RNA–Protein interactions for RNA: ENST00000296581.10

LSM6-201, Transcript of LSM6 homolog, U6 small nuclear RNA and mRNA degradation associated, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene LSM6, Length 2,259 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM6-201ENST00000296581 ANKRD65E5RJM6 399 aa16.12■□□□□ 0.17
LSM6-201ENST00000296581 VNN2O95498 520 aa16.12■□□□□ 0.17
LSM6-201ENST00000296581 RBP3P10745 1247 aa16.12■□□□□ 0.17
LSM6-201ENST00000296581 CPB1P15086 417 aa16.12■□□□□ 0.17
LSM6-201ENST00000296581 CXCR3P49682 368 aa16.12■□□□□ 0.17
LSM6-201ENST00000296581 GPR15P49685 360 aa16.12■□□□□ 0.17
LSM6-201ENST00000296581 ITGA8P53708 1063 aa16.12■□□□□ 0.17
LSM6-201ENST00000296581 WDR5P61964 334 aaKnown RBP16.12■□□□□ 0.17
LSM6-201ENST00000296581 DDR2Q16832 855 aa16.12■□□□□ 0.17
LSM6-201ENST00000296581 USP41Q3LFD5 358 aa16.12■□□□□ 0.17
LSM6-201ENST00000296581 EFHC2Q5JST6 749 aa16.12■□□□□ 0.17
LSM6-201ENST00000296581 CFAP58Q5T655 872 aa16.12■□□□□ 0.17
LSM6-201ENST00000296581 SCD5Q86SK9 330 aa16.12■□□□□ 0.17
LSM6-201ENST00000296581 PRUNE1Q86TP1 453 aa16.12■□□□□ 0.17
LSM6-201ENST00000296581 NUP93Q8N1F7 819 aa16.12■□□□□ 0.17
LSM6-201ENST00000296581 DQX1Q8TE96 717 aaKnown RBP16.12■□□□□ 0.17
LSM6-201ENST00000296581 FAM204AQ9H8W3 233 aa16.12■□□□□ 0.17
LSM6-201ENST00000296581 ABCC13Q9NSE7 274 aa16.12■□□□□ 0.17
LSM6-201ENST00000296581 COX16Q9P0S2 106 aa16.12■□□□□ 0.17
LSM6-201ENST00000296581 SCML2Q9UQR0 700 aa16.12■□□□□ 0.17
LSM6-201ENST00000296581 SGK1O00141 431 aa16.12■□□□□ 0.17
LSM6-201ENST00000296581 HSPA1AP0DMV8 641 aaKnown RBP16.12■□□□□ 0.17
LSM6-201ENST00000296581 HSPA1BP0DMV9 641 aaKnown RBP16.12■□□□□ 0.17
LSM6-201ENST00000296581 ARL4AP40617 200 aa16.12■□□□□ 0.17
LSM6-201ENST00000296581 VPS41P49754 854 aa16.12■□□□□ 0.17
LSM6-201ENST00000296581 EIF4EBP2Q13542 120 aaPredicted RBP16.12■□□□□ 0.17
LSM6-201ENST00000296581 TAC4Q86UU9 113 aa16.12■□□□□ 0.17
LSM6-201ENST00000296581 TTC9BQ8N6N2 239 aa16.12■□□□□ 0.17
LSM6-201ENST00000296581 ZIM3Q96PE6 472 aa16.12■□□□□ 0.17
LSM6-201ENST00000296581 FBXO44Q9H4M3 255 aa16.12■□□□□ 0.17
LSM6-201ENST00000296581 TMPRSS4Q9NRS4 437 aa16.12■□□□□ 0.17
LSM6-201ENST00000296581 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP16.12■□□□□ 0.17
LSM6-201ENST00000296581 MTRRQ9UBK8 725 aa16.12■□□□□ 0.17
LSM6-201ENST00000296581 BACE2Q9Y5Z0 518 aa16.12■□□□□ 0.17
LSM6-201ENST00000296581 GREB1Q4ZG55 1949 aa16.11■□□□□ 0.17
LSM6-201ENST00000296581 BAIAP3O94812 1187 aa16.11■□□□□ 0.17
LSM6-201ENST00000296581 SYF2O95926 243 aaKnown RBP16.11■□□□□ 0.17
LSM6-201ENST00000296581 ZSCAN5DPP0CG00 497 aa16.11■□□□□ 0.17
LSM6-201ENST00000296581 ETS1P14921 441 aa16.11■□□□□ 0.17
LSM6-201ENST00000296581 GOT1P17174 413 aa16.11■□□□□ 0.17
LSM6-201ENST00000296581 GGCXP38435 758 aa16.11■□□□□ 0.17
LSM6-201ENST00000296581 IZUMO3Q5VZ72 239 aa16.11■□□□□ 0.17
LSM6-201ENST00000296581 SLC8B1Q6J4K2 584 aa16.11■□□□□ 0.17
LSM6-201ENST00000296581 C1orf228Q6PIY5 440 aa16.11■□□□□ 0.17
LSM6-201ENST00000296581 KCNT2Q6UVM3 1135 aa16.11■□□□□ 0.17
LSM6-201ENST00000296581 PRSS55Q6UWB4 352 aaPredicted RBP16.11■□□□□ 0.17
LSM6-201ENST00000296581 RNF19BQ6ZMZ0 732 aa16.11■□□□□ 0.17
LSM6-201ENST00000296581 CMTR2Q8IYT2 770 aaKnown RBP16.11■□□□□ 0.17
LSM6-201ENST00000296581 ANLNQ9NQW6 1124 aa16.11■□□□□ 0.17
LSM6-201ENST00000296581 VPS18Q9P253 973 aa16.11■□□□□ 0.17
LSM6-201ENST00000296581 ANAPC5Q9UJX4 755 aa16.11■□□□□ 0.17
LSM6-201ENST00000296581 PTPRSQ13332 1948 aa16.11■□□□□ 0.17
LSM6-201ENST00000296581 ZNF638Q14966 1978 aaKnown RBP16.11■□□□□ 0.17
LSM6-201ENST00000296581 FAM92AA1XBS5 289 aa16.11■□□□□ 0.17
LSM6-201ENST00000296581 H3BRJ5 948 aa16.11■□□□□ 0.17
LSM6-201ENST00000296581 I6L893 689 aaPredicted RBP16.11■□□□□ 0.17
LSM6-201ENST00000296581 DNALI1O14645 258 aaPredicted RBP16.11■□□□□ 0.17
LSM6-201ENST00000296581 HAPLN1P10915 354 aaPredicted RBP16.11■□□□□ 0.17
LSM6-201ENST00000296581 GDF10P55107 478 aa16.11■□□□□ 0.17
LSM6-201ENST00000296581 ARPP19P56211 112 aa16.11■□□□□ 0.17
LSM6-201ENST00000296581 ROR1Q01973 937 aa16.11■□□□□ 0.17
LSM6-201ENST00000296581 IFRD2Q12894 506 aaPredicted RBP16.11■□□□□ 0.17
LSM6-201ENST00000296581 SEMA3BQ13214 749 aa16.11■□□□□ 0.17
LSM6-201ENST00000296581 P3H1Q32P28 736 aa16.11■□□□□ 0.17
LSM6-201ENST00000296581 SDHAF4Q5VUM1 108 aa16.11■□□□□ 0.17
LSM6-201ENST00000296581 BTBD8Q5XKL5 378 aa16.11■□□□□ 0.17
LSM6-201ENST00000296581 HIBCHQ6NVY1 386 aaPredicted RBP16.11■□□□□ 0.17
LSM6-201ENST00000296581 UNC45BQ8IWX7 931 aa16.11■□□□□ 0.17
LSM6-201ENST00000296581 SLC39A11Q8N1S5 342 aa16.11■□□□□ 0.17
LSM6-201ENST00000296581 RNF139Q8WU17 664 aa16.11■□□□□ 0.17
LSM6-201ENST00000296581 RSAD2Q8WXG1 361 aa16.11■□□□□ 0.17
LSM6-201ENST00000296581 SPATA17Q96L03 361 aa16.11■□□□□ 0.17
LSM6-201ENST00000296581 SH3GL2Q99962 352 aa16.11■□□□□ 0.17
LSM6-201ENST00000296581 ADAM7Q9H2U9 754 aa16.11■□□□□ 0.17
LSM6-201ENST00000296581 C10orf88Q9H8K7 445 aa16.11■□□□□ 0.17
LSM6-201ENST00000296581 NMUR1Q9HB89 426 aa16.11■□□□□ 0.17
LSM6-201ENST00000296581 A0A087WUV0 522 aaPredicted RBP16.1■□□□□ 0.17
LSM6-201ENST00000296581 STIP1P31948 543 aaKnown RBP16.1■□□□□ 0.17
LSM6-201ENST00000296581 NR2C2P49116 596 aa16.1■□□□□ 0.17
LSM6-201ENST00000296581 PGFP49763 221 aa16.1■□□□□ 0.17
LSM6-201ENST00000296581 SLMAPQ14BN4 828 aa16.1■□□□□ 0.17
LSM6-201ENST00000296581 ARL13BQ3SXY8 428 aa16.1■□□□□ 0.17
LSM6-201ENST00000296581 NCBP2-AS2Q69YL0 99 aa16.1■□□□□ 0.17
LSM6-201ENST00000296581 TMCO2Q7Z6W1 182 aaPredicted RBP16.1■□□□□ 0.17
LSM6-201ENST00000296581 MON1AQ86VX9 555 aa16.1■□□□□ 0.17
LSM6-201ENST00000296581 FBXO22Q8NEZ5 403 aa16.1■□□□□ 0.17
LSM6-201ENST00000296581 ZNF558Q96NG5 402 aa16.1■□□□□ 0.17
LSM6-201ENST00000296581 CRISPLD1Q9H336 500 aa16.1■□□□□ 0.17
LSM6-201ENST00000296581 SMOC2Q9H3U7 446 aa16.1■□□□□ 0.17
LSM6-201ENST00000296581 ARHGEF4Q9NR80 690 aa16.1■□□□□ 0.17
LSM6-201ENST00000296581 AAASQ9NRG9 546 aa16.1■□□□□ 0.17
LSM6-201ENST00000296581 ATP8A1Q9Y2Q0 1164 aa16.1■□□□□ 0.17
LSM6-201ENST00000296581 CDY1Q9Y6F8 540 aa16.1■□□□□ 0.17
LSM6-201ENST00000296581 NDC80O14777 642 aa16.1■□□□□ 0.17
LSM6-201ENST00000296581 IRAK2O43187 625 aa16.1■□□□□ 0.17
LSM6-201ENST00000296581 IFNB1P01574 187 aa16.1■□□□□ 0.17
LSM6-201ENST00000296581 AMPD1P23109 780 aa16.1■□□□□ 0.17
LSM6-201ENST00000296581 PMS2P54278 862 aa16.1■□□□□ 0.17
LSM6-201ENST00000296581 GPS1Q13098 491 aa16.1■□□□□ 0.17
LSM6-201ENST00000296581 XRCC4Q13426 336 aa16.1■□□□□ 0.17
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms