RNA–Protein interactions for RNA: ENST00000301732.9

ABCA3-201, Transcript of ATP binding cassette subfamily A member 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ABCA3, Length 6,609 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ABCA3-201ENST00000301732 TBX20Q9UMR3 447 aa12.67□□□□□ -0.38
ABCA3-201ENST00000301732 FAM25EA8MYX2 175 aa12.67□□□□□ -0.38
ABCA3-201ENST00000301732 ENTPD5O75356 428 aa12.67□□□□□ -0.38
ABCA3-201ENST00000301732 B3GAT3O94766 335 aa12.67□□□□□ -0.38
ABCA3-201ENST00000301732 ERVK-10P10266 1014 aa12.67□□□□□ -0.38
ABCA3-201ENST00000301732 HK2P52789 917 aa12.67□□□□□ -0.38
ABCA3-201ENST00000301732 CEBPGP53567 150 aa12.67□□□□□ -0.38
ABCA3-201ENST00000301732 STX4Q12846 297 aa12.67□□□□□ -0.38
ABCA3-201ENST00000301732 ZKSCAN4Q969J2 545 aaPredicted RBP12.67□□□□□ -0.38
ABCA3-201ENST00000301732 SMPD4Q9NXE4 827 aa12.67□□□□□ -0.38
ABCA3-201ENST00000301732 OGDHLQ9ULD0 1010 aa12.67□□□□□ -0.38
ABCA3-201ENST00000301732 BTN3A3O00478 584 aa12.67□□□□□ -0.38
ABCA3-201ENST00000301732 RIPK2O43353 540 aa12.67□□□□□ -0.38
ABCA3-201ENST00000301732 TPD52L2O43399 206 aaKnown RBP12.67□□□□□ -0.38
ABCA3-201ENST00000301732 EXTL3O43909 919 aa12.67□□□□□ -0.38
ABCA3-201ENST00000301732 DGAT1O75907 488 aa12.67□□□□□ -0.38
ABCA3-201ENST00000301732 CDH8P55286 799 aa12.67□□□□□ -0.38
ABCA3-201ENST00000301732 FAAP100Q0VG06 881 aa12.67□□□□□ -0.38
ABCA3-201ENST00000301732 GRB10Q13322 594 aa12.67□□□□□ -0.38
ABCA3-201ENST00000301732 CAMK2GQ13555 558 aaPredicted RBP12.67□□□□□ -0.38
ABCA3-201ENST00000301732 HIST2H2ACQ16777 129 aaPredicted RBP12.67□□□□□ -0.38
ABCA3-201ENST00000301732 HIST2H2AA3Q6FI13 130 aa12.67□□□□□ -0.38
ABCA3-201ENST00000301732 ZNF621Q6ZSS3 439 aa12.67□□□□□ -0.38
ABCA3-201ENST00000301732 C16orf59Q7L2K0 433 aa12.67□□□□□ -0.38
ABCA3-201ENST00000301732 SH3TC2Q8TF17 1288 aa12.67□□□□□ -0.38
ABCA3-201ENST00000301732 NIF3L1Q9GZT8 377 aa12.67□□□□□ -0.38
ABCA3-201ENST00000301732 FZD1Q9UP38 647 aa12.67□□□□□ -0.38
ABCA3-201ENST00000301732 SIK3Q9Y2K2 1263 aa12.67□□□□□ -0.38
ABCA3-201ENST00000301732 SDR42E2A6NKP2 422 aa12.66□□□□□ -0.38
ABCA3-201ENST00000301732 KBTBD13C9JR72 458 aa12.66□□□□□ -0.38
ABCA3-201ENST00000301732 CENPCQ03188 943 aa12.66□□□□□ -0.38
ABCA3-201ENST00000301732 PUDPQ08623 228 aa12.66□□□□□ -0.38
ABCA3-201ENST00000301732 TRAF3Q13114 568 aa12.66□□□□□ -0.38
ABCA3-201ENST00000301732 SLC25A24Q6NUK1 477 aa12.66□□□□□ -0.38
ABCA3-201ENST00000301732 TAF2Q6P1X5 1199 aa12.66□□□□□ -0.38
ABCA3-201ENST00000301732 NEDD1Q8NHV4 660 aa12.66□□□□□ -0.38
ABCA3-201ENST00000301732 RAET1EQ8TD07 263 aa12.66□□□□□ -0.38
ABCA3-201ENST00000301732 TAS1R2Q8TE23 839 aa12.66□□□□□ -0.38
ABCA3-201ENST00000301732 OXNAD1Q96HP4 312 aaPredicted RBP12.66□□□□□ -0.38
ABCA3-201ENST00000301732 SPACA7Q96KW9 195 aa12.66□□□□□ -0.38
ABCA3-201ENST00000301732 BTBD10Q9BSF8 475 aa12.66□□□□□ -0.38
ABCA3-201ENST00000301732 ACTR8Q9H981 624 aa12.66□□□□□ -0.38
ABCA3-201ENST00000301732 SEMA4BQ9NPR2 832 aaPredicted RBP12.66□□□□□ -0.38
ABCA3-201ENST00000301732 TCF7L2Q9NQB0 619 aa12.66□□□□□ -0.38
ABCA3-201ENST00000301732 MIEF1Q9NQG6 463 aa12.66□□□□□ -0.38
ABCA3-201ENST00000301732 TUBE1Q9UJT0 475 aa12.66□□□□□ -0.38
ABCA3-201ENST00000301732 HLA-DQA2P01906 255 aa12.66□□□□□ -0.38
ABCA3-201ENST00000301732 ARP10275 920 aa12.66□□□□□ -0.38
ABCA3-201ENST00000301732 ADRA1DP25100 572 aa12.66□□□□□ -0.38
ABCA3-201ENST00000301732 EFNA5P52803 228 aa12.66□□□□□ -0.38
ABCA3-201ENST00000301732 XKR3Q5GH77 459 aa12.66□□□□□ -0.38
ABCA3-201ENST00000301732 LPCAT1Q8NF37 534 aa12.66□□□□□ -0.38
ABCA3-201ENST00000301732 COL15A1P39059 1388 aa12.66□□□□□ -0.38
ABCA3-201ENST00000301732 TMEM94Q12767 1356 aa12.66□□□□□ -0.38
ABCA3-201ENST00000301732 PLOD3O60568 738 aa12.66□□□□□ -0.38
ABCA3-201ENST00000301732 SEC22BO75396 215 aa12.66□□□□□ -0.38
ABCA3-201ENST00000301732 ATP4AP20648 1035 aa12.66□□□□□ -0.38
ABCA3-201ENST00000301732 FASP25445 335 aa12.66□□□□□ -0.38
ABCA3-201ENST00000301732 GSTT1P30711 240 aa12.66□□□□□ -0.38
ABCA3-201ENST00000301732 SLC34A1Q06495 639 aa12.66□□□□□ -0.38
ABCA3-201ENST00000301732 ORC2Q13416 577 aaPredicted RBP12.66□□□□□ -0.38
ABCA3-201ENST00000301732 FNBP1LQ5T0N5 605 aa12.66□□□□□ -0.38
ABCA3-201ENST00000301732 CDC42EP5Q6NZY7 148 aa12.66□□□□□ -0.38
ABCA3-201ENST00000301732 HIPK1Q86Z02 1210 aa12.66□□□□□ -0.38
ABCA3-201ENST00000301732 MICALL2Q8IY33 904 aa12.66□□□□□ -0.38
ABCA3-201ENST00000301732 TNIP2Q8NFZ5 429 aa12.66□□□□□ -0.38
ABCA3-201ENST00000301732 TRIM62Q9BVG3 475 aa12.66□□□□□ -0.38
ABCA3-201ENST00000301732 POMKQ9H5K3 350 aa12.66□□□□□ -0.38
ABCA3-201ENST00000301732 SYNMO15061 1565 aa12.66□□□□□ -0.38
ABCA3-201ENST00000301732 ERVK-7P63135 1459 aa12.66□□□□□ -0.38
ABCA3-201ENST00000301732 PTCH1Q13635 1447 aa12.66□□□□□ -0.38
ABCA3-201ENST00000301732 CNTNAP5Q8WYK1 1306 aa12.66□□□□□ -0.38
ABCA3-201ENST00000301732 C2orf81A6NN90 581 aa12.66□□□□□ -0.38
ABCA3-201ENST00000301732 KRT36O76013 467 aa12.66□□□□□ -0.38
ABCA3-201ENST00000301732 RGS20O76081 388 aa12.66□□□□□ -0.38
ABCA3-201ENST00000301732 H2AFXP16104 143 aaPredicted RBP12.66□□□□□ -0.38
ABCA3-201ENST00000301732 HNF4AP41235 474 aa12.66□□□□□ -0.38
ABCA3-201ENST00000301732 PDIA5Q14554 519 aa12.66□□□□□ -0.38
ABCA3-201ENST00000301732 TOMM20Q15388 145 aa12.66□□□□□ -0.38
ABCA3-201ENST00000301732 PKN1Q16512 942 aa12.66□□□□□ -0.38
ABCA3-201ENST00000301732 PIGKQ92643 395 aa12.66□□□□□ -0.38
ABCA3-201ENST00000301732 TRIM63Q969Q1 353 aa12.66□□□□□ -0.38
ABCA3-201ENST00000301732 COL26A1Q96A83 441 aa12.66□□□□□ -0.38
ABCA3-201ENST00000301732 AP4E1Q9UPM8 1137 aa12.66□□□□□ -0.38
ABCA3-201ENST00000301732 PPP2R3BQ9Y5P8 575 aa12.66□□□□□ -0.38
ABCA3-201ENST00000301732 TISP43B9A030 160 aa12.66□□□□□ -0.38
ABCA3-201ENST00000301732 SIN3BO75182 1162 aa12.66□□□□□ -0.38
ABCA3-201ENST00000301732 CYP2C9P11712 490 aa12.66□□□□□ -0.38
ABCA3-201ENST00000301732 AKAP5P24588 427 aa12.66□□□□□ -0.38
ABCA3-201ENST00000301732 MYL6P60660 151 aa12.66□□□□□ -0.38
ABCA3-201ENST00000301732 GRIK3Q13003 919 aa12.66□□□□□ -0.38
ABCA3-201ENST00000301732 AMIGO2Q86SJ2 522 aa12.66□□□□□ -0.38
ABCA3-201ENST00000301732 DHFR2Q86XF0 187 aa12.66□□□□□ -0.38
ABCA3-201ENST00000301732 OMDQ99983 421 aa12.66□□□□□ -0.38
ABCA3-201ENST00000301732 CIPCQ9C0C6 399 aa12.66□□□□□ -0.38
ABCA3-201ENST00000301732 FAM50BQ9Y247 325 aa12.66□□□□□ -0.38
ABCA3-201ENST00000301732 CCDC154A6NI56 674 aa12.65□□□□□ -0.38
ABCA3-201ENST00000301732 MSH4O15457 936 aa12.65□□□□□ -0.38
ABCA3-201ENST00000301732 ZC3H11AO75152 810 aaKnown RBP eCLIP12.65□□□□□ -0.38
ABCA3-201ENST00000301732 PODNQ7Z5L7 613 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms