RNA–Protein interactions for RNA: ENST00000310645.9

COL6A2-202, Transcript of collagen type VI alpha 2 chain, humanhuman

TSL 5 BASIC

Gene COL6A2, Length 3,446 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL6A2-202ENST00000310645 ZNF358Q9NW07 568 aa15.15■□□□□ 0.02
COL6A2-202ENST00000310645 ZNF180Q9UJW8 692 aa15.15■□□□□ 0.02
COL6A2-202ENST00000310645 ITGA11Q9UKX5 1188 aa15.15■□□□□ 0.02
COL6A2-202ENST00000310645 PEX1O43933 1283 aa15.15■□□□□ 0.02
COL6A2-202ENST00000310645 ASS1P00966 412 aaKnown RBP15.15■□□□□ 0.02
COL6A2-202ENST00000310645 EDN1P05305 212 aa15.15■□□□□ 0.02
COL6A2-202ENST00000310645 FGF3P11487 239 aaPredicted RBP15.15■□□□□ 0.02
COL6A2-202ENST00000310645 CDK4P11802 303 aa15.15■□□□□ 0.02
COL6A2-202ENST00000310645 NUDT2P50583 147 aa15.15■□□□□ 0.02
COL6A2-202ENST00000310645 PKNOX1P55347 436 aa15.15■□□□□ 0.02
COL6A2-202ENST00000310645 PDK1Q15118 436 aa15.15■□□□□ 0.02
COL6A2-202ENST00000310645 FAM102AQ5T9C2 384 aaPredicted RBP15.15■□□□□ 0.02
COL6A2-202ENST00000310645 MBLAC2Q68D91 279 aa15.15■□□□□ 0.02
COL6A2-202ENST00000310645 KLC3Q6P597 504 aa15.15■□□□□ 0.02
COL6A2-202ENST00000310645 USP13Q92995 863 aaPredicted RBP15.15■□□□□ 0.02
COL6A2-202ENST00000310645 PEBP4Q96S96 227 aa15.15■□□□□ 0.02
COL6A2-202ENST00000310645 NRDE2Q9H7Z3 1164 aa15.15■□□□□ 0.02
COL6A2-202ENST00000310645 ARHGAP26Q9UNA1 814 aa15.15■□□□□ 0.02
COL6A2-202ENST00000310645 SORCS3Q9UPU3 1222 aa15.15■□□□□ 0.02
COL6A2-202ENST00000310645 LOXHD1Q8IVV2 1947 aa15.15■□□□□ 0.02
COL6A2-202ENST00000310645 KDM4FA0A1W2PPD8 638 aa15.14■□□□□ 0.01
COL6A2-202ENST00000310645 NOP56O00567 594 aaKnown RBP15.14■□□□□ 0.01
COL6A2-202ENST00000310645 NEMP1O14524 444 aa15.14■□□□□ 0.01
COL6A2-202ENST00000310645 BIRC5O15392 142 aa15.14■□□□□ 0.01
COL6A2-202ENST00000310645 TRUB2O95900 331 aaKnown RBP15.14■□□□□ 0.01
COL6A2-202ENST00000310645 F7P08709 466 aaPredicted RBP15.14■□□□□ 0.01
COL6A2-202ENST00000310645 COX4I1P13073 169 aa15.14■□□□□ 0.01
COL6A2-202ENST00000310645 EIF4BP23588 611 aaKnown RBP15.14■□□□□ 0.01
COL6A2-202ENST00000310645 HDAC4P56524 1084 aa15.14■□□□□ 0.01
COL6A2-202ENST00000310645 XIAPP98170 497 aa15.14■□□□□ 0.01
COL6A2-202ENST00000310645 EMC2Q15006 297 aa15.14■□□□□ 0.01
COL6A2-202ENST00000310645 HSP90AA5PQ58FG0 334 aa15.14■□□□□ 0.01
