-203ENST00000312970 YWHAGP61981 247 aaKnown RBP eCLIP8.54□□□□□ -1.04
TPM3-203ENST00000312970 FKBP3Q00688 224 aaKnown RBP8.54□□□□□ -1.04
TPM3-203ENST00000312970 RPL6Q02878 288 aaKnown RBP8.54□□□□□ -1.04
TPM3-203ENST00000312970 ZNF33AQ06730 810 aa8.54□□□□□ -1.04
TPM3-203ENST00000312970 EFEMP1Q12805 493 aa8.54□□□□□ -1.04
TPM3-203ENST00000312970 E2F5Q15329 346 aa8.54□□□□□ -1.04
TPM3-203ENST00000312970 DUOXA1Q1HG43 343 aa8.54□□□□□ -1.04
TPM3-203ENST00000312970 UAP1L1Q3KQV9 507 aa8.54□□□□□ -1.04
TPM3-203ENST00000312970 COBLL1Q53SF7 1204 aa8.54□□□□□ -1.04
TPM3-203ENST00000312970 RAB41Q5JT25 222 aa8.54□□□□□ -1.04
TPM3-203ENST00000312970 SH3PXD2AQ5TCZ1 1133 aa8.54□□□□□ -1.04
TPM3-203ENST00000312970 ZNF658Q5TYW1 1059 aaPredicted RBP8.54□□□□□ -1.04
TPM3-203ENST00000312970 TCERG1LQ5VWI1 586 aa8.54□□□□□ -1.04
TPM3-203ENST00000312970 ARHGAP17Q68EM7 881 aa8.54□□□□□ -1.04
TPM3-203ENST00000312970 ANKRD40Q6AI12 368 aa8.54□□□□□ -1.04
TPM3-203ENST00000312970 PM20D1Q6GTS8 502 aa8.54□□□□□ -1.04
TPM3-203ENST00000312970 SLC23A3Q6PIS1 610 aa8.54□□□□□ -1.04
TPM3-203ENST00000312970 LRSAM1Q6UWE0 723 aa8.54□□□□□ -1.04
TPM3-203ENST00000312970 TOGARAM2Q6ZUX3 1019 aa8.54□□□□□ -1.04
TPM3-203ENST00000312970 RSRC2Q7L4I2 434 aaKnown RBP8.54□□□□□ -1.04
TPM3-203ENST00000312970 ARMCX6Q7L4S7 300 aa8.54□□□□□ -1.04
TPM3-203ENST00000312970 PIGZQ86VD9 579 aa8.54□□□□□ -1.04
TPM3-203ENST00000312970 FMR1NBQ8N0W7 255 aaPredicted RBP8.54□□□□□ -1.04
TPM3-203ENST00000312970 KDF1Q8NAX2 398 aaPredicted RBP8.54□□□□□ -1.04
TPM3-203ENST00000312970 IPO4Q8TEX9 1081 aaKnown RBP8.54□□□□□ -1.04
TPM3-203ENST00000312970 PTCD2Q8WV60 388 aaKnown RBP8.54□□□□□ -1.04
TPM3-203ENST00000312970 BHMTQ93088 406 aa8.54□□□□□ -1.04
TPM3-203ENST00000312970 TSG101Q99816 390 aa8.54□□□□□ -1.04
TPM3-203ENST00000312970 GABRG3Q99928 467 aa8.54□□□□□ -1.04
TPM3-203ENST00000312970 GTPBP4Q9BZE4 634 aaKnown RBP8.54□□□□□ -1.04
TPM3-203ENST00000312970 CALCOCO1Q9P1Z2 691 aa8.54□□□□□ -1.04
TPM3-203ENST00000312970 RASAL2Q9UJF2 1139 aa8.54□□□□□ -1.04
TPM3-203ENST00000312970 KIAA1257Q9ULG3 409 aa8.54□□□□□ -1.04
TPM3-203ENST00000312970 STRIP2Q9ULQ0 834 aa8.54□□□□□ -1.04
TPM3-203ENST00000312970 SLC6A14Q9UN76 642 aa8.54□□□□□ -1.04
TPM3-203ENST00000312970 SLC27A6Q9Y2P4 619 aa8.54□□□□□ -1.04
TPM3-203ENST00000312970 COQ4Q9Y3A0 265 aa8.54□□□□□ -1.04
TPM3-203ENST00000312970 MAST4O15021 2626 aa8.54□□□□□ -1.04
TPM3-203ENST00000312970 PLXND1Q9Y4D7 1925 aa8.54□□□□□ -1.04
TPM3-203ENST00000312970 CEP192Q8TEP8 1941 aa8.53□□□□□ -1.04
TPM3-203ENST00000312970 IGHV1OR15-9A0A0B4J2B8 117 aa8.53□□□□□ -1.04
TPM3-203ENST00000312970 WASH3PC4AMC7 463 aa8.53□□□□□ -1.04
TPM3-203ENST00000312970 GIPC1O14908 333 aa8.53□□□□□ -1.04
TPM3-203ENST00000312970 NPC1O15118 1278 aa8.53□□□□□ -1.04
TPM3-203ENST00000312970 SLC16A3O15427 465 aaKnown RBP8.53□□□□□ -1.04
TPM3-203ENST00000312970 NDUFS2O75306 463 aa8.53□□□□□ -1.04
TPM3-203ENST00000312970 SMC2O95347 1197 aa8.53□□□□□ -1.04
TPM3-203ENST00000312970 ZBED1O96006 694 aa8.53□□□□□ -1.04
TPM3-203ENST00000312970 PENKP01210 267 aaPredicted RBP8.53□□□□□ -1.04
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms