RNA–Protein interactions for RNA: ENST00000301019.8

CDT1-201, Transcript of chromatin licensing and DNA replication factor 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDT1, Length 3,240 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDT1-201ENST00000301019 COL4A1P02462 1669 aa14.87□□□□□ -0.03
CDT1-201ENST00000301019 SDR42E2A6NKP2 422 aa14.87□□□□□ -0.03
CDT1-201ENST00000301019 ZBBXA8MT70 800 aa14.87□□□□□ -0.03
CDT1-201ENST00000301019 SLC16A4O15374 487 aa14.87□□□□□ -0.03
CDT1-201ENST00000301019 CST8O60676 142 aa14.87□□□□□ -0.03
CDT1-201ENST00000301019 CSDE1O75534 798 aaKnown RBP14.87□□□□□ -0.03
CDT1-201ENST00000301019 RNASEH2AO75792 299 aaKnown RBP14.87□□□□□ -0.03
CDT1-201ENST00000301019 CCR10P46092 362 aa14.87□□□□□ -0.03
CDT1-201ENST00000301019 CDK9P50750 372 aaKnown RBP14.87□□□□□ -0.03
CDT1-201ENST00000301019 MFAP3P55082 362 aa14.87□□□□□ -0.03
CDT1-201ENST00000301019 ADAM17P78536 824 aa14.87□□□□□ -0.03
CDT1-201ENST00000301019 SBK1Q52WX2 424 aa14.87□□□□□ -0.03
CDT1-201ENST00000301019 CYP4A22Q5TCH4 519 aa14.87□□□□□ -0.03
CDT1-201ENST00000301019 IL23RQ5VWK5 629 aa14.87□□□□□ -0.03
CDT1-201ENST00000301019 KYAT3Q6YP21 454 aaKnown RBP14.87□□□□□ -0.03
CDT1-201ENST00000301019 FAM71AQ8IYT1 594 aa14.87□□□□□ -0.03
CDT1-201ENST00000301019 PCDH20Q8N6Y1 951 aaKnown RBP14.87□□□□□ -0.03
CDT1-201ENST00000301019 NSMCE3Q96MG7 304 aa14.87□□□□□ -0.03
CDT1-201ENST00000301019 BTBD9Q96Q07 612 aa14.87□□□□□ -0.03
CDT1-201ENST00000301019 PNMA6FA0A0J9YX94 578 aa14.86□□□□□ -0.03
CDT1-201ENST00000301019 AP3B1O00203 1094 aa14.86□□□□□ -0.03
CDT1-201ENST00000301019 NRP1O14786 923 aa14.86□□□□□ -0.03
CDT1-201ENST00000301019 MCF2P10911 925 aa14.86□□□□□ -0.03
CDT1-201ENST00000301019 CYP2C9P11712 490 aa14.86□□□□□ -0.03
CDT1-201ENST00000301019 NR4A2P43354 598 aa14.86□□□□□ -0.03
CDT1-201ENST00000301019 TPTEP56180 551 aa14.86□□□□□ -0.03
CDT1-201ENST00000301019 MORF4L2Q15014 288 aa14.86□□□□□ -0.03
CDT1-201ENST00000301019 Q3C1V9 767 aa14.86□□□□□ -0.03
CDT1-201ENST00000301019 SNRNP48Q6IEG0 339 aaKnown RBP14.86□□□□□ -0.03
CDT1-201ENST00000301019 SPNS2Q8IVW8 549 aa14.86□□□□□ -0.03
CDT1-201ENST00000301019 ZC3H7AQ8IWR0 971 aaKnown RBP14.86□□□□□ -0.03
CDT1-201ENST00000301019 NETO2Q8NC67 525 aa14.86□□□□□ -0.03
CDT1-201ENST00000301019 RMND5BQ96G75 393 aaPredicted RBP14.86□□□□□ -0.03
CDT1-201ENST00000301019 VPS50Q96JG6 964 aa14.86□□□□□ -0.03
CDT1-201ENST00000301019 KLHL32Q96NJ5 620 aa14.86□□□□□ -0.03
CDT1-201ENST00000301019 OSBPL10Q9BXB5 764 aa14.86□□□□□ -0.03
CDT1-201ENST00000301019 EPB41L1Q9H4G0 881 aa14.86□□□□□ -0.03
CDT1-201ENST00000301019 PALMDQ9NP74 551 aa14.86□□□□□ -0.03
CDT1-201ENST00000301019 GMNNO75496 209 aa14.86□□□□□ -0.03
CDT1-201ENST00000301019 TGDSO95455 350 aa14.86□□□□□ -0.03
CDT1-201ENST00000301019 ESRRBO95718 433 aa14.86□□□□□ -0.03
CDT1-201ENST00000301019 PABPC1P11940 636 aaKnown RBP14.86□□□□□ -0.03
CDT1-201ENST00000301019 GZMAP12544 262 aa14.86□□□□□ -0.03
CDT1-201ENST00000301019 IREB2P48200 963 aaKnown RBP14.86□□□□□ -0.03
CDT1-201ENST00000301019 PPM1JQ5JR12 505 aa14.86□□□□□ -0.03
CDT1-201ENST00000301019 CASC4Q6P4E1 433 aa14.86□□□□□ -0.03
CDT1-201ENST00000301019 DEPDC4Q8N2C3 294 aa14.86□□□□□ -0.03
CDT1-201ENST00000301019 PDCD6IPQ8WUM4 868 aaKnown RBP14.86□□□□□ -0.03
CDT1-201ENST00000301019 MAML3Q96JK9 1138 aa14.86□□□□□ -0.03
CDT1-201ENST00000301019 TSPAN18Q96SJ8 248 aa14.86□□□□□ -0.03
CDT1-201ENST00000301019 CALN1Q9BXU9 219 aa14.86□□□□□ -0.03
CDT1-201ENST00000301019 RIOX1Q9H6W3 641 aa14.86□□□□□ -0.03
CDT1-201ENST00000301019 UTP6Q9NYH9 597 aaKnown RBP14.86□□□□□ -0.03
CDT1-201ENST00000301019 HSPBP1Q9NZL4 362 aa14.86□□□□□ -0.03
CDT1-201ENST00000301019 SLC27A5Q9Y2P5 690 aa14.86□□□□□ -0.03
CDT1-201ENST00000301019 WDR64B1ANS9 1081 aa14.85□□□□□ -0.03
CDT1-201ENST00000301019 PROSCO94903 275 aa14.85□□□□□ -0.03
CDT1-201ENST00000301019 ARSAP15289 507 aa14.85□□□□□ -0.03
CDT1-201ENST00000301019 HADHBP55084 474 aaKnown RBP14.85□□□□□ -0.03
CDT1-201ENST00000301019 SPIRE1Q08AE8 756 aa14.85□□□□□ -0.03
CDT1-201ENST00000301019 RALGDSQ12967 914 aa14.85□□□□□ -0.03
CDT1-201ENST00000301019 MAVSQ7Z434 540 aa14.85□□□□□ -0.03
CDT1-201ENST00000301019 AHI1Q8N157 1196 aa14.85□□□□□ -0.03
CDT1-201ENST00000301019 LZTR1Q8N653 840 aa14.85□□□□□ -0.03
CDT1-201ENST00000301019 DDI1Q8WTU0 396 aa14.85□□□□□ -0.03
CDT1-201ENST00000301019 STARD8Q92502 1023 aa14.85□□□□□ -0.03
CDT1-201ENST00000301019 CAMKK2Q96RR4 588 aa14.85□□□□□ -0.03
CDT1-201ENST00000301019 RANBP9Q96S59 729 aa14.85□□□□□ -0.03
CDT1-201ENST00000301019 GBA3Q9H227 469 aa14.85□□□□□ -0.03
CDT1-201ENST00000301019 NOL11Q9H8H0 719 aaKnown RBP14.85□□□□□ -0.03
CDT1-201ENST00000301019 AP4E1Q9UPM8 1137 aa14.85□□□□□ -0.03
CDT1-201ENST00000301019 PLLPQ9Y342 182 aa14.85□□□□□ -0.03
CDT1-201ENST00000301019 GPSM3Q9Y4H4 160 aa14.85□□□□□ -0.03
CDT1-201ENST00000301019 ANKRD12Q6UB98 2062 aa14.85□□□□□ -0.03
CDT1-201ENST00000301019 KRBA1A5PL33 1030 aa14.85□□□□□ -0.03
CDT1-201ENST00000301019 TRIM64CA6NLI5 447 aa14.85□□□□□ -0.03
CDT1-201ENST00000301019 CCNT2O60583 730 aaKnown RBP14.85□□□□□ -0.03
CDT1-201ENST00000301019 FBXO21O94952 628 aa14.85□□□□□ -0.03
CDT1-201ENST00000301019 SAT1P21673 171 aa14.85□□□□□ -0.03
CDT1-201ENST00000301019 ESRRGP62508 458 aa14.85□□□□□ -0.03
CDT1-201ENST00000301019 CLEC16AQ2KHT3 1053 aa14.85□□□□□ -0.03
CDT1-201ENST00000301019 TMEM270Q6UE05 265 aa14.85□□□□□ -0.03
CDT1-201ENST00000301019 FLAD1Q8NFF5 587 aa14.85□□□□□ -0.03
CDT1-201ENST00000301019 MTG1Q9BT17 334 aaPredicted RBP14.85□□□□□ -0.03
CDT1-201ENST00000301019 GCOM2Q9BZD3 368 aaPredicted RBP14.85□□□□□ -0.03
CDT1-201ENST00000301019 MIR1-1HGQ9H1L0 117 aa14.85□□□□□ -0.03
CDT1-201ENST00000301019 GMPR2Q9P2T1 348 aaKnown RBP14.85□□□□□ -0.03
CDT1-201ENST00000301019 DNAJB4Q9UDY4 337 aa14.85□□□□□ -0.03
CDT1-201ENST00000301019 DENRO43583 198 aaKnown RBP14.85□□□□□ -0.03
CDT1-201ENST00000301019 CFBP00751 764 aa14.85□□□□□ -0.03
CDT1-201ENST00000301019 ALDH2P05091 517 aa14.85□□□□□ -0.03
CDT1-201ENST00000301019 LDHCP07864 332 aa14.85□□□□□ -0.03
CDT1-201ENST00000301019 COX4I1P13073 169 aa14.85□□□□□ -0.03
CDT1-201ENST00000301019 EEF1B2P24534 225 aaKnown RBP14.85□□□□□ -0.03
CDT1-201ENST00000301019 HMOX2P30519 316 aa14.85□□□□□ -0.03
CDT1-201ENST00000301019 SLC1A6P48664 564 aa14.85□□□□□ -0.03
CDT1-201ENST00000301019 NUP107P57740 925 aa14.85□□□□□ -0.03
CDT1-201ENST00000301019 RPS8P62241 208 aaKnown RBP14.85□□□□□ -0.03
CDT1-201ENST00000301019 TAF5Q15542 800 aa14.85□□□□□ -0.03
CDT1-201ENST00000301019 PITRM1Q5JRX3 1037 aa14.85□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms