RNA–Protein interactions for RNA: ENST00000301873.9

LTBP3-201, Transcript of latent transforming growth factor beta binding protein 3, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene LTBP3, Length 4,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LTBP3-201ENST00000301873 YBX3P16989 372 aaKnown RBP eCLIP21.34■■□□□ 1.01
LTBP3-201ENST00000301873 CDH2P19022 906 aaPredicted RBP21.34■■□□□ 1.01
LTBP3-201ENST00000301873 CNTFP26441 200 aa21.34■■□□□ 1.01
LTBP3-201ENST00000301873 ZACNQ401N2 412 aa21.34■■□□□ 1.01
LTBP3-201ENST00000301873 SLC9A9Q8IVB4 645 aa21.34■■□□□ 1.01
LTBP3-201ENST00000301873 TEKT4Q8WW24 435 aa21.34■■□□□ 1.01
LTBP3-201ENST00000301873 C16orf96A6NNT2 1141 aa21.34■■□□□ 1.01
LTBP3-201ENST00000301873 PBX1P40424 430 aa21.34■■□□□ 1.01
LTBP3-201ENST00000301873 CYLC2Q14093 348 aaPredicted RBP21.34■■□□□ 1.01
LTBP3-201ENST00000301873 RRP1BQ14684 758 aaKnown RBP21.34■■□□□ 1.01
LTBP3-201ENST00000301873 C16orf46Q6P387 395 aa21.34■■□□□ 1.01
LTBP3-201ENST00000301873 BNC2Q6ZN30 1099 aaPredicted RBP21.34■■□□□ 1.01
LTBP3-201ENST00000301873 NUDT18Q6ZVK8 323 aa21.34■■□□□ 1.01
LTBP3-201ENST00000301873 EFL1Q7Z2Z2 1120 aaKnown RBP21.34■■□□□ 1.01
LTBP3-201ENST00000301873 CCDC126Q96EE4 140 aa21.34■■□□□ 1.01
LTBP3-201ENST00000301873 VPS50Q96JG6 964 aa21.34■■□□□ 1.01
LTBP3-201ENST00000301873 VPS28Q9UK41 221 aa21.34■■□□□ 1.01
LTBP3-201ENST00000301873 PPP2R3BQ9Y5P8 575 aa21.34■■□□□ 1.01
LTBP3-201ENST00000301873 NCAM2O15394 837 aa21.34■■□□□ 1.01
LTBP3-201ENST00000301873 TNFSF9P41273 254 aa21.34■■□□□ 1.01
LTBP3-201ENST00000301873 OXCT1P55809 520 aa21.34■■□□□ 1.01
LTBP3-201ENST00000301873 SKOR1P84550 965 aa21.34■■□□□ 1.01
LTBP3-201ENST00000301873 AMPD2Q01433 879 aa21.34■■□□□ 1.01
LTBP3-201ENST00000301873 TMEM139Q8IV31 216 aa21.34■■□□□ 1.01
LTBP3-201ENST00000301873 VPS37AQ8NEZ2 397 aa21.34■■□□□ 1.01
LTBP3-201ENST00000301873 PTPRHQ9HD43 1115 aa21.34■■□□□ 1.01
LTBP3-201ENST00000301873 TAGLN3Q9UI15 199 aa21.34■■□□□ 1.01
LTBP3-201ENST00000301873 FGRP09769 529 aa21.33■■□□□ 1.01
LTBP3-201ENST00000301873 MBL2P11226 248 aaPredicted RBP21.33■■□□□ 1.01
LTBP3-201ENST00000301873 PLK1P53350 603 aa21.33■■□□□ 1.01
LTBP3-201ENST00000301873 CDH17Q12864 832 aa21.33■■□□□ 1.01
LTBP3-201ENST00000301873 VGLL4Q14135 290 aa21.33■■□□□ 1.01
LTBP3-201ENST00000301873 TCF7L2Q9NQB0 619 aa21.33■■□□□ 1.01
LTBP3-201ENST00000301873 LGALS2P05162 132 aa21.33■■□□□ 1.01
LTBP3-201ENST00000301873 HNRNPCP07910 306 aaKnown RBP eCLIP21.33■■□□□ 1.014e-10■■□□□ 14.1
LTBP3-201ENST00000301873 GJB1P08034 283 aa21.33■■□□□ 1.01
LTBP3-201ENST00000301873 IYDQ6PHW0 289 aa21.33■■□□□ 1.01
LTBP3-201ENST00000301873 ZCCHC9Q8N567 271 aaKnown RBP21.33■■□□□ 1.01
LTBP3-201ENST00000301873 TRPM5Q9NZQ8 1165 aa21.33■■□□□ 1.01
LTBP3-201ENST00000301873 BLOC1S6Q9UL45 172 aa21.33■■□□□ 1.01
LTBP3-201ENST00000301873 TRIM13O60858 407 aa21.33■■□□□ 1
LTBP3-201ENST00000301873 PPP1R11O60927 126 aaPredicted RBP21.33■■□□□ 1
LTBP3-201ENST00000301873 NFICP08651 508 aa21.33■■□□□ 1
LTBP3-201ENST00000301873 POLD3Q15054 466 aaPredicted RBP21.33■■□□□ 1
LTBP3-201ENST00000301873 DDI1Q8WTU0 396 aa21.33■■□□□ 1
LTBP3-201ENST00000301873 APBA2Q99767 749 aa21.33■■□□□ 1
LTBP3-201ENST00000301873 ULBP1Q9BZM6 244 aa21.33■■□□□ 1
