RNA–Protein interactions for RNA: ENST00000308466.12

MUC4-201, Transcript of mucin 4, cell surface associated, humanhuman

TSL 1 (best)

Gene MUC4, Length 3,806 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MUC4-201ENST00000308466 TSPYL2Q9H2G4 693 aaPredicted RBP11.05□□□□□ -0.64
MUC4-201ENST00000308466 TUBGCP4Q9UGJ1 667 aa11.05□□□□□ -0.64
MUC4-201ENST00000308466 DFFAO00273 331 aa11.05□□□□□ -0.64
MUC4-201ENST00000308466 STAMBPO95630 424 aa11.05□□□□□ -0.64
MUC4-201ENST00000308466 ZCCHC18P0CG32 403 aa11.05□□□□□ -0.64
MUC4-201ENST00000308466 YY1P25490 414 aa11.05□□□□□ -0.64
MUC4-201ENST00000308466 ACADSBP45954 432 aa11.05□□□□□ -0.64
MUC4-201ENST00000308466 GBE1Q04446 702 aa11.05□□□□□ -0.64
MUC4-201ENST00000308466 ASPHQ12797 758 aa11.05□□□□□ -0.64
MUC4-201ENST00000308466 PPIL2Q13356 520 aa11.05□□□□□ -0.64
MUC4-201ENST00000308466 C1orf146Q5VVC0 180 aa11.05□□□□□ -0.64
MUC4-201ENST00000308466 SLC35B2Q8TB61 432 aa11.05□□□□□ -0.64
MUC4-201ENST00000308466 ZMAT2Q96NC0 199 aaKnown RBP11.05□□□□□ -0.64
MUC4-201ENST00000308466 ETNK2Q9NVF9 386 aa11.05□□□□□ -0.64
MUC4-201ENST00000308466 SIX4Q9UIU6 781 aa11.05□□□□□ -0.64
MUC4-201ENST00000308466 MTO1Q9Y2Z2 717 aaKnown RBP11.05□□□□□ -0.64
MUC4-201ENST00000308466 SMNDC1O75940 238 aaKnown RBP eCLIP11.04□□□□□ -0.64
MUC4-201ENST00000308466 ETS2P15036 469 aa11.04□□□□□ -0.64
MUC4-201ENST00000308466 GPD2P43304 727 aa11.04□□□□□ -0.64
MUC4-201ENST00000308466 BEX3Q00994 111 aa11.04□□□□□ -0.64
MUC4-201ENST00000308466 GHRHRQ02643 423 aa11.04□□□□□ -0.64
MUC4-201ENST00000308466 ACVR2BQ13705 512 aa11.04□□□□□ -0.64
MUC4-201ENST00000308466 SV2CQ496J9 727 aa11.04□□□□□ -0.64
MUC4-201ENST00000308466 MSS51Q4VC12 460 aa11.04□□□□□ -0.64
MUC4-201ENST00000308466 LACTB2Q53H82 288 aaPredicted RBP11.04□□□□□ -0.64
MUC4-201ENST00000308466 GNASQ5JWF2 1037 aa11.04□□□□□ -0.64
MUC4-201ENST00000308466 ILDR2Q71H61 639 aa11.04□□□□□ -0.64
MUC4-201ENST00000308466 CCNYL1Q8N7R7 359 aa11.04□□□□□ -0.64
MUC4-201ENST00000308466 RNF139Q8WU17 664 aa11.04□□□□□ -0.64
MUC4-201ENST00000308466 EDEM1Q92611 657 aa11.04□□□□□ -0.64
MUC4-201ENST00000308466 LGMNQ99538 433 aa11.04□□□□□ -0.64
MUC4-201ENST00000308466 NACA2Q9H009 215 aa11.04□□□□□ -0.64
MUC4-201ENST00000308466 XAB2Q9HCS7 855 aaKnown RBP11.04□□□□□ -0.64
MUC4-201ENST00000308466 VTA1Q9NP79 307 aa11.04□□□□□ -0.64
MUC4-201ENST00000308466 STOML1Q9UBI4 398 aa11.04□□□□□ -0.64
MUC4-201ENST00000308466 WDR27A2RRH5 827 aa11.04□□□□□ -0.64
MUC4-201ENST00000308466 TM9SF1O15321 606 aa11.04□□□□□ -0.64
MUC4-201ENST00000308466 ZBTB48P10074 688 aaPredicted RBP11.04□□□□□ -0.64
MUC4-201ENST00000308466 ABCG1P45844 678 aa11.04□□□□□ -0.64
MUC4-201ENST00000308466 RPL10AP62906 217 aaKnown RBP11.04□□□□□ -0.64
MUC4-201ENST00000308466 PDK1Q15118 436 aa11.04□□□□□ -0.64
MUC4-201ENST00000308466 TAF1CQ15572 869 aaPredicted RBP11.04□□□□□ -0.64
MUC4-201ENST00000308466 SH3D19Q5HYK7 790 aa11.04□□□□□ -0.64
MUC4-201ENST00000308466 PLEKHH3Q7Z736 793 aa11.04□□□□□ -0.64
MUC4-201ENST00000308466 PLD5Q8N7P1 536 aa11.04□□□□□ -0.64
MUC4-201ENST00000308466 MECRQ9BV79 373 aa11.04□□□□□ -0.64
MUC4-201ENST00000308466 XYLT2Q9H1B5 865 aa11.04□□□□□ -0.64
MUC4-201ENST00000308466 ABHD16BQ9H3Z7 469 aa11.04□□□□□ -0.64
MUC4-201ENST00000308466 NRDE2Q9H7Z3 1164 aa11.04□□□□□ -0.64
MUC4-201ENST00000308466 PLEKHA5Q9HAU0 1116 aa11.04□□□□□ -0.64
MUC4-201ENST00000308466 PCDH18Q9HCL0 1135 aa11.04□□□□□ -0.64
MUC4-201ENST00000308466 FNDC3AQ9Y2H6 1198 aaKnown RBP11.04□□□□□ -0.64
MUC4-201ENST00000308466 STARD13Q9Y3M8 1113 aa11.04□□□□□ -0.64
MUC4-201ENST00000308466 CLDN5O00501 218 aa11.04□□□□□ -0.64
MUC4-201ENST00000308466 LSM1O15116 133 aaKnown RBP11.04□□□□□ -0.64
MUC4-201ENST00000308466 EDF1O60869 148 aaKnown RBP11.04□□□□□ -0.64
MUC4-201ENST00000308466 UNC5CO95185 931 aa11.04□□□□□ -0.64
MUC4-201ENST00000308466 C22orf31O95567 290 aa11.04□□□□□ -0.64
MUC4-201ENST00000308466 MX2P20592 715 aa11.04□□□□□ -0.64
MUC4-201ENST00000308466 AQP5P55064 265 aa11.04□□□□□ -0.64
MUC4-201ENST00000308466 MRPS35P82673 323 aaKnown RBP11.04□□□□□ -0.64
MUC4-201ENST00000308466 ENPEPQ07075 957 aa11.04□□□□□ -0.64
MUC4-201ENST00000308466 THOC5Q13769 683 aaKnown RBP11.04□□□□□ -0.64
MUC4-201ENST00000308466 OASLQ15646 514 aaKnown RBP11.04□□□□□ -0.64
MUC4-201ENST00000308466 GRAMD4Q6IC98 578 aa11.04□□□□□ -0.64
MUC4-201ENST00000308466 LCA5Q86VQ0 697 aa11.04□□□□□ -0.64
MUC4-201ENST00000308466 TMCO5AQ8N6Q1 288 aa11.04□□□□□ -0.64
MUC4-201ENST00000308466 HASPINQ8TF76 798 aa11.04□□□□□ -0.64
MUC4-201ENST00000308466 PGAP2Q9UHJ9 254 aa11.04□□□□□ -0.64
MUC4-201ENST00000308466 RABGEF1Q9UJ41 708 aa11.04□□□□□ -0.64
MUC4-201ENST00000308466 GRID1Q9ULK0 1009 aa11.04□□□□□ -0.64
MUC4-201ENST00000308466 TMA7Q9Y2S6 64 aaKnown RBP11.04□□□□□ -0.64
MUC4-201ENST00000308466 UBR3Q6ZT12 1888 aa11.03□□□□□ -0.64
MUC4-201ENST00000308466 C2orf71A6NGG8 1288 aa11.03□□□□□ -0.64
MUC4-201ENST00000308466 SDR42E2A6NKP2 422 aa11.03□□□□□ -0.64
MUC4-201ENST00000308466 FESP07332 822 aa11.03□□□□□ -0.64
MUC4-201ENST00000308466 GOT1P17174 413 aa11.03□□□□□ -0.64
MUC4-201ENST00000308466 MGAT1P26572 445 aa11.03□□□□□ -0.64
MUC4-201ENST00000308466 MLH1P40692 756 aa11.03□□□□□ -0.64
MUC4-201ENST00000308466 MAGEA10P43363 369 aaPredicted RBP11.03□□□□□ -0.64
MUC4-201ENST00000308466 TKTL1P51854 596 aa11.03□□□□□ -0.64
MUC4-201ENST00000308466 ZNF252P-AS1Q0IIN9 211 aa11.03□□□□□ -0.64
MUC4-201ENST00000308466 NOMO1Q15155 1222 aa11.03□□□□□ -0.64
MUC4-201ENST00000308466 SLC44A4Q53GD3 710 aa11.03□□□□□ -0.64
MUC4-201ENST00000308466 LCLAT1Q6UWP7 414 aa11.03□□□□□ -0.64
MUC4-201ENST00000308466 PRPF39Q86UA1 669 aaKnown RBP11.03□□□□□ -0.64
MUC4-201ENST00000308466 PIGZQ86VD9 579 aa11.03□□□□□ -0.64
MUC4-201ENST00000308466 RNF135Q8IUD6 432 aa11.03□□□□□ -0.64
MUC4-201ENST00000308466 MCUQ8NE86 351 aa11.03□□□□□ -0.64
MUC4-201ENST00000308466 FNIP1Q8TF40 1166 aa11.03□□□□□ -0.64
MUC4-201ENST00000308466 HTR3CQ8WXA8 447 aa11.03□□□□□ -0.64
MUC4-201ENST00000308466 TBCBQ99426 244 aa11.03□□□□□ -0.64
MUC4-201ENST00000308466 EIF2AQ9BY44 585 aaKnown RBP11.03□□□□□ -0.64
MUC4-201ENST00000308466 FRMD8Q9BZ67 464 aaPredicted RBP11.03□□□□□ -0.64
MUC4-201ENST00000308466 MAF1Q9H063 256 aa11.03□□□□□ -0.64
MUC4-201ENST00000308466 PREBQ9HCU5 417 aa11.03□□□□□ -0.64
MUC4-201ENST00000308466 FBXO6Q9NRD1 293 aaPredicted RBP11.03□□□□□ -0.64
MUC4-201ENST00000308466 LGALS13Q9UHV8 139 aa11.03□□□□□ -0.64
MUC4-201ENST00000308466 CYTH4Q9UIA0 394 aa11.03□□□□□ -0.64
MUC4-201ENST00000308466 ADAMTS5Q9UNA0 930 aa11.03□□□□□ -0.64
Retrieved 100 of 20,778 RNA–protein pairs in 41 ms