COL6A2-202ENST00000310645 SLC27A3Q5K4L6 730 aa15.14■□□□□ 0.01
COL6A2-202ENST00000310645 AMIGO2Q86SJ2 522 aa15.14■□□□□ 0.01
COL6A2-202ENST00000310645 BTBD9Q96Q07 612 aa15.14■□□□□ 0.01
COL6A2-202ENST00000310645 MYO18AQ92614 2054 aaKnown RBP15.14■□□□□ 0.01
COL6A2-202ENST00000310645 A0A1B0GTW7 788 aa15.14■□□□□ 0.01
COL6A2-202ENST00000310645 TPP1O14773 563 aa15.14■□□□□ 0.01
COL6A2-202ENST00000310645 ERBB2P04626 1255 aa15.14■□□□□ 0.01
COL6A2-202ENST00000310645 IMPDH2P12268 514 aa15.14■□□□□ 0.01
COL6A2-202ENST00000310645 TCN1P20061 433 aaPredicted RBP15.14■□□□□ 0.01
COL6A2-202ENST00000310645 PRKCHP24723 683 aa15.14■□□□□ 0.01
COL6A2-202ENST00000310645 BCAR1P56945 870 aa15.14■□□□□ 0.01
COL6A2-202ENST00000310645 ARCQ7LC44 396 aa15.14■□□□□ 0.01
COL6A2-202ENST00000310645 KBTBD6Q86V97 674 aa15.14■□□□□ 0.01
COL6A2-202ENST00000310645 NCAPG2Q86XI2 1143 aa15.14■□□□□ 0.01
COL6A2-202ENST00000310645 CATSPER2Q96P56 530 aa15.14■□□□□ 0.01
COL6A2-202ENST00000310645 OXCT2Q9BYC2 517 aaPredicted RBP15.14■□□□□ 0.01
COL6A2-202ENST00000310645 NIF3L1Q9GZT8 377 aa15.14■□□□□ 0.01
COL6A2-202ENST00000310645 PNPLA8Q9NP80 782 aa15.14■□□□□ 0.01
COL6A2-202ENST00000310645 HERC5Q9UII4 1024 aaKnown RBP15.14■□□□□ 0.01
COL6A2-202ENST00000310645 TRDMT1O14717 391 aaKnown RBP15.14■□□□□ 0.01
COL6A2-202ENST00000310645 HMGCRP04035 888 aa15.14■□□□□ 0.01
COL6A2-202ENST00000310645 ARRB2P32121 409 aa15.14■□□□□ 0.01
COL6A2-202ENST00000310645 TSHZ1Q6ZSZ6 1077 aa15.14■□□□□ 0.01
COL6A2-202ENST00000310645 CMASQ8NFW8 434 aaPredicted RBP15.14■□□□□ 0.01
COL6A2-202ENST00000310645 GSDMBQ8TAX9 411 aa15.14■□□□□ 0.01
COL6A2-202ENST00000310645 RAB3IL1Q8TBN0 382 aa15.14■□□□□ 0.01
COL6A2-202ENST00000310645 MOCOSQ96EN8 888 aa15.14■□□□□ 0.01
COL6A2-202ENST00000310645 ZNF668Q96K58 619 aaPredicted RBP15.14■□□□□ 0.01
COL6A2-202ENST00000310645 PLEKHG4BQ96PX9 1271 aa15.14■□□□□ 0.01
COL6A2-202ENST00000310645 KCNK16Q96T55 309 aa15.14■□□□□ 0.01
COL6A2-202ENST00000310645 ZNF518BQ9C0D4 1074 aa15.14■□□□□ 0.01
COL6A2-202ENST00000310645 TDRKHQ9Y2W6 561 aaKnown RBP15.14■□□□□ 0.01
COL6A2-202ENST00000310645 TBC1D12O60347 775 aa15.13■□□□□ 0.01
COL6A2-202ENST00000310645 YWHAEP62258 255 aaKnown RBP15.13■□□□□ 0.01
COL6A2-202ENST00000310645 DBN1Q16643 649 aa15.13■□□□□ 0.01
COL6A2-202ENST00000310645 ZNF699Q32M78 642 aa15.13■□□□□ 0.01
COL6A2-202ENST00000310645 TNS4Q8IZW8 715 aa15.13■□□□□ 0.01
COL6A2-202ENST00000310645 MIPOL1Q8TD10 442 aa15.13■□□□□ 0.01
COL6A2-202ENST00000310645 ADPGKQ9BRR6 497 aa15.13■□□□□ 0.01
COL6A2-202ENST00000310645 GNEQ9Y223 722 aaKnown RBP15.13■□□□□ 0.01
COL6A2-202ENST00000310645 ZNF711Q9Y462 761 aa15.13■□□□□ 0.01
COL6A2-202ENST00000310645 ZBTB14O43829 449 aa15.13■□□□□ 0.01
COL6A2-202ENST00000310645 MYBPC1Q00872 1141 aa15.13■□□□□ 0.01
COL6A2-202ENST00000310645 FLOT2Q14254 428 aa15.13■□□□□ 0.01
COL6A2-202ENST00000310645 RARS2Q5T160 578 aaKnown RBP15.13■□□□□ 0.01
COL6A2-202ENST00000310645 OGFRL1Q5TC84 451 aaPredicted RBP15.13■□□□□ 0.01
COL6A2-202ENST00000310645 SLFN12LQ6IEE8 588 aa15.13■□□□□ 0.01
COL6A2-202ENST00000310645 TRIM67Q6ZTA4 783 aa15.13■□□□□ 0.01
COL6A2-202ENST00000310645 CDR2LQ86X02 465 aaPredicted RBP15.13■□□□□ 0.01
COL6A2-202ENST00000310645 UBA3Q8TBC4 463 aa15.13■□□□□ 0.01
COL6A2-202ENST00000310645 ADAM32Q8TC27 787 aa15.13■□□□□ 0.01
COL6A2-202ENST00000310645 HSPBAP1Q96EW2 488 aa15.13■□□□□ 0.01
COL6A2-202ENST00000310645 LENG8Q96PV6 779 aaPredicted RBP15.13■□□□□ 0.01
COL6A2-202ENST00000310645 CDRT15Q96T59 188 aa15.13■□□□□ 0.01
COL6A2-202ENST00000310645 TMEM39BQ9GZU3 492 aa15.13■□□□□ 0.01
COL6A2-202ENST00000310645 EMCNQ9ULC0 261 aa15.13■□□□□ 0.01
COL6A2-202ENST00000310645 PSMD13Q9UNM6 376 aa15.13■□□□□ 0.01
COL6A2-202ENST00000310645 XPO1O14980 1071 aaKnown RBP15.13■□□□□ 0.01
COL6A2-202ENST00000310645 STRNO43815 780 aa15.13■□□□□ 0.01
COL6A2-202ENST00000310645 DKC1O60832 514 aaKnown RBP eCLIP15.13■□□□□ 0.01
COL6A2-202ENST00000310645 LDHAP00338 332 aaKnown RBP15.13■□□□□ 0.01
COL6A2-202ENST00000310645 PTGER2P43116 358 aa15.13■□□□□ 0.01
COL6A2-202ENST00000310645 GABRB2P47870 512 aa15.13■□□□□ 0.01
COL6A2-202ENST00000310645 PPIDQ08752 370 aaKnown RBP15.13■□□□□ 0.01
COL6A2-202ENST00000310645 BAATQ14032 418 aaPredicted RBP15.13■□□□□ 0.01
COL6A2-202ENST00000310645 TFDP2Q14188 446 aa15.13■□□□□ 0.01
COL6A2-202ENST00000310645 MARVELD2Q8N4S9 558 aa15.13■□□□□ 0.01
COL6A2-202ENST00000310645 ATP2A3Q93084 1043 aa15.13■□□□□ 0.01
Retrieved 100 of 20,778 RNA–protein pairs in 57.3 ms