LTBP3-201ENST00000301873 SMPD4Q9NXE4 827 aa21.33■■□□□ 1
LTBP3-201ENST00000301873 ALBP02768 609 aa21.32■■□□□ 1
LTBP3-201ENST00000301873 TUBP50607 506 aa21.32■■□□□ 1
LTBP3-201ENST00000301873 LLGL2Q6P1M3 1020 aa21.32■■□□□ 1
LTBP3-201ENST00000301873 ATXN2LQ8WWM7 1075 aaKnown RBP21.32■■□□□ 1
LTBP3-201ENST00000301873 SEMA4DQ92854 862 aa21.32■■□□□ 1
LTBP3-201ENST00000301873 TEKT2Q9UIF3 430 aa21.32■■□□□ 1
LTBP3-201ENST00000301873 RBP1P09455 135 aa21.32■■□□□ 1
LTBP3-201ENST00000301873 MMP14P50281 582 aa21.32■■□□□ 1
LTBP3-201ENST00000301873 CRADDP78560 199 aa21.32■■□□□ 1
LTBP3-201ENST00000301873 AUHQ13825 339 aaKnown RBP21.32■■□□□ 1
LTBP3-201ENST00000301873 TTC33Q6PID6 262 aaPredicted RBP21.32■■□□□ 1
LTBP3-201ENST00000301873 NPNTQ6UXI9 565 aa21.32■■□□□ 1
LTBP3-201ENST00000301873 TDRD5Q8NAT2 981 aaKnown RBP21.32■■□□□ 1
LTBP3-201ENST00000301873 USP13Q92995 863 aaPredicted RBP21.32■■□□□ 1
LTBP3-201ENST00000301873 EXOSC4Q9NPD3 245 aaKnown RBP21.32■■□□□ 1
LTBP3-201ENST00000301873 DRG1Q9Y295 367 aaKnown RBP21.32■■□□□ 1
LTBP3-201ENST00000301873 FKBP1AP62942 108 aaKnown RBP21.32■■□□□ 1
LTBP3-201ENST00000301873 UGCGQ16739 394 aa21.32■■□□□ 1
LTBP3-201ENST00000301873 URB1O60287 2271 aaKnown RBP21.32■■□□□ 1
LTBP3-201ENST00000301873 TBC1D4O60343 1298 aa21.32■■□□□ 1
LTBP3-201ENST00000301873 PLA2G6O60733 806 aa21.32■■□□□ 1
LTBP3-201ENST00000301873 GLP2RO95838 553 aa21.32■■□□□ 1
LTBP3-201ENST00000301873 DNAJB2P25686 324 aa21.32■■□□□ 1
LTBP3-201ENST00000301873 MZF1P28698 734 aaPredicted RBP21.32■■□□□ 1
LTBP3-201ENST00000301873 ZCWPW2Q504Y3 356 aa21.32■■□□□ 1
LTBP3-201ENST00000301873 PDPK2PQ6A1A2 396 aa21.32■■□□□ 1
LTBP3-201ENST00000301873 ZNF470Q6ECI4 717 aa21.32■■□□□ 1
LTBP3-201ENST00000301873 TLK2Q86UE8 772 aa21.32■■□□□ 1
LTBP3-201ENST00000301873 ZNF786Q8N393 782 aa21.32■■□□□ 1
LTBP3-201ENST00000301873 RAB42Q8N4Z0 105 aa21.32■■□□□ 1
LTBP3-201ENST00000301873 MRPS31Q92665 395 aaKnown RBP21.32■■□□□ 1
LTBP3-201ENST00000301873 PIF1Q9H611 641 aa21.32■■□□□ 1
LTBP3-201ENST00000301873 SERPINF2P08697 491 aa21.31■■□□□ 1
LTBP3-201ENST00000301873 BDNFP23560 247 aa21.31■■□□□ 1
LTBP3-201ENST00000301873 CD151P48509 253 aa21.31■■□□□ 1
LTBP3-201ENST00000301873 ITGB3BPQ13352 177 aaPredicted RBP21.31■■□□□ 1
LTBP3-201ENST00000301873 CAPSQ13938 189 aa21.31■■□□□ 1
LTBP3-201ENST00000301873 PPP4R4Q6NUP7 873 aa21.31■■□□□ 1
LTBP3-201ENST00000301873 CARNMT1Q8N4J0 409 aa21.31■■□□□ 1
LTBP3-201ENST00000301873 LRRN4Q8WUT4 740 aa21.31■■□□□ 1
LTBP3-201ENST00000301873 CLPBQ9H078 707 aa21.31■■□□□ 1
LTBP3-201ENST00000301873 TRIM45Q9H8W5 580 aaPredicted RBP21.31■■□□□ 1
LTBP3-201ENST00000301873 GPRC5DQ9NZD1 345 aa21.31■■□□□ 1
LTBP3-201ENST00000301873 PRR23AA6NEV1 266 aa21.31■■□□□ 1
LTBP3-201ENST00000301873 RHOCP08134 193 aa21.31■■□□□ 1
LTBP3-201ENST00000301873 USP17L7P0C7H9 530 aa21.31■■□□□ 1
LTBP3-201ENST00000301873 BEX3Q00994 111 aa21.31■■□□□ 1
LTBP3-201ENST00000301873 DSG1Q02413 1049 aa21.31■■□□□ 1
LTBP3-201ENST00000301873 CNGA2Q16280 664 aa21.31■■□□□ 1
LTBP3-201ENST00000301873 NBPF20Q3BBV1 942 aa21.31■■□□□ 1
LTBP3-201ENST00000301873 EEF1DP3Q658K8 133 aa21.31■■□□□ 1
LTBP3-201ENST00000301873 P3H2Q8IVL5 708 aa21.31■■□□□ 1
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms