RNA–Protein interactions for RNA: ENST00000308537.4

PDZRN3-202, Transcript of PDZ domain containing ring finger 3, humanhuman

TSL 1 (best) BASIC

Gene PDZRN3, Length 1,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDZRN3-202ENST00000308537 EOGTQ5NDL2 527 aa20.71■□□□□ 0.91
PDZRN3-202ENST00000308537 RNF43Q68DV7 783 aa20.71■□□□□ 0.91
PDZRN3-202ENST00000308537 ENOSF1Q7L5Y1 443 aa20.71■□□□□ 0.91
PDZRN3-202ENST00000308537 PIWIL1Q96J94 861 aaKnown RBP20.71■□□□□ 0.91
PDZRN3-202ENST00000308537 USP18Q9UMW8 372 aa20.71■□□□□ 0.91
PDZRN3-202ENST00000308537 LTFP02788 710 aa20.7■□□□□ 0.9
PDZRN3-202ENST00000308537 KRT5P13647 590 aa20.7■□□□□ 0.9
PDZRN3-202ENST00000308537 KCNMA1Q12791 1236 aa20.7■□□□□ 0.9
PDZRN3-202ENST00000308537 MAN2A1Q16706 1144 aa20.7■□□□□ 0.9
PDZRN3-202ENST00000308537 GEN1Q17RS7 908 aa20.7■□□□□ 0.9
PDZRN3-202ENST00000308537 GBP6Q6ZN66 633 aa20.7■□□□□ 0.9
PDZRN3-202ENST00000308537 PRR23CQ6ZRP0 262 aa20.7■□□□□ 0.9
PDZRN3-202ENST00000308537 WDTC1Q8N5D0 677 aa20.7■□□□□ 0.9
PDZRN3-202ENST00000308537 FRMD1Q8N878 549 aa20.7■□□□□ 0.9
PDZRN3-202ENST00000308537 STK32AQ8WU08 396 aa20.7■□□□□ 0.9
PDZRN3-202ENST00000308537 GABRG3Q99928 467 aa20.7■□□□□ 0.9
PDZRN3-202ENST00000308537 ARRDC1-AS1Q9H2J1 176 aa20.7■□□□□ 0.9
PDZRN3-202ENST00000308537 TJP2Q9UDY2 1190 aa20.7■□□□□ 0.9
PDZRN3-202ENST00000308537 INVSQ9Y283 1065 aa20.7■□□□□ 0.9
PDZRN3-202ENST00000308537 PAPSS1O43252 624 aaPredicted RBP20.69■□□□□ 0.9
PDZRN3-202ENST00000308537 LETM1O95202 739 aaPredicted RBP20.69■□□□□ 0.9
PDZRN3-202ENST00000308537 HOXD9P28356 352 aaPredicted RBP20.69■□□□□ 0.9
PDZRN3-202ENST00000308537 GNA15P30679 374 aa20.69■□□□□ 0.9
PDZRN3-202ENST00000308537 LMNB2Q03252 620 aa20.69■□□□□ 0.9
PDZRN3-202ENST00000308537 ENPP2Q13822 863 aa20.69■□□□□ 0.9
PDZRN3-202ENST00000308537 MAP7D1Q3KQU3 841 aa20.69■□□□□ 0.9
PDZRN3-202ENST00000308537 PREPLQ4J6C6 727 aaPredicted RBP20.69■□□□□ 0.9
PDZRN3-202ENST00000308537 PMS2CLQ68D20 193 aa20.69■□□□□ 0.9
PDZRN3-202ENST00000308537 TMEM215Q68D42 235 aa20.69■□□□□ 0.9
PDZRN3-202ENST00000308537 TMEM110Q86TL2 294 aa20.69■□□□□ 0.9
PDZRN3-202ENST00000308537 SCUBE3Q8IX30 993 aa20.69■□□□□ 0.9
PDZRN3-202ENST00000308537 RXFP3Q9NSD7 469 aa20.69■□□□□ 0.9
PDZRN3-202ENST00000308537 SAMSN1Q9NSI8 373 aaKnown RBP20.69■□□□□ 0.9
PDZRN3-202ENST00000308537 PI4KAP42356 2102 aa20.69■□□□□ 0.9
PDZRN3-202ENST00000308537 CEP192Q8TEP8 1941 aa20.68■□□□□ 0.9
PDZRN3-202ENST00000308537 FBXO21O94952 628 aa20.68■□□□□ 0.9
PDZRN3-202ENST00000308537 GABRG2P18507 467 aa20.68■□□□□ 0.9
PDZRN3-202ENST00000308537 NTSR1P30989 418 aa20.68■□□□□ 0.9
PDZRN3-202ENST00000308537 P2RY2P41231 377 aa20.68■□□□□ 0.9
PDZRN3-202ENST00000308537 WASP42768 502 aa20.68■□□□□ 0.9
PDZRN3-202ENST00000308537 MTIF2P46199 727 aaKnown RBP20.68■□□□□ 0.9
PDZRN3-202ENST00000308537 SGSHP51688 502 aa20.68■□□□□ 0.9
PDZRN3-202ENST00000308537 ARHGAP44Q17R89 818 aa20.68■□□□□ 0.9
PDZRN3-202ENST00000308537 HSP90AA4PQ58FG1 418 aa20.68■□□□□ 0.9
PDZRN3-202ENST00000308537 SMYD5Q6GMV2 418 aa20.68■□□□□ 0.9
PDZRN3-202ENST00000308537 KIAA1211LQ6NV74 962 aa20.68■□□□□ 0.9
PDZRN3-202ENST00000308537 CREBRFQ8IUR6 639 aa20.68■□□□□ 0.9
PDZRN3-202ENST00000308537 RNF139Q8WU17 664 aa20.68■□□□□ 0.9
PDZRN3-202ENST00000308537 MIS12Q9H081 205 aa20.68■□□□□ 0.9
PDZRN3-202ENST00000308537 NDST4Q9H3R1 872 aa20.68■□□□□ 0.9
PDZRN3-202ENST00000308537 MBD1Q9UIS9 605 aaPredicted RBP20.68■□□□□ 0.9
PDZRN3-202ENST00000308537 PCDHGA5Q9Y5G8 931 aa20.68■□□□□ 0.9
PDZRN3-202ENST00000308537 TCRBV21S2A2A0A5A6 115 aa20.67■□□□□ 0.9
PDZRN3-202ENST00000308537 PRR5-ARHGAP8B1AHC4 643 aa20.67■□□□□ 0.9
PDZRN3-202ENST00000308537 WASH3PC4AMC7 463 aa20.67■□□□□ 0.9
PDZRN3-202ENST00000308537 GDF9O60383 454 aa20.67■□□□□ 0.9
PDZRN3-202ENST00000308537 LATS1O95835 1130 aa20.67■□□□□ 0.9
PDZRN3-202ENST00000308537 ZNF806P0C7X5 589 aa20.67■□□□□ 0.9
PDZRN3-202ENST00000308537 PNMA6AP0CW24 399 aaPredicted RBP20.67■□□□□ 0.9
PDZRN3-202ENST00000308537 CLCN1P35523 988 aa20.67■□□□□ 0.9
PDZRN3-202ENST00000308537 ATXN1P54253 815 aaKnown RBP20.67■□□□□ 0.9
PDZRN3-202ENST00000308537 ARHGAP8P85298 464 aa20.67■□□□□ 0.9
PDZRN3-202ENST00000308537 EIF4EBP2Q13542 120 aaPredicted RBP20.67■□□□□ 0.9
PDZRN3-202ENST00000308537 PUM1Q14671 1186 aaKnown RBP eCLIP20.67■□□□□ 0.9
PDZRN3-202ENST00000308537 CCDC6Q16204 474 aa20.67■□□□□ 0.9
PDZRN3-202ENST00000308537 VWA3BQ502W6 1294 aa20.67■□□□□ 0.9
PDZRN3-202ENST00000308537 FAM133BQ5BKY9 247 aaKnown RBP20.67■□□□□ 0.9
PDZRN3-202ENST00000308537 BEND5Q7L4P6 421 aa20.67■□□□□ 0.9
PDZRN3-202ENST00000308537 ERMP1Q7Z2K6 904 aa20.67■□□□□ 0.9
PDZRN3-202ENST00000308537 DQX1Q8TE96 717 aaKnown RBP20.67■□□□□ 0.9
PDZRN3-202ENST00000308537 RLN3Q8WXF3 142 aa20.67■□□□□ 0.9
PDZRN3-202ENST00000308537 SLC39A13Q96H72 371 aa20.67■□□□□ 0.9
PDZRN3-202ENST00000308537 FCRL2Q96LA5 508 aaPredicted RBP20.67■□□□□ 0.9
PDZRN3-202ENST00000308537 FAM81BQ96LP2 452 aa20.67■□□□□ 0.9
PDZRN3-202ENST00000308537 TUBGCP2Q9BSJ2 902 aa20.67■□□□□ 0.9
PDZRN3-202ENST00000308537 SMOC1Q9H4F8 434 aa20.67■□□□□ 0.9
PDZRN3-202ENST00000308537 E5RJQ4 531 aa20.66■□□□□ 0.9
PDZRN3-202ENST00000308537 THAP12O43422 761 aa20.66■□□□□ 0.9
PDZRN3-202ENST00000308537 IGLV3-25P01717 112 aa20.66■□□□□ 0.9
PDZRN3-202ENST00000308537 HOXB2P14652 356 aa20.66■□□□□ 0.9
PDZRN3-202ENST00000308537 SLC6A4P31645 630 aa20.66■□□□□ 0.9
PDZRN3-202ENST00000308537 RING1Q06587 406 aa20.66■□□□□ 0.9
PDZRN3-202ENST00000308537 PDCLQ13371 301 aa20.66■□□□□ 0.9
PDZRN3-202ENST00000308537 SF3A2Q15428 464 aaKnown RBP20.66■□□□□ 0.9
PDZRN3-202ENST00000308537 USP39Q53GS9 565 aaKnown RBP20.66■□□□□ 0.9
PDZRN3-202ENST00000308537 CT47A1Q5JQC4 288 aaPredicted RBP20.66■□□□□ 0.9
PDZRN3-202ENST00000308537 ADGRF1Q5T601 910 aa20.66■□□□□ 0.9
PDZRN3-202ENST00000308537 SYPL2Q5VXT5 272 aa20.66■□□□□ 0.9
PDZRN3-202ENST00000308537 NADSYN1Q6IA69 706 aa20.66■□□□□ 0.9
PDZRN3-202ENST00000308537 TRMT11Q7Z4G4 463 aaKnown RBP20.66■□□□□ 0.9
PDZRN3-202ENST00000308537 HMGB4Q8WW32 186 aa20.66■□□□□ 0.9
PDZRN3-202ENST00000308537 MYEOVQ96EZ4 313 aa20.66■□□□□ 0.9
PDZRN3-202ENST00000308537 POLMQ9NP87 494 aaPredicted RBP20.66■□□□□ 0.9
PDZRN3-202ENST00000308537 CACNA2D2Q9NY47 1150 aa20.66■□□□□ 0.9
PDZRN3-202ENST00000308537 DNAJC12Q9UKB3 198 aa20.66■□□□□ 0.9
PDZRN3-202ENST00000308537 PCDHGC3Q9UN70 934 aa20.66■□□□□ 0.9
PDZRN3-202ENST00000308537 NAALADL1Q9UQQ1 740 aa20.66■□□□□ 0.9
PDZRN3-202ENST00000308537 BCLAF3A2AJT9 711 aaKnown RBP20.65■□□□□ 0.9
PDZRN3-202ENST00000308537 FOXN3O00409 490 aaPredicted RBP20.65■□□□□ 0.9
PDZRN3-202ENST00000308537 ALDH1A2O94788 518 aa20.65■□□□□ 0.9
Retrieved 100 of 20,778 RNA–protein pairs in 32.1 ms