RNA–Protein interactions for RNA: ENST00000299333.7

SCN3B-201, Transcript of sodium voltage-gated channel beta subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SCN3B, Length 5,665 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCN3B-201ENST00000299333 CBX3Q13185 183 aa15.23■□□□□ 0.03
SCN3B-201ENST00000299333 TTLL9Q3SXZ7 439 aa15.23■□□□□ 0.03
SCN3B-201ENST00000299333 ZNF605Q86T29 641 aa15.23■□□□□ 0.03
SCN3B-201ENST00000299333 NEDD1Q8NHV4 660 aa15.23■□□□□ 0.03
SCN3B-201ENST00000299333 SAR1AQ9NR31 198 aa15.23■□□□□ 0.03
SCN3B-201ENST00000299333 RABL2AQ9UBK7 228 aaPredicted RBP15.23■□□□□ 0.03
SCN3B-201ENST00000299333 RAB21Q9UL25 225 aa15.23■□□□□ 0.03
SCN3B-201ENST00000299333 PADI4Q9UM07 663 aa15.23■□□□□ 0.03
SCN3B-201ENST00000299333 PREX2Q70Z35 1606 aa15.23■□□□□ 0.03
SCN3B-201ENST00000299333 NLRP1Q9C000 1473 aa15.23■□□□□ 0.03
SCN3B-201ENST00000299333 ADCY10Q96PN6 1610 aa15.23■□□□□ 0.03
SCN3B-201ENST00000299333 AXIN1O15169 862 aa15.23■□□□□ 0.03
SCN3B-201ENST00000299333 RBP1P09455 135 aa15.23■□□□□ 0.03
SCN3B-201ENST00000299333 CDH3P22223 829 aa15.23■□□□□ 0.03
SCN3B-201ENST00000299333 MAPKAPK2P49137 400 aa15.23■□□□□ 0.03
SCN3B-201ENST00000299333 NR6A1Q15406 480 aa15.23■□□□□ 0.03
SCN3B-201ENST00000299333 SPIRE2Q8WWL2 714 aa15.23■□□□□ 0.03
SCN3B-201ENST00000299333 PHF21BQ96EK2 531 aa15.23■□□□□ 0.03
SCN3B-201ENST00000299333 NMRK1Q9NWW6 199 aa15.23■□□□□ 0.03
SCN3B-201ENST00000299333 SLC2A4P14672 509 aa15.23■□□□□ 0.03
SCN3B-201ENST00000299333 MYL12AP19105 171 aa15.23■□□□□ 0.03
SCN3B-201ENST00000299333 DNAAF5Q86Y56 855 aa15.23■□□□□ 0.03
SCN3B-201ENST00000299333 SKA1Q96BD8 255 aa15.23■□□□□ 0.03
SCN3B-201ENST00000299333 THAP1Q9NVV9 213 aa15.23■□□□□ 0.03
SCN3B-201ENST00000299333 RAD54BQ9Y620 910 aa15.23■□□□□ 0.03
SCN3B-201ENST00000299333 H3BN98 237 aa15.23■□□□□ 0.03
SCN3B-201ENST00000299333 DSG3P32926 999 aa15.23■□□□□ 0.03
SCN3B-201ENST00000299333 GALNT6Q8NCL4 622 aa15.23■□□□□ 0.03
SCN3B-201ENST00000299333 HPS1Q92902 700 aa15.23■□□□□ 0.03
SCN3B-201ENST00000299333 EPB41L1Q9H4G0 881 aa15.23■□□□□ 0.03
SCN3B-201ENST00000299333 PIDD1Q9HB75 910 aa15.23■□□□□ 0.03
SCN3B-201ENST00000299333 GPATCH2LQ9NWQ4 482 aa15.23■□□□□ 0.03
SCN3B-201ENST00000299333 MAP3K20Q9NYL2 800 aaKnown RBP15.23■□□□□ 0.03
SCN3B-201ENST00000299333 ERAP1Q9NZ08 941 aa15.23■□□□□ 0.03
SCN3B-201ENST00000299333 KCND2Q9NZV8 630 aa15.23■□□□□ 0.03
SCN3B-201ENST00000299333 SNX8Q9Y5X2 465 aa15.23■□□□□ 0.03
SCN3B-201ENST00000299333 PRR23CQ6ZRP0 262 aa15.22■□□□□ 0.03
SCN3B-201ENST00000299333 ZCCHC23Q6ZST2 131 aa15.22■□□□□ 0.03
SCN3B-201ENST00000299333 ACAD9Q9H845 621 aa15.22■□□□□ 0.03
SCN3B-201ENST00000299333 ARPC4-TTLL3A0A0A6YYG9 625 aa15.22■□□□□ 0.03
SCN3B-201ENST00000299333 ERI2A8K979 691 aaKnown RBP15.22■□□□□ 0.03
SCN3B-201ENST00000299333 FAPQ12884 760 aa15.22■□□□□ 0.03
SCN3B-201ENST00000299333 ZDHHC13Q8IUH4 622 aa15.22■□□□□ 0.03
SCN3B-201ENST00000299333 C8orf59Q8N0T1 100 aaPredicted RBP15.22■□□□□ 0.03
SCN3B-201ENST00000299333 KLHL32Q96NJ5 620 aa15.22■□□□□ 0.03
SCN3B-201ENST00000299333 ACOX2Q99424 681 aa15.22■□□□□ 0.03
SCN3B-201ENST00000299333 PNMA3Q9UL41 463 aa15.22■□□□□ 0.03
SCN3B-201ENST00000299333 ADGRL3Q9HAR2 1447 aa15.22■□□□□ 0.03
SCN3B-201ENST00000299333 FLT1P17948 1338 aa15.22■□□□□ 0.03
SCN3B-201ENST00000299333 AP5Z1O43299 807 aa15.22■□□□□ 0.03
SCN3B-201ENST00000299333 EXTL3O43909 919 aa15.22■□□□□ 0.03
SCN3B-201ENST00000299333 KRT36O76013 467 aa15.22■□□□□ 0.03
SCN3B-201ENST00000299333 CLTBP09497 229 aa15.22■□□□□ 0.03
SCN3B-201ENST00000299333 ST8SIA6P61647 398 aa15.22■□□□□ 0.03
SCN3B-201ENST00000299333 MPP3Q13368 585 aa15.22■□□□□ 0.03
SCN3B-201ENST00000299333 XKR3Q5GH77 459 aa15.22■□□□□ 0.03
SCN3B-201ENST00000299333 KLHL24Q6TFL4 600 aa15.22■□□□□ 0.03
SCN3B-201ENST00000299333 EGFL6Q8IUX8 553 aa15.22■□□□□ 0.03
SCN3B-201ENST00000299333 C12orf4Q9NQ89 552 aa15.22■□□□□ 0.03
SCN3B-201ENST00000299333 C2orf81A6NN90 581 aa15.22■□□□□ 0.03
SCN3B-201ENST00000299333 AREL1O15033 823 aa15.22■□□□□ 0.03
SCN3B-201ENST00000299333 EIF2S3P41091 472 aaKnown RBP15.22■□□□□ 0.03
SCN3B-201ENST00000299333 ARL4DP49703 201 aa15.22■□□□□ 0.03
SCN3B-201ENST00000299333 PTENP60484 403 aa15.22■□□□□ 0.03
SCN3B-201ENST00000299333 CDC73Q6P1J9 531 aa15.22■□□□□ 0.03
SCN3B-201ENST00000299333 AENQ8WTP8 325 aaKnown RBP15.22■□□□□ 0.03
SCN3B-201ENST00000299333 APOPT1Q96IL0 206 aa15.22■□□□□ 0.03
SCN3B-201ENST00000299333 MNTQ99583 582 aa15.22■□□□□ 0.03
SCN3B-201ENST00000299333 CINPQ9BW66 212 aaPredicted RBP15.22■□□□□ 0.03
SCN3B-201ENST00000299333 CCDC167Q9P0B6 97 aa15.22■□□□□ 0.03
SCN3B-201ENST00000299333 RPS6KB2Q9UBS0 482 aa15.22■□□□□ 0.03
SCN3B-201ENST00000299333 PRKAA1Q13131 559 aa15.21■□□□□ 0.03
SCN3B-201ENST00000299333 EMC2Q15006 297 aa15.21■□□□□ 0.03
SCN3B-201ENST00000299333 SPOCD1Q6ZMY3 1216 aa15.21■□□□□ 0.03
SCN3B-201ENST00000299333 MAGEE2Q8TD90 523 aaPredicted RBP15.21■□□□□ 0.03
SCN3B-201ENST00000299333 UGT2B28Q9BY64 529 aa15.21■□□□□ 0.03
SCN3B-201ENST00000299333 PIGUQ9H490 435 aa15.21■□□□□ 0.03
SCN3B-201ENST00000299333 SSNA1O43805 119 aa15.21■□□□□ 0.03
SCN3B-201ENST00000299333 WARSP23381 471 aaKnown RBP15.21■□□□□ 0.03
SCN3B-201ENST00000299333 ORC1Q13415 861 aa15.21■□□□□ 0.03
SCN3B-201ENST00000299333 FAM9CQ8IZT9 166 aa15.21■□□□□ 0.03
SCN3B-201ENST00000299333 JMJD4Q9H9V9 463 aa15.21■□□□□ 0.03
SCN3B-201ENST00000299333 METP08581 1390 aa15.21■□□□□ 0.03
SCN3B-201ENST00000299333 CCDC154A6NI56 674 aa15.21■□□□□ 0.03
SCN3B-201ENST00000299333 M0QYT0 321 aa15.21■□□□□ 0.03
SCN3B-201ENST00000299333 CTDNEP1O95476 244 aa15.21■□□□□ 0.03
SCN3B-201ENST00000299333 RPL21P46778 160 aaKnown RBP15.21■□□□□ 0.03
SCN3B-201ENST00000299333 KCNJ2P63252 427 aa15.21■□□□□ 0.03
SCN3B-201ENST00000299333 BTN3A2P78410 334 aa15.21■□□□□ 0.03
SCN3B-201ENST00000299333 CUL2Q13617 745 aa15.21■□□□□ 0.03
SCN3B-201ENST00000299333 WRNIP1Q96S55 665 aa15.21■□□□□ 0.03
SCN3B-201ENST00000299333 DPY30Q9C005 99 aa15.21■□□□□ 0.03
SCN3B-201ENST00000299333 AAR2Q9Y312 384 aaKnown RBP15.21■□□□□ 0.03
SCN3B-201ENST00000299333 FGFR2P21802 821 aa15.21■□□□□ 0.03
SCN3B-201ENST00000299333 IL12AP29459 219 aa15.21■□□□□ 0.03
SCN3B-201ENST00000299333 GRIK3Q13003 919 aa15.21■□□□□ 0.03
SCN3B-201ENST00000299333 GPR162Q16538 588 aa15.21■□□□□ 0.03
SCN3B-201ENST00000299333 CCNG2Q16589 344 aa15.21■□□□□ 0.03
SCN3B-201ENST00000299333 RASSF6Q6ZTQ3 369 aa15.21■□□□□ 0.03
SCN3B-201ENST00000299333 ELOA2Q8IYF1 753 aaPredicted RBP15.21■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms